Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.769 104.461 117.341 1.00 48.88 O
ATOM 2 P C A1088 44.859 104.736 118.923 1.00 51.50 P
ATOM 3 OP1 C A1088 44.252 106.075 119.201 1.00 50.81 O
ATOM 4 OP2 C A1088 46.265 104.474 119.331 1.00 51.60 O
ATOM 5 O5' C A1088 43.934 103.600 119.551 1.00 50.72 O
ATOM 6 C5' C A1088 42.648 103.915 120.125 1.00 50.69 C
ATOM 7 C4' C A1088 42.059 102.691 120.787 1.00 51.27 C
ATOM 8 O4' C A1088 41.827 101.672 119.779 1.00 49.89 O
ATOM 9 C3' C A1088 42.950 102.012 121.820 1.00 51.88 C
ATOM 10 O3' C A1088 42.829 102.621 123.108 1.00 50.96 O
ATOM 11 C2' C A1088 42.420 100.581 121.818 1.00 52.28 C
ATOM 12 O2' C A1088 41.268 100.409 122.622 1.00 53.44 O
ATOM 13 C1' C A1088 42.051 100.387 120.341 1.00 51.11 C
ATOM 14 N1 C A1088 43.077 99.685 119.542 1.00 50.38 N
ATOM 15 C2 C A1088 43.317 98.322 119.792 1.00 50.65 C
ATOM 16 O2 C A1088 42.656 97.739 120.667 1.00 54.06 O
ATOM 17 N3 C A1088 44.261 97.675 119.074 1.00 48.42 N
ATOM 18 C4 C A1088 44.951 98.324 118.139 1.00 47.46 C
ATOM 19 N4 C A1088 45.880 97.642 117.470 1.00 45.89 N
ATOM 20 C5 C A1088 44.723 99.702 117.852 1.00 48.08 C
ATOM 21 C6 C A1088 43.787 100.338 118.572 1.00 49.84 C
ATOM 22 P U A1089 44.038 103.513 123.699 1.00 54.07 P
ATOM 23 OP1 U A1089 43.610 103.990 125.040 1.00 54.55 O
ATOM 24 OP2 U A1089 44.426 104.507 122.655 1.00 55.17 O
ATOM 25 O5' U A1089 45.260 102.504 123.879 1.00 51.93 O
TER
ATOM 1 O3' C B1086 49.611 100.509 114.975 1.00 48.02 O
ATOM 2 P U B1087 48.400 100.173 115.980 1.00 47.83 P
ATOM 3 OP1 U B1087 48.961 100.141 117.356 1.00 49.20 O
ATOM 4 OP2 U B1087 47.674 98.988 115.464 1.00 44.09 O
ATOM 5 O5' U B1087 47.429 101.429 115.869 1.00 46.33 O
ATOM 6 C5' U B1087 47.850 102.731 116.285 1.00 45.58 C
ATOM 7 C4' U B1087 46.713 103.715 116.142 1.00 46.94 C
ATOM 8 O4' U B1087 46.413 103.913 114.729 1.00 46.87 O
ATOM 9 C3' U B1087 45.394 103.307 116.797 1.00 48.21 C
ATOM 10 O3' U B1087 44.769 104.461 117.341 1.00 48.88 O
ATOM 11 C2' U B1087 44.584 102.782 115.615 1.00 47.12 C
ATOM 12 O2' U B1087 43.188 102.849 115.812 1.00 47.48 O
ATOM 13 C1' U B1087 45.028 103.743 114.517 1.00 44.50 C
ATOM 14 N1 U B1087 44.807 103.286 113.136 1.00 42.40 N
ATOM 15 C2 U B1087 44.099 104.131 112.286 1.00 41.04 C
ATOM 16 O2 U B1087 43.667 105.214 112.626 1.00 42.40 O
ATOM 17 N3 U B1087 43.913 103.656 111.017 1.00 40.13 N
ATOM 18 C4 U B1087 44.339 102.458 110.511 1.00 40.61 C
ATOM 19 O4 U B1087 44.077 102.178 109.342 1.00 41.55 O
ATOM 20 C5 U B1087 45.067 101.635 111.441 1.00 42.03 C
ATOM 21 C6 U B1087 45.273 102.070 112.689 1.00 41.48 C
ATOM 22 P C B1088 44.859 104.736 118.923 1.00 51.50 P
ATOM 23 OP1 C B1088 44.252 106.075 119.201 1.00 50.81 O
ATOM 24 OP2 C B1088 46.265 104.474 119.331 1.00 51.60 O
ATOM 25 O5' C B1088 43.934 103.600 119.551 1.00 50.72 O
TER
ATOM 2 P C A1088 44.859 104.736 118.923 1.00 51.50 P
ATOM 3 OP1 C A1088 44.252 106.075 119.201 1.00 50.81 O
ATOM 4 OP2 C A1088 46.265 104.474 119.331 1.00 51.60 O
ATOM 5 O5' C A1088 43.934 103.600 119.551 1.00 50.72 O
ATOM 6 C5' C A1088 42.648 103.915 120.125 1.00 50.69 C
ATOM 7 C4' C A1088 42.059 102.691 120.787 1.00 51.27 C
ATOM 8 O4' C A1088 41.827 101.672 119.779 1.00 49.89 O
ATOM 9 C3' C A1088 42.950 102.012 121.820 1.00 51.88 C
ATOM 10 O3' C A1088 42.829 102.621 123.108 1.00 50.96 O
ATOM 11 C2' C A1088 42.420 100.581 121.818 1.00 52.28 C
ATOM 12 O2' C A1088 41.268 100.409 122.622 1.00 53.44 O
ATOM 13 C1' C A1088 42.051 100.387 120.341 1.00 51.11 C
ATOM 14 N1 C A1088 43.077 99.685 119.542 1.00 50.38 N
ATOM 15 C2 C A1088 43.317 98.322 119.792 1.00 50.65 C
ATOM 16 O2 C A1088 42.656 97.739 120.667 1.00 54.06 O
ATOM 17 N3 C A1088 44.261 97.675 119.074 1.00 48.42 N
ATOM 18 C4 C A1088 44.951 98.324 118.139 1.00 47.46 C
ATOM 19 N4 C A1088 45.880 97.642 117.470 1.00 45.89 N
ATOM 20 C5 C A1088 44.723 99.702 117.852 1.00 48.08 C
ATOM 21 C6 C A1088 43.787 100.338 118.572 1.00 49.84 C
ATOM 22 P U A1089 44.038 103.513 123.699 1.00 54.07 P
ATOM 23 OP1 U A1089 43.610 103.990 125.040 1.00 54.55 O
ATOM 24 OP2 U A1089 44.426 104.507 122.655 1.00 55.17 O
ATOM 25 O5' U A1089 45.260 102.504 123.879 1.00 51.93 O
TER
ATOM 1 O3' C B1086 49.611 100.509 114.975 1.00 48.02 O
ATOM 2 P U B1087 48.400 100.173 115.980 1.00 47.83 P
ATOM 3 OP1 U B1087 48.961 100.141 117.356 1.00 49.20 O
ATOM 4 OP2 U B1087 47.674 98.988 115.464 1.00 44.09 O
ATOM 5 O5' U B1087 47.429 101.429 115.869 1.00 46.33 O
ATOM 6 C5' U B1087 47.850 102.731 116.285 1.00 45.58 C
ATOM 7 C4' U B1087 46.713 103.715 116.142 1.00 46.94 C
ATOM 8 O4' U B1087 46.413 103.913 114.729 1.00 46.87 O
ATOM 9 C3' U B1087 45.394 103.307 116.797 1.00 48.21 C
ATOM 10 O3' U B1087 44.769 104.461 117.341 1.00 48.88 O
ATOM 11 C2' U B1087 44.584 102.782 115.615 1.00 47.12 C
ATOM 12 O2' U B1087 43.188 102.849 115.812 1.00 47.48 O
ATOM 13 C1' U B1087 45.028 103.743 114.517 1.00 44.50 C
ATOM 14 N1 U B1087 44.807 103.286 113.136 1.00 42.40 N
ATOM 15 C2 U B1087 44.099 104.131 112.286 1.00 41.04 C
ATOM 16 O2 U B1087 43.667 105.214 112.626 1.00 42.40 O
ATOM 17 N3 U B1087 43.913 103.656 111.017 1.00 40.13 N
ATOM 18 C4 U B1087 44.339 102.458 110.511 1.00 40.61 C
ATOM 19 O4 U B1087 44.077 102.178 109.342 1.00 41.55 O
ATOM 20 C5 U B1087 45.067 101.635 111.441 1.00 42.03 C
ATOM 21 C6 U B1087 45.273 102.070 112.689 1.00 41.48 C
ATOM 22 P C B1088 44.859 104.736 118.923 1.00 51.50 P
ATOM 23 OP1 C B1088 44.252 106.075 119.201 1.00 50.81 O
ATOM 24 OP2 C B1088 46.265 104.474 119.331 1.00 51.60 O
ATOM 25 O5' C B1088 43.934 103.600 119.551 1.00 50.72 O
TER
Atoms:
C2: (43.317,98.322,119.792)
OP1: (44.252,106.075,119.201)
OP2: (46.265,104.474,119.331)
C4: (44.951,98.324,118.139)
O5': (43.934,103.600,119.551)
C3': (42.950,102.012,121.820)
C1': (42.051,100.387,120.341)
O4': (41.827,101.672,119.779)
C5': (42.648,103.915,120.125)
P: (44.859,104.736,118.923)
O2: (42.656,97.739,120.667)
C4': (42.059,102.691,120.787)
C2': (42.420,100.581,121.818)
O2': (41.268,100.409,122.622)
N1: (43.077,99.685,119.542)
N3: (44.261,97.675,119.074)
N4: (45.880,97.642,117.470)
C6: (43.787,100.338,118.572)
C5: (44.723,99.702,117.852)
O3': (42.829,102.621,123.108)
OP1: (44.252,106.075,119.201)
OP2: (46.265,104.474,119.331)
C4: (44.951,98.324,118.139)
O5': (43.934,103.600,119.551)
C3': (42.950,102.012,121.820)
C1': (42.051,100.387,120.341)
O4': (41.827,101.672,119.779)
C5': (42.648,103.915,120.125)
P: (44.859,104.736,118.923)
O2: (42.656,97.739,120.667)
C4': (42.059,102.691,120.787)
C2': (42.420,100.581,121.818)
O2': (41.268,100.409,122.622)
N1: (43.077,99.685,119.542)
N3: (44.261,97.675,119.074)
N4: (45.880,97.642,117.470)
C6: (43.787,100.338,118.572)
C5: (44.723,99.702,117.852)
O3': (42.829,102.621,123.108)
C4: (44.339,102.458,110.511)
N3: (43.913,103.656,111.017)
OP1: (48.961,100.141,117.356)
OP2: (47.674,98.988,115.464)
C2: (44.099,104.131,112.286)
C1': (45.028,103.743,114.517)
C3': (45.394,103.307,116.797)
O5': (47.429,101.429,115.869)
O4': (46.413,103.913,114.729)
C5': (47.850,102.731,116.285)
P: (48.400,100.173,115.980)
C4': (46.713,103.715,116.142)
C2': (44.584,102.782,115.615)
O2': (43.188,102.849,115.812)
N1: (44.807,103.286,113.136)
O4: (44.077,102.178,109.342)
O2: (43.667,105.214,112.626)
C6: (45.273,102.070,112.689)
C5: (45.067,101.635,111.441)
O3': (44.769,104.461,117.341)
N3: (43.913,103.656,111.017)
OP1: (48.961,100.141,117.356)
OP2: (47.674,98.988,115.464)
C2: (44.099,104.131,112.286)
C1': (45.028,103.743,114.517)
C3': (45.394,103.307,116.797)
O5': (47.429,101.429,115.869)
O4': (46.413,103.913,114.729)
C5': (47.850,102.731,116.285)
P: (48.400,100.173,115.980)
C4': (46.713,103.715,116.142)
C2': (44.584,102.782,115.615)
O2': (43.188,102.849,115.812)
N1: (44.807,103.286,113.136)
O4: (44.077,102.178,109.342)
O2: (43.667,105.214,112.626)
C6: (45.273,102.070,112.689)
C5: (45.067,101.635,111.441)
O3': (44.769,104.461,117.341)
Image (generated by PyMOL):