Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.831 104.604 117.340 1.00 51.72 O
ATOM 2 P C A1088 44.868 104.871 118.925 1.00 54.71 P
ATOM 3 OP1 C A1088 44.194 106.182 119.189 1.00 54.73 O
ATOM 4 OP2 C A1088 46.277 104.667 119.369 1.00 54.64 O
ATOM 5 O5' C A1088 43.978 103.691 119.529 1.00 53.05 O
ATOM 6 C5' C A1088 42.643 103.939 120.024 1.00 52.52 C
ATOM 7 C4' C A1088 42.084 102.695 120.680 1.00 52.09 C
ATOM 8 O4' C A1088 41.901 101.664 119.675 1.00 51.49 O
ATOM 9 C3' C A1088 42.969 102.051 121.738 1.00 52.76 C
ATOM 10 O3' C A1088 42.795 102.671 123.017 1.00 51.58 O
ATOM 11 C2' C A1088 42.479 100.602 121.734 1.00 53.04 C
ATOM 12 O2' C A1088 41.310 100.410 122.511 1.00 54.03 O
ATOM 13 C1' C A1088 42.144 100.389 120.251 1.00 51.63 C
ATOM 14 N1 C A1088 43.187 99.693 119.461 1.00 51.77 N
ATOM 15 C2 C A1088 43.418 98.327 119.695 1.00 51.19 C
ATOM 16 O2 C A1088 42.735 97.732 120.541 1.00 54.90 O
ATOM 17 N3 C A1088 44.378 97.688 118.991 1.00 50.36 N
ATOM 18 C4 C A1088 45.089 98.347 118.078 1.00 48.09 C
ATOM 19 N4 C A1088 46.027 97.670 117.418 1.00 46.53 N
ATOM 20 C5 C A1088 44.870 99.729 117.804 1.00 49.47 C
ATOM 21 C6 C A1088 43.920 100.358 118.514 1.00 51.45 C
ATOM 22 P U A1089 43.974 103.580 123.646 1.00 54.77 P
ATOM 23 OP1 U A1089 43.520 104.020 124.997 1.00 54.30 O
ATOM 24 OP2 U A1089 44.362 104.606 122.631 1.00 53.53 O
ATOM 25 O5' U A1089 45.207 102.581 123.834 1.00 53.06 O
TER
ATOM 1 O3' C B1086 49.610 100.497 114.999 1.00 48.69 O
ATOM 2 P U B1087 48.369 100.178 115.979 1.00 49.73 P
ATOM 3 OP1 U B1087 48.920 100.135 117.360 1.00 50.03 O
ATOM 4 OP2 U B1087 47.625 99.006 115.453 1.00 46.68 O
ATOM 5 O5' U B1087 47.420 101.453 115.861 1.00 49.40 O
ATOM 6 C5' U B1087 47.853 102.736 116.328 1.00 48.87 C
ATOM 7 C4' U B1087 46.750 103.754 116.165 1.00 49.90 C
ATOM 8 O4' U B1087 46.471 103.938 114.745 1.00 50.44 O
ATOM 9 C3' U B1087 45.411 103.414 116.819 1.00 50.70 C
ATOM 10 O3' U B1087 44.831 104.604 117.340 1.00 51.72 O
ATOM 11 C2' U B1087 44.577 102.914 115.643 1.00 49.73 C
ATOM 12 O2' U B1087 43.190 103.103 115.830 1.00 50.11 O
ATOM 13 C1' U B1087 45.083 103.815 114.523 1.00 48.58 C
ATOM 14 N1 U B1087 44.855 103.319 113.156 1.00 47.61 N
ATOM 15 C2 U B1087 44.177 104.157 112.282 1.00 46.37 C
ATOM 16 O2 U B1087 43.775 105.261 112.595 1.00 47.47 O
ATOM 17 N3 U B1087 43.982 103.652 111.025 1.00 46.36 N
ATOM 18 C4 U B1087 44.375 102.424 110.556 1.00 47.81 C
ATOM 19 O4 U B1087 44.108 102.113 109.391 1.00 50.27 O
ATOM 20 C5 U B1087 45.071 101.610 111.513 1.00 47.65 C
ATOM 21 C6 U B1087 45.286 102.076 112.749 1.00 47.31 C
ATOM 22 P C B1088 44.868 104.871 118.925 1.00 54.71 P
ATOM 23 OP1 C B1088 44.194 106.182 119.189 1.00 54.73 O
ATOM 24 OP2 C B1088 46.277 104.667 119.369 1.00 54.64 O
ATOM 25 O5' C B1088 43.978 103.691 119.529 1.00 53.05 O
TER
ATOM 2 P C A1088 44.868 104.871 118.925 1.00 54.71 P
ATOM 3 OP1 C A1088 44.194 106.182 119.189 1.00 54.73 O
ATOM 4 OP2 C A1088 46.277 104.667 119.369 1.00 54.64 O
ATOM 5 O5' C A1088 43.978 103.691 119.529 1.00 53.05 O
ATOM 6 C5' C A1088 42.643 103.939 120.024 1.00 52.52 C
ATOM 7 C4' C A1088 42.084 102.695 120.680 1.00 52.09 C
ATOM 8 O4' C A1088 41.901 101.664 119.675 1.00 51.49 O
ATOM 9 C3' C A1088 42.969 102.051 121.738 1.00 52.76 C
ATOM 10 O3' C A1088 42.795 102.671 123.017 1.00 51.58 O
ATOM 11 C2' C A1088 42.479 100.602 121.734 1.00 53.04 C
ATOM 12 O2' C A1088 41.310 100.410 122.511 1.00 54.03 O
ATOM 13 C1' C A1088 42.144 100.389 120.251 1.00 51.63 C
ATOM 14 N1 C A1088 43.187 99.693 119.461 1.00 51.77 N
ATOM 15 C2 C A1088 43.418 98.327 119.695 1.00 51.19 C
ATOM 16 O2 C A1088 42.735 97.732 120.541 1.00 54.90 O
ATOM 17 N3 C A1088 44.378 97.688 118.991 1.00 50.36 N
ATOM 18 C4 C A1088 45.089 98.347 118.078 1.00 48.09 C
ATOM 19 N4 C A1088 46.027 97.670 117.418 1.00 46.53 N
ATOM 20 C5 C A1088 44.870 99.729 117.804 1.00 49.47 C
ATOM 21 C6 C A1088 43.920 100.358 118.514 1.00 51.45 C
ATOM 22 P U A1089 43.974 103.580 123.646 1.00 54.77 P
ATOM 23 OP1 U A1089 43.520 104.020 124.997 1.00 54.30 O
ATOM 24 OP2 U A1089 44.362 104.606 122.631 1.00 53.53 O
ATOM 25 O5' U A1089 45.207 102.581 123.834 1.00 53.06 O
TER
ATOM 1 O3' C B1086 49.610 100.497 114.999 1.00 48.69 O
ATOM 2 P U B1087 48.369 100.178 115.979 1.00 49.73 P
ATOM 3 OP1 U B1087 48.920 100.135 117.360 1.00 50.03 O
ATOM 4 OP2 U B1087 47.625 99.006 115.453 1.00 46.68 O
ATOM 5 O5' U B1087 47.420 101.453 115.861 1.00 49.40 O
ATOM 6 C5' U B1087 47.853 102.736 116.328 1.00 48.87 C
ATOM 7 C4' U B1087 46.750 103.754 116.165 1.00 49.90 C
ATOM 8 O4' U B1087 46.471 103.938 114.745 1.00 50.44 O
ATOM 9 C3' U B1087 45.411 103.414 116.819 1.00 50.70 C
ATOM 10 O3' U B1087 44.831 104.604 117.340 1.00 51.72 O
ATOM 11 C2' U B1087 44.577 102.914 115.643 1.00 49.73 C
ATOM 12 O2' U B1087 43.190 103.103 115.830 1.00 50.11 O
ATOM 13 C1' U B1087 45.083 103.815 114.523 1.00 48.58 C
ATOM 14 N1 U B1087 44.855 103.319 113.156 1.00 47.61 N
ATOM 15 C2 U B1087 44.177 104.157 112.282 1.00 46.37 C
ATOM 16 O2 U B1087 43.775 105.261 112.595 1.00 47.47 O
ATOM 17 N3 U B1087 43.982 103.652 111.025 1.00 46.36 N
ATOM 18 C4 U B1087 44.375 102.424 110.556 1.00 47.81 C
ATOM 19 O4 U B1087 44.108 102.113 109.391 1.00 50.27 O
ATOM 20 C5 U B1087 45.071 101.610 111.513 1.00 47.65 C
ATOM 21 C6 U B1087 45.286 102.076 112.749 1.00 47.31 C
ATOM 22 P C B1088 44.868 104.871 118.925 1.00 54.71 P
ATOM 23 OP1 C B1088 44.194 106.182 119.189 1.00 54.73 O
ATOM 24 OP2 C B1088 46.277 104.667 119.369 1.00 54.64 O
ATOM 25 O5' C B1088 43.978 103.691 119.529 1.00 53.05 O
TER
Atoms:
C2: (43.418,98.327,119.695)
OP1: (44.194,106.182,119.189)
OP2: (46.277,104.667,119.369)
C4: (45.089,98.347,118.078)
O5': (43.978,103.691,119.529)
C3': (42.969,102.051,121.738)
C1': (42.144,100.389,120.251)
O4': (41.901,101.664,119.675)
C5': (42.643,103.939,120.024)
P: (44.868,104.871,118.925)
O2: (42.735,97.732,120.541)
C4': (42.084,102.695,120.680)
C2': (42.479,100.602,121.734)
O2': (41.310,100.410,122.511)
N1: (43.187,99.693,119.461)
N3: (44.378,97.688,118.991)
N4: (46.027,97.670,117.418)
C6: (43.920,100.358,118.514)
C5: (44.870,99.729,117.804)
O3': (42.795,102.671,123.017)
OP1: (44.194,106.182,119.189)
OP2: (46.277,104.667,119.369)
C4: (45.089,98.347,118.078)
O5': (43.978,103.691,119.529)
C3': (42.969,102.051,121.738)
C1': (42.144,100.389,120.251)
O4': (41.901,101.664,119.675)
C5': (42.643,103.939,120.024)
P: (44.868,104.871,118.925)
O2: (42.735,97.732,120.541)
C4': (42.084,102.695,120.680)
C2': (42.479,100.602,121.734)
O2': (41.310,100.410,122.511)
N1: (43.187,99.693,119.461)
N3: (44.378,97.688,118.991)
N4: (46.027,97.670,117.418)
C6: (43.920,100.358,118.514)
C5: (44.870,99.729,117.804)
O3': (42.795,102.671,123.017)
C4: (44.375,102.424,110.556)
N3: (43.982,103.652,111.025)
OP1: (48.920,100.135,117.360)
OP2: (47.625,99.006,115.453)
C2: (44.177,104.157,112.282)
C1': (45.083,103.815,114.523)
C3': (45.411,103.414,116.819)
O5': (47.420,101.453,115.861)
O4': (46.471,103.938,114.745)
C5': (47.853,102.736,116.328)
P: (48.369,100.178,115.979)
C4': (46.750,103.754,116.165)
C2': (44.577,102.914,115.643)
O2': (43.190,103.103,115.830)
N1: (44.855,103.319,113.156)
O4: (44.108,102.113,109.391)
O2: (43.775,105.261,112.595)
C6: (45.286,102.076,112.749)
C5: (45.071,101.610,111.513)
O3': (44.831,104.604,117.340)
N3: (43.982,103.652,111.025)
OP1: (48.920,100.135,117.360)
OP2: (47.625,99.006,115.453)
C2: (44.177,104.157,112.282)
C1': (45.083,103.815,114.523)
C3': (45.411,103.414,116.819)
O5': (47.420,101.453,115.861)
O4': (46.471,103.938,114.745)
C5': (47.853,102.736,116.328)
P: (48.369,100.178,115.979)
C4': (46.750,103.754,116.165)
C2': (44.577,102.914,115.643)
O2': (43.190,103.103,115.830)
N1: (44.855,103.319,113.156)
O4: (44.108,102.113,109.391)
O2: (43.775,105.261,112.595)
C6: (45.286,102.076,112.749)
C5: (45.071,101.610,111.513)
O3': (44.831,104.604,117.340)
Image (generated by PyMOL):