Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.461 122.043 104.553 1.00 35.83 O
ATOM 2 P C A2023 34.563 121.113 105.495 1.00 37.89 P
ATOM 3 OP1 C A2023 33.208 121.092 104.900 1.00 38.01 O
ATOM 4 OP2 C A2023 34.738 121.561 106.891 1.00 38.46 O
ATOM 5 O5' C A2023 35.228 119.671 105.374 1.00 35.36 O
ATOM 6 C5' C A2023 34.693 118.680 104.489 1.00 34.32 C
ATOM 7 C4' C A2023 35.062 117.304 104.976 1.00 35.27 C
ATOM 8 O4' C A2023 36.495 117.126 104.885 1.00 35.54 O
ATOM 9 C3' C A2023 34.715 117.049 106.429 1.00 35.07 C
ATOM 10 O3' C A2023 33.368 116.595 106.529 1.00 34.72 O
ATOM 11 C2' C A2023 35.746 116.004 106.837 1.00 35.57 C
ATOM 12 O2' C A2023 35.415 114.710 106.396 1.00 35.93 O
ATOM 13 C1' C A2023 36.968 116.457 106.037 1.00 36.25 C
ATOM 14 N1 C A2023 37.898 117.363 106.745 1.00 37.09 N
ATOM 15 C2 C A2023 38.746 116.839 107.735 1.00 35.86 C
ATOM 16 O2 C A2023 38.647 115.648 108.045 1.00 34.64 O
ATOM 17 N3 C A2023 39.643 117.649 108.328 1.00 35.61 N
ATOM 18 C4 C A2023 39.710 118.934 107.985 1.00 36.47 C
ATOM 19 N4 C A2023 40.633 119.686 108.575 1.00 36.70 N
ATOM 20 C5 C A2023 38.838 119.504 107.014 1.00 36.65 C
ATOM 21 C6 C A2023 37.955 118.693 106.426 1.00 35.88 C
ATOM 22 P U A2024 32.423 117.128 107.717 1.00 35.82 P
ATOM 23 OP1 U A2024 31.094 116.531 107.474 1.00 35.76 O
ATOM 24 OP2 U A2024 32.544 118.603 107.837 1.00 35.11 O
ATOM 25 O5' U A2024 33.040 116.433 109.010 1.00 33.74 O
TER
ATOM 1 O3' G B2021 40.583 124.749 107.691 1.00 35.40 O
ATOM 2 P U B2022 40.416 123.236 107.186 1.00 35.57 P
ATOM 3 OP1 U B2022 39.966 122.481 108.370 1.00 35.64 O
ATOM 4 OP2 U B2022 41.626 122.798 106.459 1.00 35.81 O
ATOM 5 O5' U B2022 39.221 123.302 106.141 1.00 33.61 O
ATOM 6 C5' U B2022 37.977 123.897 106.498 1.00 33.67 C
ATOM 7 C4' U B2022 36.972 123.701 105.396 1.00 36.28 C
ATOM 8 O4' U B2022 37.334 124.513 104.241 1.00 38.20 O
ATOM 9 C3' U B2022 36.821 122.271 104.887 1.00 36.58 C
ATOM 10 O3' U B2022 35.461 122.043 104.553 1.00 35.83 O
ATOM 11 C2' U B2022 37.679 122.274 103.624 1.00 37.57 C
ATOM 12 O2' U B2022 37.298 121.298 102.670 1.00 36.00 O
ATOM 13 C1' U B2022 37.429 123.686 103.096 1.00 37.60 C
ATOM 14 N1 U B2022 38.503 124.191 102.228 1.00 37.56 N
ATOM 15 C2 U B2022 38.189 124.481 100.910 1.00 36.49 C
ATOM 16 O2 U B2022 37.071 124.397 100.457 1.00 35.54 O
ATOM 17 N3 U B2022 39.244 124.883 100.140 1.00 37.90 N
ATOM 18 C4 U B2022 40.552 125.035 100.539 1.00 38.27 C
ATOM 19 O4 U B2022 41.406 125.291 99.695 1.00 41.49 O
ATOM 20 C5 U B2022 40.795 124.759 101.922 1.00 37.11 C
ATOM 21 C6 U B2022 39.789 124.356 102.700 1.00 38.27 C
ATOM 22 P C B2023 34.563 121.113 105.495 1.00 37.89 P
ATOM 23 OP1 C B2023 33.208 121.092 104.900 1.00 38.01 O
ATOM 24 OP2 C B2023 34.738 121.561 106.891 1.00 38.46 O
ATOM 25 O5' C B2023 35.228 119.671 105.374 1.00 35.36 O
TER
ATOM 2 P C A2023 34.563 121.113 105.495 1.00 37.89 P
ATOM 3 OP1 C A2023 33.208 121.092 104.900 1.00 38.01 O
ATOM 4 OP2 C A2023 34.738 121.561 106.891 1.00 38.46 O
ATOM 5 O5' C A2023 35.228 119.671 105.374 1.00 35.36 O
ATOM 6 C5' C A2023 34.693 118.680 104.489 1.00 34.32 C
ATOM 7 C4' C A2023 35.062 117.304 104.976 1.00 35.27 C
ATOM 8 O4' C A2023 36.495 117.126 104.885 1.00 35.54 O
ATOM 9 C3' C A2023 34.715 117.049 106.429 1.00 35.07 C
ATOM 10 O3' C A2023 33.368 116.595 106.529 1.00 34.72 O
ATOM 11 C2' C A2023 35.746 116.004 106.837 1.00 35.57 C
ATOM 12 O2' C A2023 35.415 114.710 106.396 1.00 35.93 O
ATOM 13 C1' C A2023 36.968 116.457 106.037 1.00 36.25 C
ATOM 14 N1 C A2023 37.898 117.363 106.745 1.00 37.09 N
ATOM 15 C2 C A2023 38.746 116.839 107.735 1.00 35.86 C
ATOM 16 O2 C A2023 38.647 115.648 108.045 1.00 34.64 O
ATOM 17 N3 C A2023 39.643 117.649 108.328 1.00 35.61 N
ATOM 18 C4 C A2023 39.710 118.934 107.985 1.00 36.47 C
ATOM 19 N4 C A2023 40.633 119.686 108.575 1.00 36.70 N
ATOM 20 C5 C A2023 38.838 119.504 107.014 1.00 36.65 C
ATOM 21 C6 C A2023 37.955 118.693 106.426 1.00 35.88 C
ATOM 22 P U A2024 32.423 117.128 107.717 1.00 35.82 P
ATOM 23 OP1 U A2024 31.094 116.531 107.474 1.00 35.76 O
ATOM 24 OP2 U A2024 32.544 118.603 107.837 1.00 35.11 O
ATOM 25 O5' U A2024 33.040 116.433 109.010 1.00 33.74 O
TER
ATOM 1 O3' G B2021 40.583 124.749 107.691 1.00 35.40 O
ATOM 2 P U B2022 40.416 123.236 107.186 1.00 35.57 P
ATOM 3 OP1 U B2022 39.966 122.481 108.370 1.00 35.64 O
ATOM 4 OP2 U B2022 41.626 122.798 106.459 1.00 35.81 O
ATOM 5 O5' U B2022 39.221 123.302 106.141 1.00 33.61 O
ATOM 6 C5' U B2022 37.977 123.897 106.498 1.00 33.67 C
ATOM 7 C4' U B2022 36.972 123.701 105.396 1.00 36.28 C
ATOM 8 O4' U B2022 37.334 124.513 104.241 1.00 38.20 O
ATOM 9 C3' U B2022 36.821 122.271 104.887 1.00 36.58 C
ATOM 10 O3' U B2022 35.461 122.043 104.553 1.00 35.83 O
ATOM 11 C2' U B2022 37.679 122.274 103.624 1.00 37.57 C
ATOM 12 O2' U B2022 37.298 121.298 102.670 1.00 36.00 O
ATOM 13 C1' U B2022 37.429 123.686 103.096 1.00 37.60 C
ATOM 14 N1 U B2022 38.503 124.191 102.228 1.00 37.56 N
ATOM 15 C2 U B2022 38.189 124.481 100.910 1.00 36.49 C
ATOM 16 O2 U B2022 37.071 124.397 100.457 1.00 35.54 O
ATOM 17 N3 U B2022 39.244 124.883 100.140 1.00 37.90 N
ATOM 18 C4 U B2022 40.552 125.035 100.539 1.00 38.27 C
ATOM 19 O4 U B2022 41.406 125.291 99.695 1.00 41.49 O
ATOM 20 C5 U B2022 40.795 124.759 101.922 1.00 37.11 C
ATOM 21 C6 U B2022 39.789 124.356 102.700 1.00 38.27 C
ATOM 22 P C B2023 34.563 121.113 105.495 1.00 37.89 P
ATOM 23 OP1 C B2023 33.208 121.092 104.900 1.00 38.01 O
ATOM 24 OP2 C B2023 34.738 121.561 106.891 1.00 38.46 O
ATOM 25 O5' C B2023 35.228 119.671 105.374 1.00 35.36 O
TER
Atoms:
C2: (38.746,116.839,107.735)
OP1: (33.208,121.092,104.900)
OP2: (34.738,121.561,106.891)
C4: (39.710,118.934,107.985)
O5': (35.228,119.671,105.374)
C3': (34.715,117.049,106.429)
C1': (36.968,116.457,106.037)
O4': (36.495,117.126,104.885)
C5': (34.693,118.680,104.489)
P: (34.563,121.113,105.495)
O2: (38.647,115.648,108.045)
C4': (35.062,117.304,104.976)
C2': (35.746,116.004,106.837)
O2': (35.415,114.710,106.396)
N1: (37.898,117.363,106.745)
N3: (39.643,117.649,108.328)
N4: (40.633,119.686,108.575)
C6: (37.955,118.693,106.426)
C5: (38.838,119.504,107.014)
O3': (33.368,116.595,106.529)
OP1: (33.208,121.092,104.900)
OP2: (34.738,121.561,106.891)
C4: (39.710,118.934,107.985)
O5': (35.228,119.671,105.374)
C3': (34.715,117.049,106.429)
C1': (36.968,116.457,106.037)
O4': (36.495,117.126,104.885)
C5': (34.693,118.680,104.489)
P: (34.563,121.113,105.495)
O2: (38.647,115.648,108.045)
C4': (35.062,117.304,104.976)
C2': (35.746,116.004,106.837)
O2': (35.415,114.710,106.396)
N1: (37.898,117.363,106.745)
N3: (39.643,117.649,108.328)
N4: (40.633,119.686,108.575)
C6: (37.955,118.693,106.426)
C5: (38.838,119.504,107.014)
O3': (33.368,116.595,106.529)
C4: (40.552,125.035,100.539)
N3: (39.244,124.883,100.140)
OP1: (39.966,122.481,108.370)
OP2: (41.626,122.798,106.459)
C2: (38.189,124.481,100.910)
C1': (37.429,123.686,103.096)
C3': (36.821,122.271,104.887)
O5': (39.221,123.302,106.141)
O4': (37.334,124.513,104.241)
C5': (37.977,123.897,106.498)
P: (40.416,123.236,107.186)
C4': (36.972,123.701,105.396)
C2': (37.679,122.274,103.624)
O2': (37.298,121.298,102.670)
N1: (38.503,124.191,102.228)
O4: (41.406,125.291,99.695)
O2: (37.071,124.397,100.457)
C6: (39.789,124.356,102.700)
C5: (40.795,124.759,101.922)
O3': (35.461,122.043,104.553)
N3: (39.244,124.883,100.140)
OP1: (39.966,122.481,108.370)
OP2: (41.626,122.798,106.459)
C2: (38.189,124.481,100.910)
C1': (37.429,123.686,103.096)
C3': (36.821,122.271,104.887)
O5': (39.221,123.302,106.141)
O4': (37.334,124.513,104.241)
C5': (37.977,123.897,106.498)
P: (40.416,123.236,107.186)
C4': (36.972,123.701,105.396)
C2': (37.679,122.274,103.624)
O2': (37.298,121.298,102.670)
N1: (38.503,124.191,102.228)
O4: (41.406,125.291,99.695)
O2: (37.071,124.397,100.457)
C6: (39.789,124.356,102.700)
C5: (40.795,124.759,101.922)
O3': (35.461,122.043,104.553)
Image (generated by PyMOL):