Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1238:A1237
Extra
PDB:
ATOM 1 O3' U A1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 2 P C A1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 3 OP1 C A1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 4 OP2 C A1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 5 O5' C A1238 27.440 -74.976 -2.841 1.00 37.72 O
ATOM 6 C5' C A1238 27.345 -74.960 -4.259 1.00 34.58 C
ATOM 7 C4' C A1238 26.019 -75.493 -4.727 1.00 30.31 C
ATOM 8 O4' C A1238 26.026 -76.930 -4.659 1.00 37.26 O
ATOM 9 C3' C A1238 24.816 -75.073 -3.899 1.00 31.07 C
ATOM 10 O3' C A1238 24.299 -73.846 -4.322 1.00 39.70 O
ATOM 11 C2' C A1238 23.841 -76.203 -4.090 1.00 33.09 C
ATOM 12 O2' C A1238 23.139 -76.042 -5.309 1.00 37.72 O
ATOM 13 C1' C A1238 24.774 -77.400 -4.222 1.00 39.39 C
ATOM 14 N1 C A1238 24.958 -78.102 -2.942 1.00 38.88 N
ATOM 15 C2 C A1238 23.867 -78.774 -2.405 1.00 43.05 C
ATOM 16 O2 C A1238 22.787 -78.741 -3.015 1.00 42.62 O
ATOM 17 N3 C A1238 24.009 -79.425 -1.230 1.00 44.84 N
ATOM 18 C4 C A1238 25.184 -79.428 -0.614 1.00 41.00 C
ATOM 19 N4 C A1238 25.274 -80.083 0.539 1.00 44.89 N
ATOM 20 C5 C A1238 26.316 -78.764 -1.158 1.00 41.77 C
ATOM 21 C6 C A1238 26.160 -78.113 -2.312 1.00 36.53 C
ATOM 22 P C A1239 23.552 -72.887 -3.298 1.00 39.36 P
ATOM 23 OP1 C A1239 23.405 -71.582 -3.976 1.00 31.56 O
ATOM 24 OP2 C A1239 24.283 -72.933 -2.016 1.00 38.93 O
ATOM 25 O5' C A1239 22.142 -73.595 -3.146 1.00 41.83 O
TER
ATOM 1 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 2 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 3 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 4 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 5 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
ATOM 6 C5' U B1237 29.143 -76.528 1.288 1.00 39.41 C
ATOM 7 C4' U B1237 29.978 -75.756 0.313 1.00 35.80 C
ATOM 8 O4' U B1237 31.384 -75.992 0.607 1.00 38.52 O
ATOM 9 C3' U B1237 29.761 -76.141 -1.143 1.00 29.13 C
ATOM 10 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 11 C2' U B1237 30.955 -77.021 -1.449 1.00 30.28 C
ATOM 12 O2' U B1237 31.325 -77.024 -2.806 1.00 34.76 O
ATOM 13 C1' U B1237 32.041 -76.411 -0.560 1.00 35.50 C
ATOM 14 N1 U B1237 33.083 -77.364 -0.178 1.00 31.75 N
ATOM 15 C2 U B1237 34.384 -77.179 -0.612 1.00 33.34 C
ATOM 16 O2 U B1237 34.753 -76.229 -1.281 1.00 31.25 O
ATOM 17 N3 U B1237 35.260 -78.159 -0.240 1.00 31.53 N
ATOM 18 C4 U B1237 34.979 -79.272 0.497 1.00 36.70 C
ATOM 19 O4 U B1237 35.886 -80.062 0.760 1.00 38.40 O
ATOM 20 C5 U B1237 33.607 -79.375 0.903 1.00 44.86 C
ATOM 21 C6 U B1237 32.713 -78.446 0.560 1.00 36.91 C
ATOM 22 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 23 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 24 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 25 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
TER
ATOM 2 P C A1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 3 OP1 C A1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 4 OP2 C A1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 5 O5' C A1238 27.440 -74.976 -2.841 1.00 37.72 O
ATOM 6 C5' C A1238 27.345 -74.960 -4.259 1.00 34.58 C
ATOM 7 C4' C A1238 26.019 -75.493 -4.727 1.00 30.31 C
ATOM 8 O4' C A1238 26.026 -76.930 -4.659 1.00 37.26 O
ATOM 9 C3' C A1238 24.816 -75.073 -3.899 1.00 31.07 C
ATOM 10 O3' C A1238 24.299 -73.846 -4.322 1.00 39.70 O
ATOM 11 C2' C A1238 23.841 -76.203 -4.090 1.00 33.09 C
ATOM 12 O2' C A1238 23.139 -76.042 -5.309 1.00 37.72 O
ATOM 13 C1' C A1238 24.774 -77.400 -4.222 1.00 39.39 C
ATOM 14 N1 C A1238 24.958 -78.102 -2.942 1.00 38.88 N
ATOM 15 C2 C A1238 23.867 -78.774 -2.405 1.00 43.05 C
ATOM 16 O2 C A1238 22.787 -78.741 -3.015 1.00 42.62 O
ATOM 17 N3 C A1238 24.009 -79.425 -1.230 1.00 44.84 N
ATOM 18 C4 C A1238 25.184 -79.428 -0.614 1.00 41.00 C
ATOM 19 N4 C A1238 25.274 -80.083 0.539 1.00 44.89 N
ATOM 20 C5 C A1238 26.316 -78.764 -1.158 1.00 41.77 C
ATOM 21 C6 C A1238 26.160 -78.113 -2.312 1.00 36.53 C
ATOM 22 P C A1239 23.552 -72.887 -3.298 1.00 39.36 P
ATOM 23 OP1 C A1239 23.405 -71.582 -3.976 1.00 31.56 O
ATOM 24 OP2 C A1239 24.283 -72.933 -2.016 1.00 38.93 O
ATOM 25 O5' C A1239 22.142 -73.595 -3.146 1.00 41.83 O
TER
ATOM 1 O3' A B1236 29.422 -78.528 3.507 1.00 34.99 O
ATOM 2 P U B1237 28.661 -78.916 2.157 1.00 40.07 P
ATOM 3 OP1 U B1237 27.238 -78.578 2.354 1.00 56.34 O
ATOM 4 OP2 U B1237 29.032 -80.314 1.829 1.00 44.87 O
ATOM 5 O5' U B1237 29.290 -77.924 1.107 1.00 40.76 O
ATOM 6 C5' U B1237 29.143 -76.528 1.288 1.00 39.41 C
ATOM 7 C4' U B1237 29.978 -75.756 0.313 1.00 35.80 C
ATOM 8 O4' U B1237 31.384 -75.992 0.607 1.00 38.52 O
ATOM 9 C3' U B1237 29.761 -76.141 -1.143 1.00 29.13 C
ATOM 10 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 11 C2' U B1237 30.955 -77.021 -1.449 1.00 30.28 C
ATOM 12 O2' U B1237 31.325 -77.024 -2.806 1.00 34.76 O
ATOM 13 C1' U B1237 32.041 -76.411 -0.560 1.00 35.50 C
ATOM 14 N1 U B1237 33.083 -77.364 -0.178 1.00 31.75 N
ATOM 15 C2 U B1237 34.384 -77.179 -0.612 1.00 33.34 C
ATOM 16 O2 U B1237 34.753 -76.229 -1.281 1.00 31.25 O
ATOM 17 N3 U B1237 35.260 -78.159 -0.240 1.00 31.53 N
ATOM 18 C4 U B1237 34.979 -79.272 0.497 1.00 36.70 C
ATOM 19 O4 U B1237 35.886 -80.062 0.760 1.00 38.40 O
ATOM 20 C5 U B1237 33.607 -79.375 0.903 1.00 44.86 C
ATOM 21 C6 U B1237 32.713 -78.446 0.560 1.00 36.91 C
ATOM 22 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 23 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 24 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 25 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
TER
Atoms:
C2: (23.867,-78.774,-2.405)
OP1: (28.832,-72.885,-2.928)
OP2: (28.008,-73.782,-0.697)
C4: (25.184,-79.428,-0.614)
O5': (27.440,-74.976,-2.841)
C3': (24.816,-75.073,-3.899)
C1': (24.774,-77.400,-4.222)
O4': (26.026,-76.930,-4.659)
C5': (27.345,-74.960,-4.259)
P: (28.479,-74.040,-2.078)
O2: (22.787,-78.741,-3.015)
C4': (26.019,-75.493,-4.727)
C2': (23.841,-76.203,-4.090)
O2': (23.139,-76.042,-5.309)
N1: (24.958,-78.102,-2.942)
N3: (24.009,-79.425,-1.230)
N4: (25.274,-80.083,0.539)
C6: (26.160,-78.113,-2.312)
C5: (26.316,-78.764,-1.158)
O3': (24.299,-73.846,-4.322)
OP1: (28.832,-72.885,-2.928)
OP2: (28.008,-73.782,-0.697)
C4: (25.184,-79.428,-0.614)
O5': (27.440,-74.976,-2.841)
C3': (24.816,-75.073,-3.899)
C1': (24.774,-77.400,-4.222)
O4': (26.026,-76.930,-4.659)
C5': (27.345,-74.960,-4.259)
P: (28.479,-74.040,-2.078)
O2: (22.787,-78.741,-3.015)
C4': (26.019,-75.493,-4.727)
C2': (23.841,-76.203,-4.090)
O2': (23.139,-76.042,-5.309)
N1: (24.958,-78.102,-2.942)
N3: (24.009,-79.425,-1.230)
N4: (25.274,-80.083,0.539)
C6: (26.160,-78.113,-2.312)
C5: (26.316,-78.764,-1.158)
O3': (24.299,-73.846,-4.322)
C4: (34.979,-79.272,0.497)
N3: (35.260,-78.159,-0.240)
OP1: (27.238,-78.578,2.354)
OP2: (29.032,-80.314,1.829)
C2: (34.384,-77.179,-0.612)
C1': (32.041,-76.411,-0.560)
C3': (29.761,-76.141,-1.143)
O5': (29.290,-77.924,1.107)
O4': (31.384,-75.992,0.607)
C5': (29.143,-76.528,1.288)
P: (28.661,-78.916,2.157)
C4': (29.978,-75.756,0.313)
C2': (30.955,-77.021,-1.449)
O2': (31.325,-77.024,-2.806)
N1: (33.083,-77.364,-0.178)
O4: (35.886,-80.062,0.760)
O2: (34.753,-76.229,-1.281)
C6: (32.713,-78.446,0.560)
C5: (33.607,-79.375,0.903)
O3': (29.788,-74.978,-1.966)
N3: (35.260,-78.159,-0.240)
OP1: (27.238,-78.578,2.354)
OP2: (29.032,-80.314,1.829)
C2: (34.384,-77.179,-0.612)
C1': (32.041,-76.411,-0.560)
C3': (29.761,-76.141,-1.143)
O5': (29.290,-77.924,1.107)
O4': (31.384,-75.992,0.607)
C5': (29.143,-76.528,1.288)
P: (28.661,-78.916,2.157)
C4': (29.978,-75.756,0.313)
C2': (30.955,-77.021,-1.449)
O2': (31.325,-77.024,-2.806)
N1: (33.083,-77.364,-0.178)
O4: (35.886,-80.062,0.760)
O2: (34.753,-76.229,-1.281)
C6: (32.713,-78.446,0.560)
C5: (33.607,-79.375,0.903)
O3': (29.788,-74.978,-1.966)
Image (generated by PyMOL):