Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.442 120.775 103.968 1.00 35.17 O
ATOM 2 P C A2023 34.493 119.971 104.990 1.00 34.15 P
ATOM 3 OP1 C A2023 33.120 119.956 104.412 1.00 35.53 O
ATOM 4 OP2 C A2023 34.703 120.552 106.337 1.00 35.65 O
ATOM 5 O5' C A2023 35.095 118.491 105.000 1.00 31.76 O
ATOM 6 C5' C A2023 34.566 117.465 104.133 1.00 31.21 C
ATOM 7 C4' C A2023 34.978 116.094 104.623 1.00 29.96 C
ATOM 8 O4' C A2023 36.410 115.914 104.499 1.00 30.45 O
ATOM 9 C3' C A2023 34.676 115.846 106.080 1.00 30.30 C
ATOM 10 O3' C A2023 33.350 115.385 106.188 1.00 32.78 O
ATOM 11 C2' C A2023 35.708 114.797 106.467 1.00 30.90 C
ATOM 12 O2' C A2023 35.353 113.497 106.055 1.00 33.07 O
ATOM 13 C1' C A2023 36.914 115.243 105.641 1.00 29.53 C
ATOM 14 N1 C A2023 37.824 116.172 106.335 1.00 31.07 N
ATOM 15 C2 C A2023 38.664 115.694 107.356 1.00 32.86 C
ATOM 16 O2 C A2023 38.596 114.497 107.699 1.00 34.62 O
ATOM 17 N3 C A2023 39.524 116.554 107.949 1.00 33.37 N
ATOM 18 C4 C A2023 39.554 117.835 107.572 1.00 30.44 C
ATOM 19 N4 C A2023 40.413 118.649 108.179 1.00 31.21 N
ATOM 20 C5 C A2023 38.703 118.340 106.557 1.00 30.44 C
ATOM 21 C6 C A2023 37.863 117.489 105.974 1.00 29.70 C
ATOM 22 P U A2024 32.380 116.008 107.300 1.00 36.17 P
ATOM 23 OP1 U A2024 31.011 115.497 106.985 1.00 37.16 O
ATOM 24 OP2 U A2024 32.614 117.477 107.394 1.00 36.59 O
ATOM 25 O5' U A2024 32.890 115.323 108.643 1.00 34.26 O
TER
ATOM 1 O3' G B2021 40.415 123.654 107.265 1.00 32.15 O
ATOM 2 P U B2022 40.337 122.141 106.727 1.00 33.80 P
ATOM 3 OP1 U B2022 39.975 121.296 107.887 1.00 33.07 O
ATOM 4 OP2 U B2022 41.576 121.841 105.966 1.00 33.63 O
ATOM 5 O5' U B2022 39.135 122.150 105.683 1.00 30.87 O
ATOM 6 C5' U B2022 37.845 122.642 106.044 1.00 31.88 C
ATOM 7 C4' U B2022 36.885 122.454 104.897 1.00 33.11 C
ATOM 8 O4' U B2022 37.284 123.311 103.786 1.00 34.49 O
ATOM 9 C3' U B2022 36.795 121.040 104.330 1.00 34.45 C
ATOM 10 O3' U B2022 35.442 120.775 103.968 1.00 35.17 O
ATOM 11 C2' U B2022 37.691 121.115 103.093 1.00 33.45 C
ATOM 12 O2' U B2022 37.351 120.200 102.067 1.00 36.68 O
ATOM 13 C1' U B2022 37.425 122.535 102.612 1.00 32.95 C
ATOM 14 N1 U B2022 38.522 123.079 101.794 1.00 33.00 N
ATOM 15 C2 U B2022 38.245 123.424 100.473 1.00 33.92 C
ATOM 16 O2 U B2022 37.126 123.372 99.991 1.00 33.64 O
ATOM 17 N3 U B2022 39.334 123.837 99.737 1.00 33.44 N
ATOM 18 C4 U B2022 40.642 123.956 100.180 1.00 33.04 C
ATOM 19 O4 U B2022 41.525 124.303 99.391 1.00 33.21 O
ATOM 20 C5 U B2022 40.832 123.645 101.563 1.00 33.01 C
ATOM 21 C6 U B2022 39.795 123.223 102.304 1.00 33.09 C
ATOM 22 P C B2023 34.493 119.971 104.990 1.00 34.15 P
ATOM 23 OP1 C B2023 33.120 119.956 104.412 1.00 35.53 O
ATOM 24 OP2 C B2023 34.703 120.552 106.337 1.00 35.65 O
ATOM 25 O5' C B2023 35.095 118.491 105.000 1.00 31.76 O
TER
ATOM 2 P C A2023 34.493 119.971 104.990 1.00 34.15 P
ATOM 3 OP1 C A2023 33.120 119.956 104.412 1.00 35.53 O
ATOM 4 OP2 C A2023 34.703 120.552 106.337 1.00 35.65 O
ATOM 5 O5' C A2023 35.095 118.491 105.000 1.00 31.76 O
ATOM 6 C5' C A2023 34.566 117.465 104.133 1.00 31.21 C
ATOM 7 C4' C A2023 34.978 116.094 104.623 1.00 29.96 C
ATOM 8 O4' C A2023 36.410 115.914 104.499 1.00 30.45 O
ATOM 9 C3' C A2023 34.676 115.846 106.080 1.00 30.30 C
ATOM 10 O3' C A2023 33.350 115.385 106.188 1.00 32.78 O
ATOM 11 C2' C A2023 35.708 114.797 106.467 1.00 30.90 C
ATOM 12 O2' C A2023 35.353 113.497 106.055 1.00 33.07 O
ATOM 13 C1' C A2023 36.914 115.243 105.641 1.00 29.53 C
ATOM 14 N1 C A2023 37.824 116.172 106.335 1.00 31.07 N
ATOM 15 C2 C A2023 38.664 115.694 107.356 1.00 32.86 C
ATOM 16 O2 C A2023 38.596 114.497 107.699 1.00 34.62 O
ATOM 17 N3 C A2023 39.524 116.554 107.949 1.00 33.37 N
ATOM 18 C4 C A2023 39.554 117.835 107.572 1.00 30.44 C
ATOM 19 N4 C A2023 40.413 118.649 108.179 1.00 31.21 N
ATOM 20 C5 C A2023 38.703 118.340 106.557 1.00 30.44 C
ATOM 21 C6 C A2023 37.863 117.489 105.974 1.00 29.70 C
ATOM 22 P U A2024 32.380 116.008 107.300 1.00 36.17 P
ATOM 23 OP1 U A2024 31.011 115.497 106.985 1.00 37.16 O
ATOM 24 OP2 U A2024 32.614 117.477 107.394 1.00 36.59 O
ATOM 25 O5' U A2024 32.890 115.323 108.643 1.00 34.26 O
TER
ATOM 1 O3' G B2021 40.415 123.654 107.265 1.00 32.15 O
ATOM 2 P U B2022 40.337 122.141 106.727 1.00 33.80 P
ATOM 3 OP1 U B2022 39.975 121.296 107.887 1.00 33.07 O
ATOM 4 OP2 U B2022 41.576 121.841 105.966 1.00 33.63 O
ATOM 5 O5' U B2022 39.135 122.150 105.683 1.00 30.87 O
ATOM 6 C5' U B2022 37.845 122.642 106.044 1.00 31.88 C
ATOM 7 C4' U B2022 36.885 122.454 104.897 1.00 33.11 C
ATOM 8 O4' U B2022 37.284 123.311 103.786 1.00 34.49 O
ATOM 9 C3' U B2022 36.795 121.040 104.330 1.00 34.45 C
ATOM 10 O3' U B2022 35.442 120.775 103.968 1.00 35.17 O
ATOM 11 C2' U B2022 37.691 121.115 103.093 1.00 33.45 C
ATOM 12 O2' U B2022 37.351 120.200 102.067 1.00 36.68 O
ATOM 13 C1' U B2022 37.425 122.535 102.612 1.00 32.95 C
ATOM 14 N1 U B2022 38.522 123.079 101.794 1.00 33.00 N
ATOM 15 C2 U B2022 38.245 123.424 100.473 1.00 33.92 C
ATOM 16 O2 U B2022 37.126 123.372 99.991 1.00 33.64 O
ATOM 17 N3 U B2022 39.334 123.837 99.737 1.00 33.44 N
ATOM 18 C4 U B2022 40.642 123.956 100.180 1.00 33.04 C
ATOM 19 O4 U B2022 41.525 124.303 99.391 1.00 33.21 O
ATOM 20 C5 U B2022 40.832 123.645 101.563 1.00 33.01 C
ATOM 21 C6 U B2022 39.795 123.223 102.304 1.00 33.09 C
ATOM 22 P C B2023 34.493 119.971 104.990 1.00 34.15 P
ATOM 23 OP1 C B2023 33.120 119.956 104.412 1.00 35.53 O
ATOM 24 OP2 C B2023 34.703 120.552 106.337 1.00 35.65 O
ATOM 25 O5' C B2023 35.095 118.491 105.000 1.00 31.76 O
TER
Atoms:
C2: (38.664,115.694,107.356)
OP1: (33.120,119.956,104.412)
OP2: (34.703,120.552,106.337)
C4: (39.554,117.835,107.572)
O5': (35.095,118.491,105.000)
C3': (34.676,115.846,106.080)
C1': (36.914,115.243,105.641)
O4': (36.410,115.914,104.499)
C5': (34.566,117.465,104.133)
P: (34.493,119.971,104.990)
O2: (38.596,114.497,107.699)
C4': (34.978,116.094,104.623)
C2': (35.708,114.797,106.467)
O2': (35.353,113.497,106.055)
N1: (37.824,116.172,106.335)
N3: (39.524,116.554,107.949)
N4: (40.413,118.649,108.179)
C6: (37.863,117.489,105.974)
C5: (38.703,118.340,106.557)
O3': (33.350,115.385,106.188)
OP1: (33.120,119.956,104.412)
OP2: (34.703,120.552,106.337)
C4: (39.554,117.835,107.572)
O5': (35.095,118.491,105.000)
C3': (34.676,115.846,106.080)
C1': (36.914,115.243,105.641)
O4': (36.410,115.914,104.499)
C5': (34.566,117.465,104.133)
P: (34.493,119.971,104.990)
O2: (38.596,114.497,107.699)
C4': (34.978,116.094,104.623)
C2': (35.708,114.797,106.467)
O2': (35.353,113.497,106.055)
N1: (37.824,116.172,106.335)
N3: (39.524,116.554,107.949)
N4: (40.413,118.649,108.179)
C6: (37.863,117.489,105.974)
C5: (38.703,118.340,106.557)
O3': (33.350,115.385,106.188)
C4: (40.642,123.956,100.180)
N3: (39.334,123.837,99.737)
OP1: (39.975,121.296,107.887)
OP2: (41.576,121.841,105.966)
C2: (38.245,123.424,100.473)
C1': (37.425,122.535,102.612)
C3': (36.795,121.040,104.330)
O5': (39.135,122.150,105.683)
O4': (37.284,123.311,103.786)
C5': (37.845,122.642,106.044)
P: (40.337,122.141,106.727)
C4': (36.885,122.454,104.897)
C2': (37.691,121.115,103.093)
O2': (37.351,120.200,102.067)
N1: (38.522,123.079,101.794)
O4: (41.525,124.303,99.391)
O2: (37.126,123.372,99.991)
C6: (39.795,123.223,102.304)
C5: (40.832,123.645,101.563)
O3': (35.442,120.775,103.968)
N3: (39.334,123.837,99.737)
OP1: (39.975,121.296,107.887)
OP2: (41.576,121.841,105.966)
C2: (38.245,123.424,100.473)
C1': (37.425,122.535,102.612)
C3': (36.795,121.040,104.330)
O5': (39.135,122.150,105.683)
O4': (37.284,123.311,103.786)
C5': (37.845,122.642,106.044)
P: (40.337,122.141,106.727)
C4': (36.885,122.454,104.897)
C2': (37.691,121.115,103.093)
O2': (37.351,120.200,102.067)
N1: (38.522,123.079,101.794)
O4: (41.525,124.303,99.391)
O2: (37.126,123.372,99.991)
C6: (39.795,123.223,102.304)
C5: (40.832,123.645,101.563)
O3': (35.442,120.775,103.968)
Image (generated by PyMOL):