Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1088:A1087
Extra
PDB:
ATOM 1 O3' U A1087 45.104 105.633 117.654 1.00 45.78 O
ATOM 2 P C A1088 45.136 105.959 119.216 1.00 48.35 P
ATOM 3 OP1 C A1088 44.577 107.324 119.448 1.00 47.62 O
ATOM 4 OP2 C A1088 46.512 105.640 119.664 1.00 45.95 O
ATOM 5 O5' C A1088 44.129 104.890 119.836 1.00 47.27 O
ATOM 6 C5' C A1088 42.934 105.292 120.526 1.00 46.75 C
ATOM 7 C4' C A1088 42.255 104.092 121.129 1.00 48.19 C
ATOM 8 O4' C A1088 42.037 103.093 120.108 1.00 48.01 O
ATOM 9 C3' C A1088 43.081 103.354 122.152 1.00 50.37 C
ATOM 10 O3' C A1088 42.992 104.011 123.396 1.00 54.78 O
ATOM 11 C2' C A1088 42.428 101.978 122.167 1.00 49.89 C
ATOM 12 O2' C A1088 41.227 101.956 122.912 1.00 49.00 O
ATOM 13 C1' C A1088 42.097 101.792 120.684 1.00 47.95 C
ATOM 14 N1 C A1088 43.092 100.982 119.941 1.00 46.97 N
ATOM 15 C2 C A1088 43.215 99.609 120.229 1.00 45.83 C
ATOM 16 O2 C A1088 42.453 99.093 121.061 1.00 46.49 O
ATOM 17 N3 C A1088 44.158 98.885 119.579 1.00 44.22 N
ATOM 18 C4 C A1088 44.941 99.469 118.668 1.00 44.08 C
ATOM 19 N4 C A1088 45.861 98.728 118.063 1.00 44.34 N
ATOM 20 C5 C A1088 44.818 100.845 118.339 1.00 44.84 C
ATOM 21 C6 C A1088 43.892 101.557 118.991 1.00 46.33 C
ATOM 22 P U A1089 44.256 104.810 123.950 1.00 58.02 P
ATOM 23 OP1 U A1089 43.902 105.179 125.336 1.00 56.87 O
ATOM 24 OP2 U A1089 44.641 105.869 122.973 1.00 58.38 O
ATOM 25 O5' U A1089 45.397 103.707 123.999 1.00 60.93 O
TER
ATOM 1 O3' C B1086 49.635 101.336 115.454 1.00 41.92 O
ATOM 2 P U B1087 48.409 101.061 116.426 1.00 42.93 P
ATOM 3 OP1 U B1087 49.064 101.010 117.731 1.00 43.74 O
ATOM 4 OP2 U B1087 47.680 99.870 115.915 1.00 43.80 O
ATOM 5 O5' U B1087 47.512 102.373 116.300 1.00 42.16 O
ATOM 6 C5' U B1087 48.050 103.662 116.646 1.00 44.44 C
ATOM 7 C4' U B1087 46.995 104.732 116.531 1.00 46.51 C
ATOM 8 O4' U B1087 46.710 104.995 115.130 1.00 47.46 O
ATOM 9 C3' U B1087 45.658 104.423 117.185 1.00 46.54 C
ATOM 10 O3' U B1087 45.104 105.633 117.654 1.00 45.78 O
ATOM 11 C2' U B1087 44.822 103.941 116.010 1.00 47.79 C
ATOM 12 O2' U B1087 43.446 104.166 116.190 1.00 49.31 O
ATOM 13 C1' U B1087 45.325 104.857 114.907 1.00 48.34 C
ATOM 14 N1 U B1087 45.092 104.354 113.547 1.00 50.69 N
ATOM 15 C2 U B1087 44.457 105.212 112.670 1.00 52.25 C
ATOM 16 O2 U B1087 44.102 106.326 112.986 1.00 54.74 O
ATOM 17 N3 U B1087 44.244 104.712 111.413 1.00 51.99 N
ATOM 18 C4 U B1087 44.577 103.465 110.956 1.00 52.80 C
ATOM 19 O4 U B1087 44.369 103.192 109.780 1.00 53.42 O
ATOM 20 C5 U B1087 45.228 102.620 111.918 1.00 52.74 C
ATOM 21 C6 U B1087 45.468 103.084 113.146 1.00 51.93 C
ATOM 22 P C B1088 45.136 105.959 119.216 1.00 48.35 P
ATOM 23 OP1 C B1088 44.577 107.324 119.448 1.00 47.62 O
ATOM 24 OP2 C B1088 46.512 105.640 119.664 1.00 45.95 O
ATOM 25 O5' C B1088 44.129 104.890 119.836 1.00 47.27 O
TER
ATOM 2 P C A1088 45.136 105.959 119.216 1.00 48.35 P
ATOM 3 OP1 C A1088 44.577 107.324 119.448 1.00 47.62 O
ATOM 4 OP2 C A1088 46.512 105.640 119.664 1.00 45.95 O
ATOM 5 O5' C A1088 44.129 104.890 119.836 1.00 47.27 O
ATOM 6 C5' C A1088 42.934 105.292 120.526 1.00 46.75 C
ATOM 7 C4' C A1088 42.255 104.092 121.129 1.00 48.19 C
ATOM 8 O4' C A1088 42.037 103.093 120.108 1.00 48.01 O
ATOM 9 C3' C A1088 43.081 103.354 122.152 1.00 50.37 C
ATOM 10 O3' C A1088 42.992 104.011 123.396 1.00 54.78 O
ATOM 11 C2' C A1088 42.428 101.978 122.167 1.00 49.89 C
ATOM 12 O2' C A1088 41.227 101.956 122.912 1.00 49.00 O
ATOM 13 C1' C A1088 42.097 101.792 120.684 1.00 47.95 C
ATOM 14 N1 C A1088 43.092 100.982 119.941 1.00 46.97 N
ATOM 15 C2 C A1088 43.215 99.609 120.229 1.00 45.83 C
ATOM 16 O2 C A1088 42.453 99.093 121.061 1.00 46.49 O
ATOM 17 N3 C A1088 44.158 98.885 119.579 1.00 44.22 N
ATOM 18 C4 C A1088 44.941 99.469 118.668 1.00 44.08 C
ATOM 19 N4 C A1088 45.861 98.728 118.063 1.00 44.34 N
ATOM 20 C5 C A1088 44.818 100.845 118.339 1.00 44.84 C
ATOM 21 C6 C A1088 43.892 101.557 118.991 1.00 46.33 C
ATOM 22 P U A1089 44.256 104.810 123.950 1.00 58.02 P
ATOM 23 OP1 U A1089 43.902 105.179 125.336 1.00 56.87 O
ATOM 24 OP2 U A1089 44.641 105.869 122.973 1.00 58.38 O
ATOM 25 O5' U A1089 45.397 103.707 123.999 1.00 60.93 O
TER
ATOM 1 O3' C B1086 49.635 101.336 115.454 1.00 41.92 O
ATOM 2 P U B1087 48.409 101.061 116.426 1.00 42.93 P
ATOM 3 OP1 U B1087 49.064 101.010 117.731 1.00 43.74 O
ATOM 4 OP2 U B1087 47.680 99.870 115.915 1.00 43.80 O
ATOM 5 O5' U B1087 47.512 102.373 116.300 1.00 42.16 O
ATOM 6 C5' U B1087 48.050 103.662 116.646 1.00 44.44 C
ATOM 7 C4' U B1087 46.995 104.732 116.531 1.00 46.51 C
ATOM 8 O4' U B1087 46.710 104.995 115.130 1.00 47.46 O
ATOM 9 C3' U B1087 45.658 104.423 117.185 1.00 46.54 C
ATOM 10 O3' U B1087 45.104 105.633 117.654 1.00 45.78 O
ATOM 11 C2' U B1087 44.822 103.941 116.010 1.00 47.79 C
ATOM 12 O2' U B1087 43.446 104.166 116.190 1.00 49.31 O
ATOM 13 C1' U B1087 45.325 104.857 114.907 1.00 48.34 C
ATOM 14 N1 U B1087 45.092 104.354 113.547 1.00 50.69 N
ATOM 15 C2 U B1087 44.457 105.212 112.670 1.00 52.25 C
ATOM 16 O2 U B1087 44.102 106.326 112.986 1.00 54.74 O
ATOM 17 N3 U B1087 44.244 104.712 111.413 1.00 51.99 N
ATOM 18 C4 U B1087 44.577 103.465 110.956 1.00 52.80 C
ATOM 19 O4 U B1087 44.369 103.192 109.780 1.00 53.42 O
ATOM 20 C5 U B1087 45.228 102.620 111.918 1.00 52.74 C
ATOM 21 C6 U B1087 45.468 103.084 113.146 1.00 51.93 C
ATOM 22 P C B1088 45.136 105.959 119.216 1.00 48.35 P
ATOM 23 OP1 C B1088 44.577 107.324 119.448 1.00 47.62 O
ATOM 24 OP2 C B1088 46.512 105.640 119.664 1.00 45.95 O
ATOM 25 O5' C B1088 44.129 104.890 119.836 1.00 47.27 O
TER
Atoms:
C2: (43.215,99.609,120.229)
OP1: (44.577,107.324,119.448)
OP2: (46.512,105.640,119.664)
C4: (44.941,99.469,118.668)
O5': (44.129,104.890,119.836)
C3': (43.081,103.354,122.152)
C1': (42.097,101.792,120.684)
O4': (42.037,103.093,120.108)
C5': (42.934,105.292,120.526)
P: (45.136,105.959,119.216)
O2: (42.453,99.093,121.061)
C4': (42.255,104.092,121.129)
C2': (42.428,101.978,122.167)
O2': (41.227,101.956,122.912)
N1: (43.092,100.982,119.941)
N3: (44.158,98.885,119.579)
N4: (45.861,98.728,118.063)
C6: (43.892,101.557,118.991)
C5: (44.818,100.845,118.339)
O3': (42.992,104.011,123.396)
OP1: (44.577,107.324,119.448)
OP2: (46.512,105.640,119.664)
C4: (44.941,99.469,118.668)
O5': (44.129,104.890,119.836)
C3': (43.081,103.354,122.152)
C1': (42.097,101.792,120.684)
O4': (42.037,103.093,120.108)
C5': (42.934,105.292,120.526)
P: (45.136,105.959,119.216)
O2: (42.453,99.093,121.061)
C4': (42.255,104.092,121.129)
C2': (42.428,101.978,122.167)
O2': (41.227,101.956,122.912)
N1: (43.092,100.982,119.941)
N3: (44.158,98.885,119.579)
N4: (45.861,98.728,118.063)
C6: (43.892,101.557,118.991)
C5: (44.818,100.845,118.339)
O3': (42.992,104.011,123.396)
C4: (44.577,103.465,110.956)
N3: (44.244,104.712,111.413)
OP1: (49.064,101.010,117.731)
OP2: (47.680,99.870,115.915)
C2: (44.457,105.212,112.670)
C1': (45.325,104.857,114.907)
C3': (45.658,104.423,117.185)
O5': (47.512,102.373,116.300)
O4': (46.710,104.995,115.130)
C5': (48.050,103.662,116.646)
P: (48.409,101.061,116.426)
C4': (46.995,104.732,116.531)
C2': (44.822,103.941,116.010)
O2': (43.446,104.166,116.190)
N1: (45.092,104.354,113.547)
O4: (44.369,103.192,109.780)
O2: (44.102,106.326,112.986)
C6: (45.468,103.084,113.146)
C5: (45.228,102.620,111.918)
O3': (45.104,105.633,117.654)
N3: (44.244,104.712,111.413)
OP1: (49.064,101.010,117.731)
OP2: (47.680,99.870,115.915)
C2: (44.457,105.212,112.670)
C1': (45.325,104.857,114.907)
C3': (45.658,104.423,117.185)
O5': (47.512,102.373,116.300)
O4': (46.710,104.995,115.130)
C5': (48.050,103.662,116.646)
P: (48.409,101.061,116.426)
C4': (46.995,104.732,116.531)
C2': (44.822,103.941,116.010)
O2': (43.446,104.166,116.190)
N1: (45.092,104.354,113.547)
O4: (44.369,103.192,109.780)
O2: (44.102,106.326,112.986)
C6: (45.468,103.084,113.146)
C5: (45.228,102.620,111.918)
O3': (45.104,105.633,117.654)
Image (generated by PyMOL):