Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
397D:A8:A7
Extra
PDB:
ATOM 1 O3' U A 7 17.211 -8.611 -7.605 1.00 15.85 O
ATOM 2 P C A 8 15.715 -8.824 -7.097 1.00 15.30 P
ATOM 3 OP1 C A 8 15.438 -10.281 -7.260 1.00 17.96 O
ATOM 4 OP2 C A 8 14.822 -7.829 -7.692 1.00 15.31 O
ATOM 5 O5' C A 8 15.759 -8.493 -5.540 1.00 16.03 O
ATOM 6 C5' C A 8 16.480 -9.303 -4.583 1.00 16.23 C
ATOM 7 C4' C A 8 16.458 -8.580 -3.261 1.00 17.88 C
ATOM 8 O4' C A 8 17.305 -7.403 -3.410 1.00 18.39 O
ATOM 9 C3' C A 8 15.110 -7.990 -2.846 1.00 18.03 C
ATOM 10 O3' C A 8 14.309 -8.932 -2.146 1.00 18.07 O
ATOM 11 C2' C A 8 15.577 -6.894 -1.888 1.00 19.37 C
ATOM 12 O2' C A 8 16.019 -7.403 -0.643 1.00 20.46 O
ATOM 13 C1' C A 8 16.786 -6.326 -2.655 1.00 18.84 C
ATOM 14 N1 C A 8 16.387 -5.241 -3.566 1.00 18.54 N
ATOM 15 C2 C A 8 16.303 -3.929 -3.089 1.00 16.79 C
ATOM 16 O2 C A 8 16.569 -3.727 -1.895 1.00 23.34 O
ATOM 17 N3 C A 8 15.934 -2.932 -3.933 1.00 16.45 N
ATOM 18 C4 C A 8 15.628 -3.194 -5.204 1.00 15.24 C
ATOM 19 N4 C A 8 15.288 -2.218 -6.058 1.00 15.89 N
ATOM 20 C5 C A 8 15.732 -4.513 -5.702 1.00 16.35 C
ATOM 21 C6 C A 8 16.085 -5.498 -4.871 1.00 17.90 C
ATOM 22 P U A 9 12.989 -9.572 -2.797 1.00 19.79 P
ATOM 23 OP1 U A 9 12.134 -10.053 -1.674 1.00 24.53 O
ATOM 24 OP2 U A 9 13.365 -10.498 -3.882 1.00 21.07 O
ATOM 25 O5' U A 9 12.336 -8.227 -3.404 1.00 19.69 O
TER
ATOM 1 O3' A B 6 15.720 -3.923 -11.169 1.00 13.85 O
ATOM 2 P U B 7 15.412 -4.378 -9.667 1.00 14.50 P
ATOM 3 OP1 U B 7 14.282 -5.338 -9.673 1.00 14.53 O
ATOM 4 OP2 U B 7 15.325 -3.175 -8.798 1.00 14.73 O
ATOM 5 O5' U B 7 16.778 -5.118 -9.277 1.00 13.88 O
ATOM 6 C5' U B 7 17.197 -6.318 -9.935 1.00 14.42 C
ATOM 7 C4' U B 7 18.246 -6.957 -9.057 1.00 14.14 C
ATOM 8 O4' U B 7 19.355 -6.009 -8.859 1.00 14.93 O
ATOM 9 C3' U B 7 17.814 -7.324 -7.644 1.00 14.56 C
ATOM 10 O3' U B 7 17.211 -8.611 -7.605 1.00 15.85 O
ATOM 11 C2' U B 7 19.136 -7.309 -6.875 1.00 15.26 C
ATOM 12 O2' U B 7 19.946 -8.460 -7.124 1.00 17.00 O
ATOM 13 C1' U B 7 19.792 -6.098 -7.514 1.00 15.21 C
ATOM 14 N1 U B 7 19.612 -4.819 -6.844 1.00 16.10 N
ATOM 15 C2 U B 7 20.323 -4.667 -5.668 1.00 18.92 C
ATOM 16 O2 U B 7 21.051 -5.566 -5.277 1.00 22.16 O
ATOM 17 N3 U B 7 20.166 -3.461 -5.046 1.00 20.71 N
ATOM 18 C4 U B 7 19.356 -2.412 -5.433 1.00 18.04 C
ATOM 19 O4 U B 7 19.333 -1.382 -4.755 1.00 22.47 O
ATOM 20 C5 U B 7 18.690 -2.628 -6.675 1.00 17.66 C
ATOM 21 C6 U B 7 18.809 -3.811 -7.300 1.00 16.69 C
ATOM 22 P C B 8 15.715 -8.824 -7.097 1.00 15.30 P
ATOM 23 OP1 C B 8 15.438 -10.281 -7.260 1.00 17.96 O
ATOM 24 OP2 C B 8 14.822 -7.829 -7.692 1.00 15.31 O
ATOM 25 O5' C B 8 15.759 -8.493 -5.540 1.00 16.03 O
TER
ATOM 2 P C A 8 15.715 -8.824 -7.097 1.00 15.30 P
ATOM 3 OP1 C A 8 15.438 -10.281 -7.260 1.00 17.96 O
ATOM 4 OP2 C A 8 14.822 -7.829 -7.692 1.00 15.31 O
ATOM 5 O5' C A 8 15.759 -8.493 -5.540 1.00 16.03 O
ATOM 6 C5' C A 8 16.480 -9.303 -4.583 1.00 16.23 C
ATOM 7 C4' C A 8 16.458 -8.580 -3.261 1.00 17.88 C
ATOM 8 O4' C A 8 17.305 -7.403 -3.410 1.00 18.39 O
ATOM 9 C3' C A 8 15.110 -7.990 -2.846 1.00 18.03 C
ATOM 10 O3' C A 8 14.309 -8.932 -2.146 1.00 18.07 O
ATOM 11 C2' C A 8 15.577 -6.894 -1.888 1.00 19.37 C
ATOM 12 O2' C A 8 16.019 -7.403 -0.643 1.00 20.46 O
ATOM 13 C1' C A 8 16.786 -6.326 -2.655 1.00 18.84 C
ATOM 14 N1 C A 8 16.387 -5.241 -3.566 1.00 18.54 N
ATOM 15 C2 C A 8 16.303 -3.929 -3.089 1.00 16.79 C
ATOM 16 O2 C A 8 16.569 -3.727 -1.895 1.00 23.34 O
ATOM 17 N3 C A 8 15.934 -2.932 -3.933 1.00 16.45 N
ATOM 18 C4 C A 8 15.628 -3.194 -5.204 1.00 15.24 C
ATOM 19 N4 C A 8 15.288 -2.218 -6.058 1.00 15.89 N
ATOM 20 C5 C A 8 15.732 -4.513 -5.702 1.00 16.35 C
ATOM 21 C6 C A 8 16.085 -5.498 -4.871 1.00 17.90 C
ATOM 22 P U A 9 12.989 -9.572 -2.797 1.00 19.79 P
ATOM 23 OP1 U A 9 12.134 -10.053 -1.674 1.00 24.53 O
ATOM 24 OP2 U A 9 13.365 -10.498 -3.882 1.00 21.07 O
ATOM 25 O5' U A 9 12.336 -8.227 -3.404 1.00 19.69 O
TER
ATOM 1 O3' A B 6 15.720 -3.923 -11.169 1.00 13.85 O
ATOM 2 P U B 7 15.412 -4.378 -9.667 1.00 14.50 P
ATOM 3 OP1 U B 7 14.282 -5.338 -9.673 1.00 14.53 O
ATOM 4 OP2 U B 7 15.325 -3.175 -8.798 1.00 14.73 O
ATOM 5 O5' U B 7 16.778 -5.118 -9.277 1.00 13.88 O
ATOM 6 C5' U B 7 17.197 -6.318 -9.935 1.00 14.42 C
ATOM 7 C4' U B 7 18.246 -6.957 -9.057 1.00 14.14 C
ATOM 8 O4' U B 7 19.355 -6.009 -8.859 1.00 14.93 O
ATOM 9 C3' U B 7 17.814 -7.324 -7.644 1.00 14.56 C
ATOM 10 O3' U B 7 17.211 -8.611 -7.605 1.00 15.85 O
ATOM 11 C2' U B 7 19.136 -7.309 -6.875 1.00 15.26 C
ATOM 12 O2' U B 7 19.946 -8.460 -7.124 1.00 17.00 O
ATOM 13 C1' U B 7 19.792 -6.098 -7.514 1.00 15.21 C
ATOM 14 N1 U B 7 19.612 -4.819 -6.844 1.00 16.10 N
ATOM 15 C2 U B 7 20.323 -4.667 -5.668 1.00 18.92 C
ATOM 16 O2 U B 7 21.051 -5.566 -5.277 1.00 22.16 O
ATOM 17 N3 U B 7 20.166 -3.461 -5.046 1.00 20.71 N
ATOM 18 C4 U B 7 19.356 -2.412 -5.433 1.00 18.04 C
ATOM 19 O4 U B 7 19.333 -1.382 -4.755 1.00 22.47 O
ATOM 20 C5 U B 7 18.690 -2.628 -6.675 1.00 17.66 C
ATOM 21 C6 U B 7 18.809 -3.811 -7.300 1.00 16.69 C
ATOM 22 P C B 8 15.715 -8.824 -7.097 1.00 15.30 P
ATOM 23 OP1 C B 8 15.438 -10.281 -7.260 1.00 17.96 O
ATOM 24 OP2 C B 8 14.822 -7.829 -7.692 1.00 15.31 O
ATOM 25 O5' C B 8 15.759 -8.493 -5.540 1.00 16.03 O
TER
Atoms:
C2: (16.303,-3.929,-3.089)
OP1: (15.438,-10.281,-7.260)
OP2: (14.822,-7.829,-7.692)
C4: (15.628,-3.194,-5.204)
O5': (15.759,-8.493,-5.540)
C3': (15.110,-7.990,-2.846)
C1': (16.786,-6.326,-2.655)
O4': (17.305,-7.403,-3.410)
C5': (16.480,-9.303,-4.583)
P: (15.715,-8.824,-7.097)
O2: (16.569,-3.727,-1.895)
C4': (16.458,-8.580,-3.261)
C2': (15.577,-6.894,-1.888)
O2': (16.019,-7.403,-0.643)
N1: (16.387,-5.241,-3.566)
N3: (15.934,-2.932,-3.933)
N4: (15.288,-2.218,-6.058)
C6: (16.085,-5.498,-4.871)
C5: (15.732,-4.513,-5.702)
O3': (14.309,-8.932,-2.146)
OP1: (15.438,-10.281,-7.260)
OP2: (14.822,-7.829,-7.692)
C4: (15.628,-3.194,-5.204)
O5': (15.759,-8.493,-5.540)
C3': (15.110,-7.990,-2.846)
C1': (16.786,-6.326,-2.655)
O4': (17.305,-7.403,-3.410)
C5': (16.480,-9.303,-4.583)
P: (15.715,-8.824,-7.097)
O2: (16.569,-3.727,-1.895)
C4': (16.458,-8.580,-3.261)
C2': (15.577,-6.894,-1.888)
O2': (16.019,-7.403,-0.643)
N1: (16.387,-5.241,-3.566)
N3: (15.934,-2.932,-3.933)
N4: (15.288,-2.218,-6.058)
C6: (16.085,-5.498,-4.871)
C5: (15.732,-4.513,-5.702)
O3': (14.309,-8.932,-2.146)
C4: (19.356,-2.412,-5.433)
N3: (20.166,-3.461,-5.046)
OP1: (14.282,-5.338,-9.673)
OP2: (15.325,-3.175,-8.798)
C2: (20.323,-4.667,-5.668)
C1': (19.792,-6.098,-7.514)
C3': (17.814,-7.324,-7.644)
O5': (16.778,-5.118,-9.277)
O4': (19.355,-6.009,-8.859)
C5': (17.197,-6.318,-9.935)
P: (15.412,-4.378,-9.667)
C4': (18.246,-6.957,-9.057)
C2': (19.136,-7.309,-6.875)
O2': (19.946,-8.460,-7.124)
N1: (19.612,-4.819,-6.844)
O4: (19.333,-1.382,-4.755)
O2: (21.051,-5.566,-5.277)
C6: (18.809,-3.811,-7.300)
C5: (18.690,-2.628,-6.675)
O3': (17.211,-8.611,-7.605)
N3: (20.166,-3.461,-5.046)
OP1: (14.282,-5.338,-9.673)
OP2: (15.325,-3.175,-8.798)
C2: (20.323,-4.667,-5.668)
C1': (19.792,-6.098,-7.514)
C3': (17.814,-7.324,-7.644)
O5': (16.778,-5.118,-9.277)
O4': (19.355,-6.009,-8.859)
C5': (17.197,-6.318,-9.935)
P: (15.412,-4.378,-9.667)
C4': (18.246,-6.957,-9.057)
C2': (19.136,-7.309,-6.875)
O2': (19.946,-8.460,-7.124)
N1: (19.612,-4.819,-6.844)
O4: (19.333,-1.382,-4.755)
O2: (21.051,-5.566,-5.277)
C6: (18.809,-3.811,-7.300)
C5: (18.690,-2.628,-6.675)
O3': (17.211,-8.611,-7.605)
Image (generated by PyMOL):