Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.257 120.640 104.049 1.00 44.35 O
ATOM 2 P C A2023 34.314 119.769 105.011 1.00 42.30 P
ATOM 3 OP1 C A2023 32.973 119.727 104.407 1.00 42.88 O
ATOM 4 OP2 C A2023 34.472 120.308 106.383 1.00 45.90 O
ATOM 5 O5' C A2023 34.956 118.310 104.983 1.00 41.46 O
ATOM 6 C5' C A2023 34.419 117.275 104.141 1.00 38.49 C
ATOM 7 C4' C A2023 34.808 115.915 104.667 1.00 37.92 C
ATOM 8 O4' C A2023 36.241 115.725 104.555 1.00 36.39 O
ATOM 9 C3' C A2023 34.490 115.701 106.137 1.00 38.12 C
ATOM 10 O3' C A2023 33.158 115.230 106.282 1.00 39.55 O
ATOM 11 C2' C A2023 35.510 114.653 106.552 1.00 37.78 C
ATOM 12 O2' C A2023 35.115 113.350 106.200 1.00 39.33 O
ATOM 13 C1' C A2023 36.724 115.058 105.710 1.00 37.85 C
ATOM 14 N1 C A2023 37.671 115.958 106.402 1.00 39.23 N
ATOM 15 C2 C A2023 38.497 115.436 107.411 1.00 40.27 C
ATOM 16 O2 C A2023 38.375 114.242 107.738 1.00 37.32 O
ATOM 17 N3 C A2023 39.400 116.252 108.009 1.00 41.72 N
ATOM 18 C4 C A2023 39.479 117.538 107.651 1.00 40.50 C
ATOM 19 N4 C A2023 40.378 118.309 108.270 1.00 39.86 N
ATOM 20 C5 C A2023 38.639 118.091 106.647 1.00 38.36 C
ATOM 21 C6 C A2023 37.760 117.279 106.057 1.00 37.41 C
ATOM 22 P U A2024 32.181 115.909 107.359 1.00 43.48 P
ATOM 23 OP1 U A2024 30.802 115.489 106.985 1.00 45.22 O
ATOM 24 OP2 U A2024 32.500 117.355 107.488 1.00 44.16 O
ATOM 25 O5' U A2024 32.569 115.199 108.726 1.00 41.01 O
TER
ATOM 1 O3' G B2021 40.338 123.441 107.349 1.00 43.52 O
ATOM 2 P U B2022 40.184 121.931 106.826 1.00 43.38 P
ATOM 3 OP1 U B2022 39.794 121.103 107.985 1.00 42.64 O
ATOM 4 OP2 U B2022 41.397 121.581 106.065 1.00 44.10 O
ATOM 5 O5' U B2022 38.976 121.987 105.788 1.00 43.67 O
ATOM 6 C5' U B2022 37.686 122.490 106.163 1.00 42.87 C
ATOM 7 C4' U B2022 36.704 122.318 105.023 1.00 44.78 C
ATOM 8 O4' U B2022 37.075 123.193 103.916 1.00 46.64 O
ATOM 9 C3' U B2022 36.598 120.908 104.436 1.00 45.18 C
ATOM 10 O3' U B2022 35.257 120.640 104.049 1.00 44.35 O
ATOM 11 C2' U B2022 37.480 120.993 103.194 1.00 45.43 C
ATOM 12 O2' U B2022 37.143 120.085 102.163 1.00 45.57 O
ATOM 13 C1' U B2022 37.213 122.422 102.733 1.00 45.30 C
ATOM 14 N1 U B2022 38.326 122.945 101.925 1.00 44.56 N
ATOM 15 C2 U B2022 38.061 123.283 100.607 1.00 44.05 C
ATOM 16 O2 U B2022 36.955 123.227 100.122 1.00 41.22 O
ATOM 17 N3 U B2022 39.153 123.691 99.880 1.00 45.11 N
ATOM 18 C4 U B2022 40.451 123.806 100.327 1.00 42.93 C
ATOM 19 O4 U B2022 41.328 124.163 99.542 1.00 42.73 O
ATOM 20 C5 U B2022 40.641 123.481 101.709 1.00 42.05 C
ATOM 21 C6 U B2022 39.601 123.073 102.443 1.00 42.41 C
ATOM 22 P C B2023 34.314 119.769 105.011 1.00 42.30 P
ATOM 23 OP1 C B2023 32.973 119.727 104.407 1.00 42.88 O
ATOM 24 OP2 C B2023 34.472 120.308 106.383 1.00 45.90 O
ATOM 25 O5' C B2023 34.956 118.310 104.983 1.00 41.46 O
TER
ATOM 2 P C A2023 34.314 119.769 105.011 1.00 42.30 P
ATOM 3 OP1 C A2023 32.973 119.727 104.407 1.00 42.88 O
ATOM 4 OP2 C A2023 34.472 120.308 106.383 1.00 45.90 O
ATOM 5 O5' C A2023 34.956 118.310 104.983 1.00 41.46 O
ATOM 6 C5' C A2023 34.419 117.275 104.141 1.00 38.49 C
ATOM 7 C4' C A2023 34.808 115.915 104.667 1.00 37.92 C
ATOM 8 O4' C A2023 36.241 115.725 104.555 1.00 36.39 O
ATOM 9 C3' C A2023 34.490 115.701 106.137 1.00 38.12 C
ATOM 10 O3' C A2023 33.158 115.230 106.282 1.00 39.55 O
ATOM 11 C2' C A2023 35.510 114.653 106.552 1.00 37.78 C
ATOM 12 O2' C A2023 35.115 113.350 106.200 1.00 39.33 O
ATOM 13 C1' C A2023 36.724 115.058 105.710 1.00 37.85 C
ATOM 14 N1 C A2023 37.671 115.958 106.402 1.00 39.23 N
ATOM 15 C2 C A2023 38.497 115.436 107.411 1.00 40.27 C
ATOM 16 O2 C A2023 38.375 114.242 107.738 1.00 37.32 O
ATOM 17 N3 C A2023 39.400 116.252 108.009 1.00 41.72 N
ATOM 18 C4 C A2023 39.479 117.538 107.651 1.00 40.50 C
ATOM 19 N4 C A2023 40.378 118.309 108.270 1.00 39.86 N
ATOM 20 C5 C A2023 38.639 118.091 106.647 1.00 38.36 C
ATOM 21 C6 C A2023 37.760 117.279 106.057 1.00 37.41 C
ATOM 22 P U A2024 32.181 115.909 107.359 1.00 43.48 P
ATOM 23 OP1 U A2024 30.802 115.489 106.985 1.00 45.22 O
ATOM 24 OP2 U A2024 32.500 117.355 107.488 1.00 44.16 O
ATOM 25 O5' U A2024 32.569 115.199 108.726 1.00 41.01 O
TER
ATOM 1 O3' G B2021 40.338 123.441 107.349 1.00 43.52 O
ATOM 2 P U B2022 40.184 121.931 106.826 1.00 43.38 P
ATOM 3 OP1 U B2022 39.794 121.103 107.985 1.00 42.64 O
ATOM 4 OP2 U B2022 41.397 121.581 106.065 1.00 44.10 O
ATOM 5 O5' U B2022 38.976 121.987 105.788 1.00 43.67 O
ATOM 6 C5' U B2022 37.686 122.490 106.163 1.00 42.87 C
ATOM 7 C4' U B2022 36.704 122.318 105.023 1.00 44.78 C
ATOM 8 O4' U B2022 37.075 123.193 103.916 1.00 46.64 O
ATOM 9 C3' U B2022 36.598 120.908 104.436 1.00 45.18 C
ATOM 10 O3' U B2022 35.257 120.640 104.049 1.00 44.35 O
ATOM 11 C2' U B2022 37.480 120.993 103.194 1.00 45.43 C
ATOM 12 O2' U B2022 37.143 120.085 102.163 1.00 45.57 O
ATOM 13 C1' U B2022 37.213 122.422 102.733 1.00 45.30 C
ATOM 14 N1 U B2022 38.326 122.945 101.925 1.00 44.56 N
ATOM 15 C2 U B2022 38.061 123.283 100.607 1.00 44.05 C
ATOM 16 O2 U B2022 36.955 123.227 100.122 1.00 41.22 O
ATOM 17 N3 U B2022 39.153 123.691 99.880 1.00 45.11 N
ATOM 18 C4 U B2022 40.451 123.806 100.327 1.00 42.93 C
ATOM 19 O4 U B2022 41.328 124.163 99.542 1.00 42.73 O
ATOM 20 C5 U B2022 40.641 123.481 101.709 1.00 42.05 C
ATOM 21 C6 U B2022 39.601 123.073 102.443 1.00 42.41 C
ATOM 22 P C B2023 34.314 119.769 105.011 1.00 42.30 P
ATOM 23 OP1 C B2023 32.973 119.727 104.407 1.00 42.88 O
ATOM 24 OP2 C B2023 34.472 120.308 106.383 1.00 45.90 O
ATOM 25 O5' C B2023 34.956 118.310 104.983 1.00 41.46 O
TER
Atoms:
C2: (38.497,115.436,107.411)
OP1: (32.973,119.727,104.407)
OP2: (34.472,120.308,106.383)
C4: (39.479,117.538,107.651)
O5': (34.956,118.310,104.983)
C3': (34.490,115.701,106.137)
C1': (36.724,115.058,105.710)
O4': (36.241,115.725,104.555)
C5': (34.419,117.275,104.141)
P: (34.314,119.769,105.011)
O2: (38.375,114.242,107.738)
C4': (34.808,115.915,104.667)
C2': (35.510,114.653,106.552)
O2': (35.115,113.350,106.200)
N1: (37.671,115.958,106.402)
N3: (39.400,116.252,108.009)
N4: (40.378,118.309,108.270)
C6: (37.760,117.279,106.057)
C5: (38.639,118.091,106.647)
O3': (33.158,115.230,106.282)
OP1: (32.973,119.727,104.407)
OP2: (34.472,120.308,106.383)
C4: (39.479,117.538,107.651)
O5': (34.956,118.310,104.983)
C3': (34.490,115.701,106.137)
C1': (36.724,115.058,105.710)
O4': (36.241,115.725,104.555)
C5': (34.419,117.275,104.141)
P: (34.314,119.769,105.011)
O2: (38.375,114.242,107.738)
C4': (34.808,115.915,104.667)
C2': (35.510,114.653,106.552)
O2': (35.115,113.350,106.200)
N1: (37.671,115.958,106.402)
N3: (39.400,116.252,108.009)
N4: (40.378,118.309,108.270)
C6: (37.760,117.279,106.057)
C5: (38.639,118.091,106.647)
O3': (33.158,115.230,106.282)
C4: (40.451,123.806,100.327)
N3: (39.153,123.691,99.880)
OP1: (39.794,121.103,107.985)
OP2: (41.397,121.581,106.065)
C2: (38.061,123.283,100.607)
C1': (37.213,122.422,102.733)
C3': (36.598,120.908,104.436)
O5': (38.976,121.987,105.788)
O4': (37.075,123.193,103.916)
C5': (37.686,122.490,106.163)
P: (40.184,121.931,106.826)
C4': (36.704,122.318,105.023)
C2': (37.480,120.993,103.194)
O2': (37.143,120.085,102.163)
N1: (38.326,122.945,101.925)
O4: (41.328,124.163,99.542)
O2: (36.955,123.227,100.122)
C6: (39.601,123.073,102.443)
C5: (40.641,123.481,101.709)
O3': (35.257,120.640,104.049)
N3: (39.153,123.691,99.880)
OP1: (39.794,121.103,107.985)
OP2: (41.397,121.581,106.065)
C2: (38.061,123.283,100.607)
C1': (37.213,122.422,102.733)
C3': (36.598,120.908,104.436)
O5': (38.976,121.987,105.788)
O4': (37.075,123.193,103.916)
C5': (37.686,122.490,106.163)
P: (40.184,121.931,106.826)
C4': (36.704,122.318,105.023)
C2': (37.480,120.993,103.194)
O2': (37.143,120.085,102.163)
N1: (38.326,122.945,101.925)
O4: (41.328,124.163,99.542)
O2: (36.955,123.227,100.122)
C6: (39.601,123.073,102.443)
C5: (40.641,123.481,101.709)
O3': (35.257,120.640,104.049)
Image (generated by PyMOL):