Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOG:A38:A9
Extra
PDB:
ATOM 1 O3' C A 37 21.733 18.234 10.352 1.00 36.45 O
ATOM 2 P C A 38 22.496 19.436 11.113 1.00 36.49 P
ATOM 3 OP1 C A 38 21.507 20.297 11.811 1.00 38.32 O
ATOM 4 OP2 C A 38 23.457 20.044 10.153 1.00 35.32 O
ATOM 5 O5' C A 38 23.347 18.688 12.231 1.00 36.16 O
ATOM 6 C5' C A 38 23.033 18.848 13.597 1.00 34.15 C
ATOM 7 C4' C A 38 22.791 17.509 14.254 1.00 33.76 C
ATOM 8 O4' C A 38 22.027 16.597 13.419 1.00 31.91 O
ATOM 9 C3' C A 38 23.976 16.631 14.613 1.00 33.05 C
ATOM 10 O3' C A 38 24.780 17.197 15.654 1.00 34.73 O
ATOM 11 C2' C A 38 23.224 15.385 15.064 1.00 32.52 C
ATOM 12 O2' C A 38 22.568 15.565 16.303 1.00 32.60 O
ATOM 13 C1' C A 38 22.137 15.293 13.986 1.00 31.55 C
ATOM 14 N1 C A 38 22.484 14.304 12.948 1.00 28.82 N
ATOM 15 C2 C A 38 22.354 12.959 13.269 1.00 29.59 C
ATOM 16 O2 C A 38 21.912 12.658 14.391 1.00 28.03 O
ATOM 17 N3 C A 38 22.708 12.015 12.355 1.00 29.08 N
ATOM 18 C4 C A 38 23.159 12.386 11.156 1.00 29.06 C
ATOM 19 N4 C A 38 23.489 11.424 10.287 1.00 27.94 N
ATOM 20 C5 C A 38 23.286 13.761 10.794 1.00 29.31 C
ATOM 21 C6 C A 38 22.937 14.678 11.713 1.00 29.00 C
ATOM 22 P G A 39 26.231 16.560 16.002 1.00 34.47 P
ATOM 23 OP1 G A 39 26.880 17.468 16.973 1.00 35.42 O
ATOM 24 OP2 G A 39 26.926 16.228 14.741 1.00 34.70 O
ATOM 25 O5' G A 39 25.893 15.216 16.777 1.00 33.01 O
TER
ATOM 1 O3' A B 8 21.662 13.464 7.465 1.00 33.45 O
ATOM 2 P U B 9 23.167 13.234 6.923 1.00 34.24 P
ATOM 3 OP1 U B 9 23.657 11.880 7.303 1.00 33.84 O
ATOM 4 OP2 U B 9 23.950 14.436 7.343 1.00 35.23 O
ATOM 5 O5' U B 9 23.013 13.365 5.341 1.00 34.85 O
ATOM 6 C5' U B 9 23.109 12.241 4.474 1.00 36.54 C
ATOM 7 C4' U B 9 22.562 12.602 3.106 1.00 37.81 C
ATOM 8 O4' U B 9 21.167 13.019 3.235 1.00 37.87 O
ATOM 9 C3' U B 9 23.230 13.795 2.438 1.00 37.94 C
ATOM 10 O3' U B 9 24.426 13.431 1.747 1.00 39.96 O
ATOM 11 C2' U B 9 22.146 14.259 1.474 1.00 37.81 C
ATOM 12 O2' U B 9 22.046 13.448 0.318 1.00 37.42 O
ATOM 13 C1' U B 9 20.897 14.087 2.334 1.00 36.75 C
ATOM 14 N1 U B 9 20.544 15.291 3.106 1.00 36.42 N
ATOM 15 C2 U B 9 19.919 16.334 2.433 1.00 36.46 C
ATOM 16 O2 U B 9 19.664 16.302 1.242 1.00 37.45 O
ATOM 17 N3 U B 9 19.604 17.423 3.206 1.00 35.87 N
ATOM 18 C4 U B 9 19.846 17.585 4.554 1.00 35.55 C
ATOM 19 O4 U B 9 19.538 18.646 5.101 1.00 34.94 O
ATOM 20 C5 U B 9 20.496 16.473 5.179 1.00 35.62 C
ATOM 21 C6 U B 9 20.816 15.389 4.450 1.00 36.75 C
ATOM 22 P C B 10 25.531 14.561 1.425 1.00 40.15 P
ATOM 23 OP1 C B 10 26.727 13.894 0.856 1.00 40.62 O
ATOM 24 OP2 C B 10 25.661 15.381 2.656 1.00 41.33 O
ATOM 25 O5' C B 10 24.855 15.493 0.319 1.00 39.83 O
TER
ATOM 2 P C A 38 22.496 19.436 11.113 1.00 36.49 P
ATOM 3 OP1 C A 38 21.507 20.297 11.811 1.00 38.32 O
ATOM 4 OP2 C A 38 23.457 20.044 10.153 1.00 35.32 O
ATOM 5 O5' C A 38 23.347 18.688 12.231 1.00 36.16 O
ATOM 6 C5' C A 38 23.033 18.848 13.597 1.00 34.15 C
ATOM 7 C4' C A 38 22.791 17.509 14.254 1.00 33.76 C
ATOM 8 O4' C A 38 22.027 16.597 13.419 1.00 31.91 O
ATOM 9 C3' C A 38 23.976 16.631 14.613 1.00 33.05 C
ATOM 10 O3' C A 38 24.780 17.197 15.654 1.00 34.73 O
ATOM 11 C2' C A 38 23.224 15.385 15.064 1.00 32.52 C
ATOM 12 O2' C A 38 22.568 15.565 16.303 1.00 32.60 O
ATOM 13 C1' C A 38 22.137 15.293 13.986 1.00 31.55 C
ATOM 14 N1 C A 38 22.484 14.304 12.948 1.00 28.82 N
ATOM 15 C2 C A 38 22.354 12.959 13.269 1.00 29.59 C
ATOM 16 O2 C A 38 21.912 12.658 14.391 1.00 28.03 O
ATOM 17 N3 C A 38 22.708 12.015 12.355 1.00 29.08 N
ATOM 18 C4 C A 38 23.159 12.386 11.156 1.00 29.06 C
ATOM 19 N4 C A 38 23.489 11.424 10.287 1.00 27.94 N
ATOM 20 C5 C A 38 23.286 13.761 10.794 1.00 29.31 C
ATOM 21 C6 C A 38 22.937 14.678 11.713 1.00 29.00 C
ATOM 22 P G A 39 26.231 16.560 16.002 1.00 34.47 P
ATOM 23 OP1 G A 39 26.880 17.468 16.973 1.00 35.42 O
ATOM 24 OP2 G A 39 26.926 16.228 14.741 1.00 34.70 O
ATOM 25 O5' G A 39 25.893 15.216 16.777 1.00 33.01 O
TER
ATOM 1 O3' A B 8 21.662 13.464 7.465 1.00 33.45 O
ATOM 2 P U B 9 23.167 13.234 6.923 1.00 34.24 P
ATOM 3 OP1 U B 9 23.657 11.880 7.303 1.00 33.84 O
ATOM 4 OP2 U B 9 23.950 14.436 7.343 1.00 35.23 O
ATOM 5 O5' U B 9 23.013 13.365 5.341 1.00 34.85 O
ATOM 6 C5' U B 9 23.109 12.241 4.474 1.00 36.54 C
ATOM 7 C4' U B 9 22.562 12.602 3.106 1.00 37.81 C
ATOM 8 O4' U B 9 21.167 13.019 3.235 1.00 37.87 O
ATOM 9 C3' U B 9 23.230 13.795 2.438 1.00 37.94 C
ATOM 10 O3' U B 9 24.426 13.431 1.747 1.00 39.96 O
ATOM 11 C2' U B 9 22.146 14.259 1.474 1.00 37.81 C
ATOM 12 O2' U B 9 22.046 13.448 0.318 1.00 37.42 O
ATOM 13 C1' U B 9 20.897 14.087 2.334 1.00 36.75 C
ATOM 14 N1 U B 9 20.544 15.291 3.106 1.00 36.42 N
ATOM 15 C2 U B 9 19.919 16.334 2.433 1.00 36.46 C
ATOM 16 O2 U B 9 19.664 16.302 1.242 1.00 37.45 O
ATOM 17 N3 U B 9 19.604 17.423 3.206 1.00 35.87 N
ATOM 18 C4 U B 9 19.846 17.585 4.554 1.00 35.55 C
ATOM 19 O4 U B 9 19.538 18.646 5.101 1.00 34.94 O
ATOM 20 C5 U B 9 20.496 16.473 5.179 1.00 35.62 C
ATOM 21 C6 U B 9 20.816 15.389 4.450 1.00 36.75 C
ATOM 22 P C B 10 25.531 14.561 1.425 1.00 40.15 P
ATOM 23 OP1 C B 10 26.727 13.894 0.856 1.00 40.62 O
ATOM 24 OP2 C B 10 25.661 15.381 2.656 1.00 41.33 O
ATOM 25 O5' C B 10 24.855 15.493 0.319 1.00 39.83 O
TER
Atoms:
C2: (22.354,12.959,13.269)
OP1: (21.507,20.297,11.811)
OP2: (23.457,20.044,10.153)
C4: (23.159,12.386,11.156)
O5': (23.347,18.688,12.231)
C3': (23.976,16.631,14.613)
C1': (22.137,15.293,13.986)
O4': (22.027,16.597,13.419)
C5': (23.033,18.848,13.597)
P: (22.496,19.436,11.113)
O2: (21.912,12.658,14.391)
C4': (22.791,17.509,14.254)
C2': (23.224,15.385,15.064)
O2': (22.568,15.565,16.303)
N1: (22.484,14.304,12.948)
N3: (22.708,12.015,12.355)
N4: (23.489,11.424,10.287)
C6: (22.937,14.678,11.713)
C5: (23.286,13.761,10.794)
O3': (24.780,17.197,15.654)
OP1: (21.507,20.297,11.811)
OP2: (23.457,20.044,10.153)
C4: (23.159,12.386,11.156)
O5': (23.347,18.688,12.231)
C3': (23.976,16.631,14.613)
C1': (22.137,15.293,13.986)
O4': (22.027,16.597,13.419)
C5': (23.033,18.848,13.597)
P: (22.496,19.436,11.113)
O2: (21.912,12.658,14.391)
C4': (22.791,17.509,14.254)
C2': (23.224,15.385,15.064)
O2': (22.568,15.565,16.303)
N1: (22.484,14.304,12.948)
N3: (22.708,12.015,12.355)
N4: (23.489,11.424,10.287)
C6: (22.937,14.678,11.713)
C5: (23.286,13.761,10.794)
O3': (24.780,17.197,15.654)
C4: (19.846,17.585,4.554)
N3: (19.604,17.423,3.206)
OP1: (23.657,11.880,7.303)
OP2: (23.950,14.436,7.343)
C2: (19.919,16.334,2.433)
C1': (20.897,14.087,2.334)
C3': (23.230,13.795,2.438)
O5': (23.013,13.365,5.341)
O4': (21.167,13.019,3.235)
C5': (23.109,12.241,4.474)
P: (23.167,13.234,6.923)
C4': (22.562,12.602,3.106)
C2': (22.146,14.259,1.474)
O2': (22.046,13.448,0.318)
N1: (20.544,15.291,3.106)
O4: (19.538,18.646,5.101)
O2: (19.664,16.302,1.242)
C6: (20.816,15.389,4.450)
C5: (20.496,16.473,5.179)
O3': (24.426,13.431,1.747)
N3: (19.604,17.423,3.206)
OP1: (23.657,11.880,7.303)
OP2: (23.950,14.436,7.343)
C2: (19.919,16.334,2.433)
C1': (20.897,14.087,2.334)
C3': (23.230,13.795,2.438)
O5': (23.013,13.365,5.341)
O4': (21.167,13.019,3.235)
C5': (23.109,12.241,4.474)
P: (23.167,13.234,6.923)
C4': (22.562,12.602,3.106)
C2': (22.146,14.259,1.474)
O2': (22.046,13.448,0.318)
N1: (20.544,15.291,3.106)
O4: (19.538,18.646,5.101)
O2: (19.664,16.302,1.242)
C6: (20.816,15.389,4.450)
C5: (20.496,16.473,5.179)
O3': (24.426,13.431,1.747)
Image (generated by PyMOL):