Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11475:11474
Extra
PDB:
ATOM 1 O3' U A1474 34.300 17.309 135.224 1.00 62.94 O
ATOM 2 P C A1475 33.117 16.268 135.295 1.00 56.49 P
ATOM 3 OP1 C A1475 33.620 15.112 136.054 1.00 56.62 O
ATOM 4 OP2 C A1475 32.645 16.070 133.922 1.00 55.85 O
ATOM 5 O5' C A1475 32.013 17.005 136.157 1.00 57.01 O
ATOM 6 C5' C A1475 32.069 16.904 137.570 1.00 57.63 C
ATOM 7 C4' C A1475 30.758 17.206 138.214 1.00 57.99 C
ATOM 8 O4' C A1475 30.460 18.615 138.073 1.00 58.21 O
ATOM 9 C3' C A1475 29.549 16.483 137.642 1.00 57.61 C
ATOM 10 O3' C A1475 29.394 15.170 138.178 1.00 57.62 O
ATOM 11 C2' C A1475 28.422 17.425 138.017 1.00 57.98 C
ATOM 12 O2' C A1475 28.092 17.282 139.403 1.00 58.60 O
ATOM 13 C1' C A1475 29.100 18.785 137.816 1.00 58.14 C
ATOM 14 N1 C A1475 28.969 19.288 136.441 1.00 57.63 N
ATOM 15 C2 C A1475 27.789 19.890 136.023 1.00 57.59 C
ATOM 16 O2 C A1475 26.810 19.986 136.772 1.00 57.97 O
ATOM 17 N3 C A1475 27.717 20.359 134.773 1.00 57.14 N
ATOM 18 C4 C A1475 28.731 20.265 133.961 1.00 56.74 C
ATOM 19 N4 C A1475 28.525 20.771 132.767 1.00 56.34 N
ATOM 20 C5 C A1475 29.951 19.662 134.340 1.00 56.76 C
ATOM 21 C6 C A1475 30.026 19.197 135.587 1.00 57.21 C
ATOM 22 P C A1476 28.714 13.984 137.304 1.00 53.69 P
ATOM 23 OP1 C A1476 28.593 12.781 138.208 1.00 53.90 O
ATOM 24 OP2 C A1476 29.513 13.853 136.022 1.00 53.08 O
ATOM 25 O5' C A1476 27.260 14.580 136.980 1.00 53.68 O
TER
ATOM 1 O3' A B1473 33.220 20.579 129.974 1.00 56.16 O
ATOM 2 P U B1474 32.169 19.653 130.756 1.00 61.49 P
ATOM 3 OP1 U B1474 32.094 18.381 130.006 1.00 60.93 O
ATOM 4 OP2 U B1474 30.931 20.453 130.943 1.00 61.75 O
ATOM 5 O5' U B1474 32.842 19.405 132.149 1.00 62.02 O
ATOM 6 C5' U B1474 33.946 18.552 132.284 1.00 61.90 C
ATOM 7 C4' U B1474 34.731 18.928 133.501 1.00 62.50 C
ATOM 8 O4' U B1474 34.903 20.357 133.527 1.00 62.81 O
ATOM 9 C3' U B1474 34.065 18.618 134.819 1.00 63.02 C
ATOM 10 O3' U B1474 34.300 17.309 135.224 1.00 62.94 O
ATOM 11 C2' U B1474 34.679 19.626 135.759 1.00 63.64 C
ATOM 12 O2' U B1474 35.929 19.163 136.247 1.00 63.78 O
ATOM 13 C1' U B1474 34.920 20.814 134.845 1.00 63.48 C
ATOM 14 N1 U B1474 33.886 21.793 135.005 1.00 63.76 N
ATOM 15 C2 U B1474 34.121 22.694 135.989 1.00 64.40 C
ATOM 16 O2 U B1474 35.167 22.689 136.641 1.00 64.70 O
ATOM 17 N3 U B1474 33.110 23.593 136.152 1.00 64.68 N
ATOM 18 C4 U B1474 31.936 23.646 135.452 1.00 64.38 C
ATOM 19 O4 U B1474 31.110 24.513 135.703 1.00 64.71 O
ATOM 20 C5 U B1474 31.785 22.650 134.465 1.00 63.72 C
ATOM 21 C6 U B1474 32.753 21.765 134.284 1.00 63.44 C
ATOM 22 P C B1475 33.117 16.268 135.295 1.00 56.49 P
ATOM 23 OP1 C B1475 33.620 15.112 136.054 1.00 56.62 O
ATOM 24 OP2 C B1475 32.645 16.070 133.922 1.00 55.85 O
ATOM 25 O5' C B1475 32.013 17.005 136.157 1.00 57.01 O
TER
ATOM 2 P C A1475 33.117 16.268 135.295 1.00 56.49 P
ATOM 3 OP1 C A1475 33.620 15.112 136.054 1.00 56.62 O
ATOM 4 OP2 C A1475 32.645 16.070 133.922 1.00 55.85 O
ATOM 5 O5' C A1475 32.013 17.005 136.157 1.00 57.01 O
ATOM 6 C5' C A1475 32.069 16.904 137.570 1.00 57.63 C
ATOM 7 C4' C A1475 30.758 17.206 138.214 1.00 57.99 C
ATOM 8 O4' C A1475 30.460 18.615 138.073 1.00 58.21 O
ATOM 9 C3' C A1475 29.549 16.483 137.642 1.00 57.61 C
ATOM 10 O3' C A1475 29.394 15.170 138.178 1.00 57.62 O
ATOM 11 C2' C A1475 28.422 17.425 138.017 1.00 57.98 C
ATOM 12 O2' C A1475 28.092 17.282 139.403 1.00 58.60 O
ATOM 13 C1' C A1475 29.100 18.785 137.816 1.00 58.14 C
ATOM 14 N1 C A1475 28.969 19.288 136.441 1.00 57.63 N
ATOM 15 C2 C A1475 27.789 19.890 136.023 1.00 57.59 C
ATOM 16 O2 C A1475 26.810 19.986 136.772 1.00 57.97 O
ATOM 17 N3 C A1475 27.717 20.359 134.773 1.00 57.14 N
ATOM 18 C4 C A1475 28.731 20.265 133.961 1.00 56.74 C
ATOM 19 N4 C A1475 28.525 20.771 132.767 1.00 56.34 N
ATOM 20 C5 C A1475 29.951 19.662 134.340 1.00 56.76 C
ATOM 21 C6 C A1475 30.026 19.197 135.587 1.00 57.21 C
ATOM 22 P C A1476 28.714 13.984 137.304 1.00 53.69 P
ATOM 23 OP1 C A1476 28.593 12.781 138.208 1.00 53.90 O
ATOM 24 OP2 C A1476 29.513 13.853 136.022 1.00 53.08 O
ATOM 25 O5' C A1476 27.260 14.580 136.980 1.00 53.68 O
TER
ATOM 1 O3' A B1473 33.220 20.579 129.974 1.00 56.16 O
ATOM 2 P U B1474 32.169 19.653 130.756 1.00 61.49 P
ATOM 3 OP1 U B1474 32.094 18.381 130.006 1.00 60.93 O
ATOM 4 OP2 U B1474 30.931 20.453 130.943 1.00 61.75 O
ATOM 5 O5' U B1474 32.842 19.405 132.149 1.00 62.02 O
ATOM 6 C5' U B1474 33.946 18.552 132.284 1.00 61.90 C
ATOM 7 C4' U B1474 34.731 18.928 133.501 1.00 62.50 C
ATOM 8 O4' U B1474 34.903 20.357 133.527 1.00 62.81 O
ATOM 9 C3' U B1474 34.065 18.618 134.819 1.00 63.02 C
ATOM 10 O3' U B1474 34.300 17.309 135.224 1.00 62.94 O
ATOM 11 C2' U B1474 34.679 19.626 135.759 1.00 63.64 C
ATOM 12 O2' U B1474 35.929 19.163 136.247 1.00 63.78 O
ATOM 13 C1' U B1474 34.920 20.814 134.845 1.00 63.48 C
ATOM 14 N1 U B1474 33.886 21.793 135.005 1.00 63.76 N
ATOM 15 C2 U B1474 34.121 22.694 135.989 1.00 64.40 C
ATOM 16 O2 U B1474 35.167 22.689 136.641 1.00 64.70 O
ATOM 17 N3 U B1474 33.110 23.593 136.152 1.00 64.68 N
ATOM 18 C4 U B1474 31.936 23.646 135.452 1.00 64.38 C
ATOM 19 O4 U B1474 31.110 24.513 135.703 1.00 64.71 O
ATOM 20 C5 U B1474 31.785 22.650 134.465 1.00 63.72 C
ATOM 21 C6 U B1474 32.753 21.765 134.284 1.00 63.44 C
ATOM 22 P C B1475 33.117 16.268 135.295 1.00 56.49 P
ATOM 23 OP1 C B1475 33.620 15.112 136.054 1.00 56.62 O
ATOM 24 OP2 C B1475 32.645 16.070 133.922 1.00 55.85 O
ATOM 25 O5' C B1475 32.013 17.005 136.157 1.00 57.01 O
TER
Atoms:
C2: (27.789,19.890,136.023)
OP1: (33.620,15.112,136.054)
OP2: (32.645,16.070,133.922)
C4: (28.731,20.265,133.961)
O5': (32.013,17.005,136.157)
C3': (29.549,16.483,137.642)
C1': (29.100,18.785,137.816)
O4': (30.460,18.615,138.073)
C5': (32.069,16.904,137.570)
P: (33.117,16.268,135.295)
O2: (26.810,19.986,136.772)
C4': (30.758,17.206,138.214)
C2': (28.422,17.425,138.017)
O2': (28.092,17.282,139.403)
N1: (28.969,19.288,136.441)
N3: (27.717,20.359,134.773)
N4: (28.525,20.771,132.767)
C6: (30.026,19.197,135.587)
C5: (29.951,19.662,134.340)
O3': (29.394,15.170,138.178)
OP1: (33.620,15.112,136.054)
OP2: (32.645,16.070,133.922)
C4: (28.731,20.265,133.961)
O5': (32.013,17.005,136.157)
C3': (29.549,16.483,137.642)
C1': (29.100,18.785,137.816)
O4': (30.460,18.615,138.073)
C5': (32.069,16.904,137.570)
P: (33.117,16.268,135.295)
O2: (26.810,19.986,136.772)
C4': (30.758,17.206,138.214)
C2': (28.422,17.425,138.017)
O2': (28.092,17.282,139.403)
N1: (28.969,19.288,136.441)
N3: (27.717,20.359,134.773)
N4: (28.525,20.771,132.767)
C6: (30.026,19.197,135.587)
C5: (29.951,19.662,134.340)
O3': (29.394,15.170,138.178)
C4: (31.936,23.646,135.452)
N3: (33.110,23.593,136.152)
OP1: (32.094,18.381,130.006)
OP2: (30.931,20.453,130.943)
C2: (34.121,22.694,135.989)
C1': (34.920,20.814,134.845)
C3': (34.065,18.618,134.819)
O5': (32.842,19.405,132.149)
O4': (34.903,20.357,133.527)
C5': (33.946,18.552,132.284)
P: (32.169,19.653,130.756)
C4': (34.731,18.928,133.501)
C2': (34.679,19.626,135.759)
O2': (35.929,19.163,136.247)
N1: (33.886,21.793,135.005)
O4: (31.110,24.513,135.703)
O2: (35.167,22.689,136.641)
C6: (32.753,21.765,134.284)
C5: (31.785,22.650,134.465)
O3': (34.300,17.309,135.224)
N3: (33.110,23.593,136.152)
OP1: (32.094,18.381,130.006)
OP2: (30.931,20.453,130.943)
C2: (34.121,22.694,135.989)
C1': (34.920,20.814,134.845)
C3': (34.065,18.618,134.819)
O5': (32.842,19.405,132.149)
O4': (34.903,20.357,133.527)
C5': (33.946,18.552,132.284)
P: (32.169,19.653,130.756)
C4': (34.731,18.928,133.501)
C2': (34.679,19.626,135.759)
O2': (35.929,19.163,136.247)
N1: (33.886,21.793,135.005)
O4: (31.110,24.513,135.703)
O2: (35.167,22.689,136.641)
C6: (32.753,21.765,134.284)
C5: (31.785,22.650,134.465)
O3': (34.300,17.309,135.224)
Image (generated by PyMOL):