Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.488 94.106 114.642 1.00 40.79 O
ATOM 2 P C A1085 43.862 94.675 115.246 1.00 43.05 P
ATOM 3 OP1 C A1085 44.898 93.673 114.883 1.00 42.05 O
ATOM 4 OP2 C A1085 43.666 95.039 116.671 1.00 43.39 O
ATOM 5 O5' C A1085 44.114 96.016 114.424 1.00 42.01 O
ATOM 6 C5' C A1085 44.080 96.010 112.986 1.00 43.83 C
ATOM 7 C4' C A1085 44.108 97.423 112.449 1.00 44.87 C
ATOM 8 O4' C A1085 42.961 98.144 112.978 1.00 45.00 O
ATOM 9 C3' C A1085 45.335 98.259 112.798 1.00 44.45 C
ATOM 10 O3' C A1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 11 C2' C A1085 44.871 99.032 114.032 1.00 44.92 C
ATOM 12 O2' C A1085 45.552 100.254 114.242 1.00 45.95 O
ATOM 13 C1' C A1085 43.397 99.271 113.712 1.00 44.48 C
ATOM 14 N1 C A1085 42.532 99.384 114.896 1.00 42.77 N
ATOM 15 C2 C A1085 41.819 100.577 115.118 1.00 42.99 C
ATOM 16 O2 C A1085 41.974 101.537 114.345 1.00 41.59 O
ATOM 17 N3 C A1085 40.980 100.651 116.173 1.00 44.37 N
ATOM 18 C4 C A1085 40.846 99.606 116.997 1.00 45.01 C
ATOM 19 N4 C A1085 39.993 99.719 118.013 1.00 46.66 N
ATOM 20 C5 C A1085 41.579 98.398 116.811 1.00 44.66 C
ATOM 21 C6 C A1085 42.403 98.332 115.761 1.00 44.18 C
ATOM 22 P C A1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 23 OP1 C A1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 24 OP2 C A1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 25 O5' C A1086 47.999 99.882 112.104 1.00 43.27 O
TER
ATOM 1 O3' A B1083 38.356 94.879 119.092 1.00 34.43 O
ATOM 2 P U B1084 39.742 95.654 118.924 1.00 32.22 P
ATOM 3 OP1 U B1084 40.743 95.044 119.829 1.00 32.99 O
ATOM 4 OP2 U B1084 39.445 97.092 119.033 1.00 32.22 O
ATOM 5 O5' U B1084 40.134 95.357 117.412 1.00 34.70 O
ATOM 6 C5' U B1084 40.239 94.003 116.929 1.00 36.71 C
ATOM 7 C4' U B1084 40.229 93.987 115.423 1.00 38.39 C
ATOM 8 O4' U B1084 38.970 94.517 114.947 1.00 39.48 O
ATOM 9 C3' U B1084 41.286 94.857 114.769 1.00 39.44 C
ATOM 10 O3' U B1084 42.488 94.106 114.642 1.00 40.79 O
ATOM 11 C2' U B1084 40.670 95.155 113.407 1.00 39.85 C
ATOM 12 O2' U B1084 40.850 94.086 112.501 1.00 42.17 O
ATOM 13 C1' U B1084 39.181 95.244 113.754 1.00 38.70 C
ATOM 14 N1 U B1084 38.640 96.596 113.942 1.00 38.17 N
ATOM 15 C2 U B1084 38.130 97.253 112.835 1.00 38.44 C
ATOM 16 O2 U B1084 38.163 96.783 111.711 1.00 40.92 O
ATOM 17 N3 U B1084 37.583 98.484 113.092 1.00 36.92 N
ATOM 18 C4 U B1084 37.502 99.112 114.312 1.00 39.02 C
ATOM 19 O4 U B1084 36.892 100.176 114.407 1.00 42.30 O
ATOM 20 C5 U B1084 38.081 98.383 115.395 1.00 40.01 C
ATOM 21 C6 U B1084 38.618 97.183 115.179 1.00 38.79 C
ATOM 22 P C B1085 43.862 94.675 115.246 1.00 43.05 P
ATOM 23 OP1 C B1085 44.898 93.673 114.883 1.00 42.05 O
ATOM 24 OP2 C B1085 43.666 95.039 116.671 1.00 43.39 O
ATOM 25 O5' C B1085 44.114 96.016 114.424 1.00 42.01 O
TER
ATOM 2 P C A1085 43.862 94.675 115.246 1.00 43.05 P
ATOM 3 OP1 C A1085 44.898 93.673 114.883 1.00 42.05 O
ATOM 4 OP2 C A1085 43.666 95.039 116.671 1.00 43.39 O
ATOM 5 O5' C A1085 44.114 96.016 114.424 1.00 42.01 O
ATOM 6 C5' C A1085 44.080 96.010 112.986 1.00 43.83 C
ATOM 7 C4' C A1085 44.108 97.423 112.449 1.00 44.87 C
ATOM 8 O4' C A1085 42.961 98.144 112.978 1.00 45.00 O
ATOM 9 C3' C A1085 45.335 98.259 112.798 1.00 44.45 C
ATOM 10 O3' C A1085 45.647 99.117 111.700 1.00 43.50 O
ATOM 11 C2' C A1085 44.871 99.032 114.032 1.00 44.92 C
ATOM 12 O2' C A1085 45.552 100.254 114.242 1.00 45.95 O
ATOM 13 C1' C A1085 43.397 99.271 113.712 1.00 44.48 C
ATOM 14 N1 C A1085 42.532 99.384 114.896 1.00 42.77 N
ATOM 15 C2 C A1085 41.819 100.577 115.118 1.00 42.99 C
ATOM 16 O2 C A1085 41.974 101.537 114.345 1.00 41.59 O
ATOM 17 N3 C A1085 40.980 100.651 116.173 1.00 44.37 N
ATOM 18 C4 C A1085 40.846 99.606 116.997 1.00 45.01 C
ATOM 19 N4 C A1085 39.993 99.719 118.013 1.00 46.66 N
ATOM 20 C5 C A1085 41.579 98.398 116.811 1.00 44.66 C
ATOM 21 C6 C A1085 42.403 98.332 115.761 1.00 44.18 C
ATOM 22 P C A1086 47.124 99.077 111.051 1.00 44.97 P
ATOM 23 OP1 C A1086 47.117 99.869 109.794 1.00 45.84 O
ATOM 24 OP2 C A1086 47.585 97.667 111.018 1.00 43.89 O
ATOM 25 O5' C A1086 47.999 99.882 112.104 1.00 43.27 O
TER
ATOM 1 O3' A B1083 38.356 94.879 119.092 1.00 34.43 O
ATOM 2 P U B1084 39.742 95.654 118.924 1.00 32.22 P
ATOM 3 OP1 U B1084 40.743 95.044 119.829 1.00 32.99 O
ATOM 4 OP2 U B1084 39.445 97.092 119.033 1.00 32.22 O
ATOM 5 O5' U B1084 40.134 95.357 117.412 1.00 34.70 O
ATOM 6 C5' U B1084 40.239 94.003 116.929 1.00 36.71 C
ATOM 7 C4' U B1084 40.229 93.987 115.423 1.00 38.39 C
ATOM 8 O4' U B1084 38.970 94.517 114.947 1.00 39.48 O
ATOM 9 C3' U B1084 41.286 94.857 114.769 1.00 39.44 C
ATOM 10 O3' U B1084 42.488 94.106 114.642 1.00 40.79 O
ATOM 11 C2' U B1084 40.670 95.155 113.407 1.00 39.85 C
ATOM 12 O2' U B1084 40.850 94.086 112.501 1.00 42.17 O
ATOM 13 C1' U B1084 39.181 95.244 113.754 1.00 38.70 C
ATOM 14 N1 U B1084 38.640 96.596 113.942 1.00 38.17 N
ATOM 15 C2 U B1084 38.130 97.253 112.835 1.00 38.44 C
ATOM 16 O2 U B1084 38.163 96.783 111.711 1.00 40.92 O
ATOM 17 N3 U B1084 37.583 98.484 113.092 1.00 36.92 N
ATOM 18 C4 U B1084 37.502 99.112 114.312 1.00 39.02 C
ATOM 19 O4 U B1084 36.892 100.176 114.407 1.00 42.30 O
ATOM 20 C5 U B1084 38.081 98.383 115.395 1.00 40.01 C
ATOM 21 C6 U B1084 38.618 97.183 115.179 1.00 38.79 C
ATOM 22 P C B1085 43.862 94.675 115.246 1.00 43.05 P
ATOM 23 OP1 C B1085 44.898 93.673 114.883 1.00 42.05 O
ATOM 24 OP2 C B1085 43.666 95.039 116.671 1.00 43.39 O
ATOM 25 O5' C B1085 44.114 96.016 114.424 1.00 42.01 O
TER
Atoms:
C2: (41.819,100.577,115.118)
OP1: (44.898,93.673,114.883)
OP2: (43.666,95.039,116.671)
C4: (40.846,99.606,116.997)
O5': (44.114,96.016,114.424)
C3': (45.335,98.259,112.798)
C1': (43.397,99.271,113.712)
O4': (42.961,98.144,112.978)
C5': (44.080,96.010,112.986)
P: (43.862,94.675,115.246)
O2: (41.974,101.537,114.345)
C4': (44.108,97.423,112.449)
C2': (44.871,99.032,114.032)
O2': (45.552,100.254,114.242)
N1: (42.532,99.384,114.896)
N3: (40.980,100.651,116.173)
N4: (39.993,99.719,118.013)
C6: (42.403,98.332,115.761)
C5: (41.579,98.398,116.811)
O3': (45.647,99.117,111.700)
OP1: (44.898,93.673,114.883)
OP2: (43.666,95.039,116.671)
C4: (40.846,99.606,116.997)
O5': (44.114,96.016,114.424)
C3': (45.335,98.259,112.798)
C1': (43.397,99.271,113.712)
O4': (42.961,98.144,112.978)
C5': (44.080,96.010,112.986)
P: (43.862,94.675,115.246)
O2: (41.974,101.537,114.345)
C4': (44.108,97.423,112.449)
C2': (44.871,99.032,114.032)
O2': (45.552,100.254,114.242)
N1: (42.532,99.384,114.896)
N3: (40.980,100.651,116.173)
N4: (39.993,99.719,118.013)
C6: (42.403,98.332,115.761)
C5: (41.579,98.398,116.811)
O3': (45.647,99.117,111.700)
C4: (37.502,99.112,114.312)
N3: (37.583,98.484,113.092)
OP1: (40.743,95.044,119.829)
OP2: (39.445,97.092,119.033)
C2: (38.130,97.253,112.835)
C1': (39.181,95.244,113.754)
C3': (41.286,94.857,114.769)
O5': (40.134,95.357,117.412)
O4': (38.970,94.517,114.947)
C5': (40.239,94.003,116.929)
P: (39.742,95.654,118.924)
C4': (40.229,93.987,115.423)
C2': (40.670,95.155,113.407)
O2': (40.850,94.086,112.501)
N1: (38.640,96.596,113.942)
O4: (36.892,100.176,114.407)
O2: (38.163,96.783,111.711)
C6: (38.618,97.183,115.179)
C5: (38.081,98.383,115.395)
O3': (42.488,94.106,114.642)
N3: (37.583,98.484,113.092)
OP1: (40.743,95.044,119.829)
OP2: (39.445,97.092,119.033)
C2: (38.130,97.253,112.835)
C1': (39.181,95.244,113.754)
C3': (41.286,94.857,114.769)
O5': (40.134,95.357,117.412)
O4': (38.970,94.517,114.947)
C5': (40.239,94.003,116.929)
P: (39.742,95.654,118.924)
C4': (40.229,93.987,115.423)
C2': (40.670,95.155,113.407)
O2': (40.850,94.086,112.501)
N1: (38.640,96.596,113.942)
O4: (36.892,100.176,114.407)
O2: (38.163,96.783,111.711)
C6: (38.618,97.183,115.179)
C5: (38.081,98.383,115.395)
O3': (42.488,94.106,114.642)
Image (generated by PyMOL):