Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:W59:W58
Extra
PDB:
ATOM 1 O3' U A 58 126.792 -26.740 11.523 1.00100.02 O
ATOM 2 P C A 59 125.981 -28.119 11.625 1.00100.60 P
ATOM 3 OP1 C A 59 125.167 -28.239 10.382 1.00 98.86 O
ATOM 4 OP2 C A 59 125.304 -28.156 12.951 1.00 99.35 O
ATOM 5 O5' C A 59 127.129 -29.230 11.608 1.00102.25 O
ATOM 6 C5' C A 59 127.464 -29.943 10.411 1.00103.38 C
ATOM 7 C4' C A 59 127.927 -31.346 10.751 1.00104.51 C
ATOM 8 O4' C A 59 129.135 -31.256 11.552 1.00105.10 O
ATOM 9 C3' C A 59 126.967 -32.159 11.612 1.00105.30 C
ATOM 10 O3' C A 59 125.932 -32.792 10.870 1.00107.15 O
ATOM 11 C2' C A 59 127.891 -33.132 12.333 1.00104.66 C
ATOM 12 O2' C A 59 128.246 -34.278 11.578 1.00102.09 O
ATOM 13 C1' C A 59 129.116 -32.249 12.572 1.00105.34 C
ATOM 14 N1 C A 59 129.059 -31.565 13.886 1.00106.01 N
ATOM 15 C2 C A 59 129.263 -32.316 15.057 1.00105.89 C
ATOM 16 O2 C A 59 129.491 -33.537 14.964 1.00105.74 O
ATOM 17 N3 C A 59 129.201 -31.693 16.256 1.00106.42 N
ATOM 18 C4 C A 59 128.946 -30.383 16.317 1.00107.64 C
ATOM 19 N4 C A 59 128.890 -29.812 17.520 1.00108.85 N
ATOM 20 C5 C A 59 128.737 -29.600 15.147 1.00107.06 C
ATOM 21 C6 C A 59 128.804 -30.222 13.967 1.00106.44 C
ATOM 22 P C A 60 124.434 -32.843 11.477 1.00108.06 P
ATOM 23 OP1 C A 60 123.466 -32.713 10.344 1.00107.85 O
ATOM 24 OP2 C A 60 124.348 -31.895 12.635 1.00106.67 O
ATOM 25 O5' C A 60 124.315 -34.309 12.098 1.00104.05 O
TER
ATOM 1 O3' A B 57 127.949 -25.372 18.227 1.00106.45 O
ATOM 2 P U B 58 127.769 -26.589 17.183 1.00104.21 P
ATOM 3 OP1 U B 58 126.991 -27.670 17.835 1.00104.21 O
ATOM 4 OP2 U B 58 129.107 -26.899 16.622 1.00103.74 O
ATOM 5 O5' U B 58 126.883 -25.966 16.012 1.00103.55 O
ATOM 6 C5' U B 58 126.782 -26.625 14.755 1.00101.47 C
ATOM 7 C4' U B 58 127.189 -25.698 13.634 1.00 99.93 C
ATOM 8 O4' U B 58 128.197 -24.773 14.090 1.00 99.88 O
ATOM 9 C3' U B 58 127.812 -26.440 12.465 1.00 99.46 C
ATOM 10 O3' U B 58 126.792 -26.740 11.523 1.00100.02 O
ATOM 11 C2' U B 58 128.788 -25.434 11.859 1.00 99.56 C
ATOM 12 O2' U B 58 128.257 -24.711 10.779 1.00 99.65 O
ATOM 13 C1' U B 58 129.072 -24.476 13.023 1.00100.05 C
ATOM 14 N1 U B 58 130.452 -24.394 13.532 1.00100.37 N
ATOM 15 C2 U B 58 131.502 -24.380 12.616 1.00101.14 C
ATOM 16 O2 U B 58 131.339 -24.471 11.404 1.00100.44 O
ATOM 17 N3 U B 58 132.753 -24.254 13.176 1.00102.76 N
ATOM 18 C4 U B 58 133.060 -24.144 14.527 1.00103.03 C
ATOM 19 O4 U B 58 134.240 -23.988 14.879 1.00103.60 O
ATOM 20 C5 U B 58 131.924 -24.187 15.401 1.00101.83 C
ATOM 21 C6 U B 58 130.697 -24.309 14.889 1.00100.73 C
ATOM 22 P C B 59 125.981 -28.119 11.625 1.00100.60 P
ATOM 23 OP1 C B 59 125.167 -28.239 10.382 1.00 98.86 O
ATOM 24 OP2 C B 59 125.304 -28.156 12.951 1.00 99.35 O
ATOM 25 O5' C B 59 127.129 -29.230 11.608 1.00102.25 O
TER
ATOM 2 P C A 59 125.981 -28.119 11.625 1.00100.60 P
ATOM 3 OP1 C A 59 125.167 -28.239 10.382 1.00 98.86 O
ATOM 4 OP2 C A 59 125.304 -28.156 12.951 1.00 99.35 O
ATOM 5 O5' C A 59 127.129 -29.230 11.608 1.00102.25 O
ATOM 6 C5' C A 59 127.464 -29.943 10.411 1.00103.38 C
ATOM 7 C4' C A 59 127.927 -31.346 10.751 1.00104.51 C
ATOM 8 O4' C A 59 129.135 -31.256 11.552 1.00105.10 O
ATOM 9 C3' C A 59 126.967 -32.159 11.612 1.00105.30 C
ATOM 10 O3' C A 59 125.932 -32.792 10.870 1.00107.15 O
ATOM 11 C2' C A 59 127.891 -33.132 12.333 1.00104.66 C
ATOM 12 O2' C A 59 128.246 -34.278 11.578 1.00102.09 O
ATOM 13 C1' C A 59 129.116 -32.249 12.572 1.00105.34 C
ATOM 14 N1 C A 59 129.059 -31.565 13.886 1.00106.01 N
ATOM 15 C2 C A 59 129.263 -32.316 15.057 1.00105.89 C
ATOM 16 O2 C A 59 129.491 -33.537 14.964 1.00105.74 O
ATOM 17 N3 C A 59 129.201 -31.693 16.256 1.00106.42 N
ATOM 18 C4 C A 59 128.946 -30.383 16.317 1.00107.64 C
ATOM 19 N4 C A 59 128.890 -29.812 17.520 1.00108.85 N
ATOM 20 C5 C A 59 128.737 -29.600 15.147 1.00107.06 C
ATOM 21 C6 C A 59 128.804 -30.222 13.967 1.00106.44 C
ATOM 22 P C A 60 124.434 -32.843 11.477 1.00108.06 P
ATOM 23 OP1 C A 60 123.466 -32.713 10.344 1.00107.85 O
ATOM 24 OP2 C A 60 124.348 -31.895 12.635 1.00106.67 O
ATOM 25 O5' C A 60 124.315 -34.309 12.098 1.00104.05 O
TER
ATOM 1 O3' A B 57 127.949 -25.372 18.227 1.00106.45 O
ATOM 2 P U B 58 127.769 -26.589 17.183 1.00104.21 P
ATOM 3 OP1 U B 58 126.991 -27.670 17.835 1.00104.21 O
ATOM 4 OP2 U B 58 129.107 -26.899 16.622 1.00103.74 O
ATOM 5 O5' U B 58 126.883 -25.966 16.012 1.00103.55 O
ATOM 6 C5' U B 58 126.782 -26.625 14.755 1.00101.47 C
ATOM 7 C4' U B 58 127.189 -25.698 13.634 1.00 99.93 C
ATOM 8 O4' U B 58 128.197 -24.773 14.090 1.00 99.88 O
ATOM 9 C3' U B 58 127.812 -26.440 12.465 1.00 99.46 C
ATOM 10 O3' U B 58 126.792 -26.740 11.523 1.00100.02 O
ATOM 11 C2' U B 58 128.788 -25.434 11.859 1.00 99.56 C
ATOM 12 O2' U B 58 128.257 -24.711 10.779 1.00 99.65 O
ATOM 13 C1' U B 58 129.072 -24.476 13.023 1.00100.05 C
ATOM 14 N1 U B 58 130.452 -24.394 13.532 1.00100.37 N
ATOM 15 C2 U B 58 131.502 -24.380 12.616 1.00101.14 C
ATOM 16 O2 U B 58 131.339 -24.471 11.404 1.00100.44 O
ATOM 17 N3 U B 58 132.753 -24.254 13.176 1.00102.76 N
ATOM 18 C4 U B 58 133.060 -24.144 14.527 1.00103.03 C
ATOM 19 O4 U B 58 134.240 -23.988 14.879 1.00103.60 O
ATOM 20 C5 U B 58 131.924 -24.187 15.401 1.00101.83 C
ATOM 21 C6 U B 58 130.697 -24.309 14.889 1.00100.73 C
ATOM 22 P C B 59 125.981 -28.119 11.625 1.00100.60 P
ATOM 23 OP1 C B 59 125.167 -28.239 10.382 1.00 98.86 O
ATOM 24 OP2 C B 59 125.304 -28.156 12.951 1.00 99.35 O
ATOM 25 O5' C B 59 127.129 -29.230 11.608 1.00102.25 O
TER
Atoms:
C2: (129.263,-32.316,15.057)
OP1: (125.167,-28.239,10.382)
OP2: (125.304,-28.156,12.951)
C4: (128.946,-30.383,16.317)
O5': (127.129,-29.230,11.608)
C3': (126.967,-32.159,11.612)
C1': (129.116,-32.249,12.572)
O4': (129.135,-31.256,11.552)
C5': (127.464,-29.943,10.411)
P: (125.981,-28.119,11.625)
O2: (129.491,-33.537,14.964)
C4': (127.927,-31.346,10.751)
C2': (127.891,-33.132,12.333)
O2': (128.246,-34.278,11.578)
N1: (129.059,-31.565,13.886)
N3: (129.201,-31.693,16.256)
N4: (128.890,-29.812,17.520)
C6: (128.804,-30.222,13.967)
C5: (128.737,-29.600,15.147)
O3': (125.932,-32.792,10.870)
OP1: (125.167,-28.239,10.382)
OP2: (125.304,-28.156,12.951)
C4: (128.946,-30.383,16.317)
O5': (127.129,-29.230,11.608)
C3': (126.967,-32.159,11.612)
C1': (129.116,-32.249,12.572)
O4': (129.135,-31.256,11.552)
C5': (127.464,-29.943,10.411)
P: (125.981,-28.119,11.625)
O2: (129.491,-33.537,14.964)
C4': (127.927,-31.346,10.751)
C2': (127.891,-33.132,12.333)
O2': (128.246,-34.278,11.578)
N1: (129.059,-31.565,13.886)
N3: (129.201,-31.693,16.256)
N4: (128.890,-29.812,17.520)
C6: (128.804,-30.222,13.967)
C5: (128.737,-29.600,15.147)
O3': (125.932,-32.792,10.870)
C4: (133.060,-24.144,14.527)
N3: (132.753,-24.254,13.176)
OP1: (126.991,-27.670,17.835)
OP2: (129.107,-26.899,16.622)
C2: (131.502,-24.380,12.616)
C1': (129.072,-24.476,13.023)
C3': (127.812,-26.440,12.465)
O5': (126.883,-25.966,16.012)
O4': (128.197,-24.773,14.090)
C5': (126.782,-26.625,14.755)
P: (127.769,-26.589,17.183)
C4': (127.189,-25.698,13.634)
C2': (128.788,-25.434,11.859)
O2': (128.257,-24.711,10.779)
N1: (130.452,-24.394,13.532)
O4: (134.240,-23.988,14.879)
O2: (131.339,-24.471,11.404)
C6: (130.697,-24.309,14.889)
C5: (131.924,-24.187,15.401)
O3': (126.792,-26.740,11.523)
N3: (132.753,-24.254,13.176)
OP1: (126.991,-27.670,17.835)
OP2: (129.107,-26.899,16.622)
C2: (131.502,-24.380,12.616)
C1': (129.072,-24.476,13.023)
C3': (127.812,-26.440,12.465)
O5': (126.883,-25.966,16.012)
O4': (128.197,-24.773,14.090)
C5': (126.782,-26.625,14.755)
P: (127.769,-26.589,17.183)
C4': (127.189,-25.698,13.634)
C2': (128.788,-25.434,11.859)
O2': (128.257,-24.711,10.779)
N1: (130.452,-24.394,13.532)
O4: (134.240,-23.988,14.879)
O2: (131.339,-24.471,11.404)
C6: (130.697,-24.309,14.889)
C5: (131.924,-24.187,15.401)
O3': (126.792,-26.740,11.523)
Image (generated by PyMOL):