Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCM:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.882 104.187 117.101 1.00 39.59 O
ATOM 2 P C A1088 44.933 104.447 118.681 1.00 39.74 P
ATOM 3 OP1 C A1088 44.265 105.755 118.943 1.00 42.26 O
ATOM 4 OP2 C A1088 46.335 104.232 119.133 1.00 41.69 O
ATOM 5 O5' C A1088 44.037 103.284 119.302 1.00 39.59 O
ATOM 6 C5' C A1088 42.714 103.547 119.807 1.00 38.06 C
ATOM 7 C4' C A1088 42.157 102.307 120.463 1.00 39.24 C
ATOM 8 O4' C A1088 41.993 101.266 119.463 1.00 37.37 O
ATOM 9 C3' C A1088 43.061 101.688 121.519 1.00 38.86 C
ATOM 10 O3' C A1088 42.848 102.309 122.790 1.00 38.09 O
ATOM 11 C2' C A1088 42.609 100.228 121.522 1.00 38.40 C
ATOM 12 O2' C A1088 41.447 100.011 122.298 1.00 39.89 O
ATOM 13 C1' C A1088 42.263 100.003 120.044 1.00 36.89 C
ATOM 14 N1 C A1088 43.308 99.326 119.255 1.00 36.40 N
ATOM 15 C2 C A1088 43.571 97.976 119.510 1.00 36.11 C
ATOM 16 O2 C A1088 42.909 97.389 120.372 1.00 37.09 O
ATOM 17 N3 C A1088 44.535 97.342 118.809 1.00 36.28 N
ATOM 18 C4 C A1088 45.221 97.998 117.874 1.00 35.44 C
ATOM 19 N4 C A1088 46.166 97.325 117.215 1.00 33.26 N
ATOM 20 C5 C A1088 44.969 99.372 117.578 1.00 35.78 C
ATOM 21 C6 C A1088 44.012 99.993 118.289 1.00 36.76 C
ATOM 22 P U A1089 44.011 103.198 123.468 1.00 39.10 P
ATOM 23 OP1 U A1089 43.519 103.523 124.833 1.00 40.07 O
ATOM 24 OP2 U A1089 44.382 104.304 122.538 1.00 38.28 O
ATOM 25 O5' U A1089 45.256 102.207 123.615 1.00 39.67 O
TER
ATOM 1 O3' C B1086 49.711 100.192 114.799 1.00 37.75 O
ATOM 2 P U B1087 48.482 99.895 115.793 1.00 37.17 P
ATOM 3 OP1 U B1087 49.061 99.924 117.157 1.00 39.56 O
ATOM 4 OP2 U B1087 47.766 98.685 115.328 1.00 36.06 O
ATOM 5 O5' U B1087 47.525 101.159 115.639 1.00 37.51 O
ATOM 6 C5' U B1087 47.955 102.455 116.071 1.00 37.52 C
ATOM 7 C4' U B1087 46.834 103.453 115.932 1.00 39.26 C
ATOM 8 O4' U B1087 46.553 103.694 114.520 1.00 40.57 O
ATOM 9 C3' U B1087 45.510 103.037 116.561 1.00 39.61 C
ATOM 10 O3' U B1087 44.882 104.187 117.101 1.00 39.59 O
ATOM 11 C2' U B1087 44.716 102.536 115.358 1.00 40.37 C
ATOM 12 O2' U B1087 43.317 102.600 115.543 1.00 40.54 O
ATOM 13 C1' U B1087 45.172 103.516 114.282 1.00 38.54 C
ATOM 14 N1 U B1087 44.978 103.051 112.900 1.00 37.79 N
ATOM 15 C2 U B1087 44.340 103.911 112.021 1.00 35.98 C
ATOM 16 O2 U B1087 43.971 105.022 112.337 1.00 37.05 O
ATOM 17 N3 U B1087 44.152 103.421 110.757 1.00 34.60 N
ATOM 18 C4 U B1087 44.528 102.187 110.281 1.00 36.15 C
ATOM 19 O4 U B1087 44.258 101.882 109.114 1.00 36.35 O
ATOM 20 C5 U B1087 45.198 101.356 111.241 1.00 36.49 C
ATOM 21 C6 U B1087 45.397 101.808 112.487 1.00 37.35 C
ATOM 22 P C B1088 44.933 104.447 118.681 1.00 39.74 P
ATOM 23 OP1 C B1088 44.265 105.755 118.943 1.00 42.26 O
ATOM 24 OP2 C B1088 46.335 104.232 119.133 1.00 41.69 O
ATOM 25 O5' C B1088 44.037 103.284 119.302 1.00 39.59 O
TER
ATOM 2 P C A1088 44.933 104.447 118.681 1.00 39.74 P
ATOM 3 OP1 C A1088 44.265 105.755 118.943 1.00 42.26 O
ATOM 4 OP2 C A1088 46.335 104.232 119.133 1.00 41.69 O
ATOM 5 O5' C A1088 44.037 103.284 119.302 1.00 39.59 O
ATOM 6 C5' C A1088 42.714 103.547 119.807 1.00 38.06 C
ATOM 7 C4' C A1088 42.157 102.307 120.463 1.00 39.24 C
ATOM 8 O4' C A1088 41.993 101.266 119.463 1.00 37.37 O
ATOM 9 C3' C A1088 43.061 101.688 121.519 1.00 38.86 C
ATOM 10 O3' C A1088 42.848 102.309 122.790 1.00 38.09 O
ATOM 11 C2' C A1088 42.609 100.228 121.522 1.00 38.40 C
ATOM 12 O2' C A1088 41.447 100.011 122.298 1.00 39.89 O
ATOM 13 C1' C A1088 42.263 100.003 120.044 1.00 36.89 C
ATOM 14 N1 C A1088 43.308 99.326 119.255 1.00 36.40 N
ATOM 15 C2 C A1088 43.571 97.976 119.510 1.00 36.11 C
ATOM 16 O2 C A1088 42.909 97.389 120.372 1.00 37.09 O
ATOM 17 N3 C A1088 44.535 97.342 118.809 1.00 36.28 N
ATOM 18 C4 C A1088 45.221 97.998 117.874 1.00 35.44 C
ATOM 19 N4 C A1088 46.166 97.325 117.215 1.00 33.26 N
ATOM 20 C5 C A1088 44.969 99.372 117.578 1.00 35.78 C
ATOM 21 C6 C A1088 44.012 99.993 118.289 1.00 36.76 C
ATOM 22 P U A1089 44.011 103.198 123.468 1.00 39.10 P
ATOM 23 OP1 U A1089 43.519 103.523 124.833 1.00 40.07 O
ATOM 24 OP2 U A1089 44.382 104.304 122.538 1.00 38.28 O
ATOM 25 O5' U A1089 45.256 102.207 123.615 1.00 39.67 O
TER
ATOM 1 O3' C B1086 49.711 100.192 114.799 1.00 37.75 O
ATOM 2 P U B1087 48.482 99.895 115.793 1.00 37.17 P
ATOM 3 OP1 U B1087 49.061 99.924 117.157 1.00 39.56 O
ATOM 4 OP2 U B1087 47.766 98.685 115.328 1.00 36.06 O
ATOM 5 O5' U B1087 47.525 101.159 115.639 1.00 37.51 O
ATOM 6 C5' U B1087 47.955 102.455 116.071 1.00 37.52 C
ATOM 7 C4' U B1087 46.834 103.453 115.932 1.00 39.26 C
ATOM 8 O4' U B1087 46.553 103.694 114.520 1.00 40.57 O
ATOM 9 C3' U B1087 45.510 103.037 116.561 1.00 39.61 C
ATOM 10 O3' U B1087 44.882 104.187 117.101 1.00 39.59 O
ATOM 11 C2' U B1087 44.716 102.536 115.358 1.00 40.37 C
ATOM 12 O2' U B1087 43.317 102.600 115.543 1.00 40.54 O
ATOM 13 C1' U B1087 45.172 103.516 114.282 1.00 38.54 C
ATOM 14 N1 U B1087 44.978 103.051 112.900 1.00 37.79 N
ATOM 15 C2 U B1087 44.340 103.911 112.021 1.00 35.98 C
ATOM 16 O2 U B1087 43.971 105.022 112.337 1.00 37.05 O
ATOM 17 N3 U B1087 44.152 103.421 110.757 1.00 34.60 N
ATOM 18 C4 U B1087 44.528 102.187 110.281 1.00 36.15 C
ATOM 19 O4 U B1087 44.258 101.882 109.114 1.00 36.35 O
ATOM 20 C5 U B1087 45.198 101.356 111.241 1.00 36.49 C
ATOM 21 C6 U B1087 45.397 101.808 112.487 1.00 37.35 C
ATOM 22 P C B1088 44.933 104.447 118.681 1.00 39.74 P
ATOM 23 OP1 C B1088 44.265 105.755 118.943 1.00 42.26 O
ATOM 24 OP2 C B1088 46.335 104.232 119.133 1.00 41.69 O
ATOM 25 O5' C B1088 44.037 103.284 119.302 1.00 39.59 O
TER
Atoms:
C2: (43.571,97.976,119.510)
OP1: (44.265,105.755,118.943)
OP2: (46.335,104.232,119.133)
C4: (45.221,97.998,117.874)
O5': (44.037,103.284,119.302)
C3': (43.061,101.688,121.519)
C1': (42.263,100.003,120.044)
O4': (41.993,101.266,119.463)
C5': (42.714,103.547,119.807)
P: (44.933,104.447,118.681)
O2: (42.909,97.389,120.372)
C4': (42.157,102.307,120.463)
C2': (42.609,100.228,121.522)
O2': (41.447,100.011,122.298)
N1: (43.308,99.326,119.255)
N3: (44.535,97.342,118.809)
N4: (46.166,97.325,117.215)
C6: (44.012,99.993,118.289)
C5: (44.969,99.372,117.578)
O3': (42.848,102.309,122.790)
OP1: (44.265,105.755,118.943)
OP2: (46.335,104.232,119.133)
C4: (45.221,97.998,117.874)
O5': (44.037,103.284,119.302)
C3': (43.061,101.688,121.519)
C1': (42.263,100.003,120.044)
O4': (41.993,101.266,119.463)
C5': (42.714,103.547,119.807)
P: (44.933,104.447,118.681)
O2: (42.909,97.389,120.372)
C4': (42.157,102.307,120.463)
C2': (42.609,100.228,121.522)
O2': (41.447,100.011,122.298)
N1: (43.308,99.326,119.255)
N3: (44.535,97.342,118.809)
N4: (46.166,97.325,117.215)
C6: (44.012,99.993,118.289)
C5: (44.969,99.372,117.578)
O3': (42.848,102.309,122.790)
C4: (44.528,102.187,110.281)
N3: (44.152,103.421,110.757)
OP1: (49.061,99.924,117.157)
OP2: (47.766,98.685,115.328)
C2: (44.340,103.911,112.021)
C1': (45.172,103.516,114.282)
C3': (45.510,103.037,116.561)
O5': (47.525,101.159,115.639)
O4': (46.553,103.694,114.520)
C5': (47.955,102.455,116.071)
P: (48.482,99.895,115.793)
C4': (46.834,103.453,115.932)
C2': (44.716,102.536,115.358)
O2': (43.317,102.600,115.543)
N1: (44.978,103.051,112.900)
O4: (44.258,101.882,109.114)
O2: (43.971,105.022,112.337)
C6: (45.397,101.808,112.487)
C5: (45.198,101.356,111.241)
O3': (44.882,104.187,117.101)
N3: (44.152,103.421,110.757)
OP1: (49.061,99.924,117.157)
OP2: (47.766,98.685,115.328)
C2: (44.340,103.911,112.021)
C1': (45.172,103.516,114.282)
C3': (45.510,103.037,116.561)
O5': (47.525,101.159,115.639)
O4': (46.553,103.694,114.520)
C5': (47.955,102.455,116.071)
P: (48.482,99.895,115.793)
C4': (46.834,103.453,115.932)
C2': (44.716,102.536,115.358)
O2': (43.317,102.600,115.543)
N1: (44.978,103.051,112.900)
O4: (44.258,101.882,109.114)
O2: (43.971,105.022,112.337)
C6: (45.397,101.808,112.487)
C5: (45.198,101.356,111.241)
O3': (44.882,104.187,117.101)
Image (generated by PyMOL):