Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2B57:A38:A9
Extra
PDB:
ATOM 1 O3' C A 37 -21.782 -17.729 10.574 1.00 38.34 O
ATOM 2 P C A 38 -22.716 -18.873 11.211 1.00 39.44 P
ATOM 3 OP1 C A 38 -21.851 -19.946 11.743 1.00 40.73 O
ATOM 4 OP2 C A 38 -23.784 -19.210 10.243 1.00 39.33 O
ATOM 5 O5' C A 38 -23.401 -18.120 12.440 1.00 40.20 O
ATOM 6 C5' C A 38 -23.009 -18.423 13.765 1.00 36.87 C
ATOM 7 C4' C A 38 -22.731 -17.165 14.560 1.00 35.57 C
ATOM 8 O4' C A 38 -21.903 -16.263 13.781 1.00 32.13 O
ATOM 9 C3' C A 38 -23.872 -16.236 14.948 1.00 36.63 C
ATOM 10 O3' C A 38 -24.698 -16.730 16.001 1.00 38.56 O
ATOM 11 C2' C A 38 -23.072 -15.036 15.427 1.00 34.55 C
ATOM 12 O2' C A 38 -22.417 -15.304 16.648 1.00 33.50 O
ATOM 13 C1' C A 38 -22.009 -14.954 14.337 1.00 32.42 C
ATOM 14 N1 C A 38 -22.382 -13.969 13.300 1.00 26.71 N
ATOM 15 C2 C A 38 -22.377 -12.621 13.662 1.00 27.96 C
ATOM 16 O2 C A 38 -22.071 -12.321 14.833 1.00 26.18 O
ATOM 17 N3 C A 38 -22.698 -11.682 12.742 1.00 26.07 N
ATOM 18 C4 C A 38 -23.015 -12.051 11.496 1.00 28.35 C
ATOM 19 N4 C A 38 -23.309 -11.094 10.617 1.00 23.40 N
ATOM 20 C5 C A 38 -23.038 -13.422 11.100 1.00 27.40 C
ATOM 21 C6 C A 38 -22.718 -14.341 12.030 1.00 28.04 C
ATOM 22 P G A 39 -26.196 -16.157 16.177 1.00 36.09 P
ATOM 23 OP1 G A 39 -26.906 -17.089 17.089 1.00 40.01 O
ATOM 24 OP2 G A 39 -26.773 -15.863 14.844 1.00 38.73 O
ATOM 25 O5' G A 39 -26.000 -14.787 16.953 1.00 36.12 O
TER
ATOM 1 O3' A B 8 -21.449 -13.029 7.432 1.00 31.79 O
ATOM 2 P U B 9 -23.012 -12.787 7.181 1.00 31.46 P
ATOM 3 OP1 U B 9 -23.316 -11.414 7.661 1.00 29.70 O
ATOM 4 OP2 U B 9 -23.747 -13.938 7.743 1.00 32.46 O
ATOM 5 O5' U B 9 -23.165 -12.876 5.595 1.00 32.36 O
ATOM 6 C5' U B 9 -22.887 -11.755 4.763 1.00 33.50 C
ATOM 7 C4' U B 9 -22.222 -12.208 3.483 1.00 35.60 C
ATOM 8 O4' U B 9 -20.892 -12.713 3.775 1.00 34.77 O
ATOM 9 C3' U B 9 -22.890 -13.366 2.762 1.00 36.78 C
ATOM 10 O3' U B 9 -23.976 -12.924 1.962 1.00 40.93 O
ATOM 11 C2' U B 9 -21.752 -13.902 1.907 1.00 36.95 C
ATOM 12 O2' U B 9 -21.528 -13.139 0.736 1.00 39.63 O
ATOM 13 C1' U B 9 -20.564 -13.741 2.855 1.00 34.28 C
ATOM 14 N1 U B 9 -20.258 -14.966 3.606 1.00 32.59 N
ATOM 15 C2 U B 9 -19.808 -16.053 2.888 1.00 31.98 C
ATOM 16 O2 U B 9 -19.664 -16.030 1.683 1.00 34.36 O
ATOM 17 N3 U B 9 -19.531 -17.166 3.632 1.00 31.58 N
ATOM 18 C4 U B 9 -19.652 -17.301 4.999 1.00 31.62 C
ATOM 19 O4 U B 9 -19.308 -18.357 5.534 1.00 34.27 O
ATOM 20 C5 U B 9 -20.128 -16.137 5.673 1.00 29.89 C
ATOM 21 C6 U B 9 -20.409 -15.034 4.972 1.00 32.30 C
ATOM 22 P C B 10 -25.297 -13.833 1.841 1.00 43.35 P
ATOM 23 OP1 C B 10 -26.364 -12.979 1.263 1.00 44.47 O
ATOM 24 OP2 C B 10 -25.515 -14.487 3.155 1.00 44.96 O
ATOM 25 O5' C B 10 -24.902 -14.973 0.799 1.00 42.38 O
TER
ATOM 2 P C A 38 -22.716 -18.873 11.211 1.00 39.44 P
ATOM 3 OP1 C A 38 -21.851 -19.946 11.743 1.00 40.73 O
ATOM 4 OP2 C A 38 -23.784 -19.210 10.243 1.00 39.33 O
ATOM 5 O5' C A 38 -23.401 -18.120 12.440 1.00 40.20 O
ATOM 6 C5' C A 38 -23.009 -18.423 13.765 1.00 36.87 C
ATOM 7 C4' C A 38 -22.731 -17.165 14.560 1.00 35.57 C
ATOM 8 O4' C A 38 -21.903 -16.263 13.781 1.00 32.13 O
ATOM 9 C3' C A 38 -23.872 -16.236 14.948 1.00 36.63 C
ATOM 10 O3' C A 38 -24.698 -16.730 16.001 1.00 38.56 O
ATOM 11 C2' C A 38 -23.072 -15.036 15.427 1.00 34.55 C
ATOM 12 O2' C A 38 -22.417 -15.304 16.648 1.00 33.50 O
ATOM 13 C1' C A 38 -22.009 -14.954 14.337 1.00 32.42 C
ATOM 14 N1 C A 38 -22.382 -13.969 13.300 1.00 26.71 N
ATOM 15 C2 C A 38 -22.377 -12.621 13.662 1.00 27.96 C
ATOM 16 O2 C A 38 -22.071 -12.321 14.833 1.00 26.18 O
ATOM 17 N3 C A 38 -22.698 -11.682 12.742 1.00 26.07 N
ATOM 18 C4 C A 38 -23.015 -12.051 11.496 1.00 28.35 C
ATOM 19 N4 C A 38 -23.309 -11.094 10.617 1.00 23.40 N
ATOM 20 C5 C A 38 -23.038 -13.422 11.100 1.00 27.40 C
ATOM 21 C6 C A 38 -22.718 -14.341 12.030 1.00 28.04 C
ATOM 22 P G A 39 -26.196 -16.157 16.177 1.00 36.09 P
ATOM 23 OP1 G A 39 -26.906 -17.089 17.089 1.00 40.01 O
ATOM 24 OP2 G A 39 -26.773 -15.863 14.844 1.00 38.73 O
ATOM 25 O5' G A 39 -26.000 -14.787 16.953 1.00 36.12 O
TER
ATOM 1 O3' A B 8 -21.449 -13.029 7.432 1.00 31.79 O
ATOM 2 P U B 9 -23.012 -12.787 7.181 1.00 31.46 P
ATOM 3 OP1 U B 9 -23.316 -11.414 7.661 1.00 29.70 O
ATOM 4 OP2 U B 9 -23.747 -13.938 7.743 1.00 32.46 O
ATOM 5 O5' U B 9 -23.165 -12.876 5.595 1.00 32.36 O
ATOM 6 C5' U B 9 -22.887 -11.755 4.763 1.00 33.50 C
ATOM 7 C4' U B 9 -22.222 -12.208 3.483 1.00 35.60 C
ATOM 8 O4' U B 9 -20.892 -12.713 3.775 1.00 34.77 O
ATOM 9 C3' U B 9 -22.890 -13.366 2.762 1.00 36.78 C
ATOM 10 O3' U B 9 -23.976 -12.924 1.962 1.00 40.93 O
ATOM 11 C2' U B 9 -21.752 -13.902 1.907 1.00 36.95 C
ATOM 12 O2' U B 9 -21.528 -13.139 0.736 1.00 39.63 O
ATOM 13 C1' U B 9 -20.564 -13.741 2.855 1.00 34.28 C
ATOM 14 N1 U B 9 -20.258 -14.966 3.606 1.00 32.59 N
ATOM 15 C2 U B 9 -19.808 -16.053 2.888 1.00 31.98 C
ATOM 16 O2 U B 9 -19.664 -16.030 1.683 1.00 34.36 O
ATOM 17 N3 U B 9 -19.531 -17.166 3.632 1.00 31.58 N
ATOM 18 C4 U B 9 -19.652 -17.301 4.999 1.00 31.62 C
ATOM 19 O4 U B 9 -19.308 -18.357 5.534 1.00 34.27 O
ATOM 20 C5 U B 9 -20.128 -16.137 5.673 1.00 29.89 C
ATOM 21 C6 U B 9 -20.409 -15.034 4.972 1.00 32.30 C
ATOM 22 P C B 10 -25.297 -13.833 1.841 1.00 43.35 P
ATOM 23 OP1 C B 10 -26.364 -12.979 1.263 1.00 44.47 O
ATOM 24 OP2 C B 10 -25.515 -14.487 3.155 1.00 44.96 O
ATOM 25 O5' C B 10 -24.902 -14.973 0.799 1.00 42.38 O
TER
Atoms:
C2: (-22.377,-12.621,13.662)
OP1: (-21.851,-19.946,11.743)
OP2: (-23.784,-19.210,10.243)
C4: (-23.015,-12.051,11.496)
O5': (-23.401,-18.120,12.440)
C3': (-23.872,-16.236,14.948)
C1': (-22.009,-14.954,14.337)
O4': (-21.903,-16.263,13.781)
C5': (-23.009,-18.423,13.765)
P: (-22.716,-18.873,11.211)
O2: (-22.071,-12.321,14.833)
C4': (-22.731,-17.165,14.560)
C2': (-23.072,-15.036,15.427)
O2': (-22.417,-15.304,16.648)
N1: (-22.382,-13.969,13.300)
N3: (-22.698,-11.682,12.742)
N4: (-23.309,-11.094,10.617)
C6: (-22.718,-14.341,12.030)
C5: (-23.038,-13.422,11.100)
O3': (-24.698,-16.730,16.001)
OP1: (-21.851,-19.946,11.743)
OP2: (-23.784,-19.210,10.243)
C4: (-23.015,-12.051,11.496)
O5': (-23.401,-18.120,12.440)
C3': (-23.872,-16.236,14.948)
C1': (-22.009,-14.954,14.337)
O4': (-21.903,-16.263,13.781)
C5': (-23.009,-18.423,13.765)
P: (-22.716,-18.873,11.211)
O2: (-22.071,-12.321,14.833)
C4': (-22.731,-17.165,14.560)
C2': (-23.072,-15.036,15.427)
O2': (-22.417,-15.304,16.648)
N1: (-22.382,-13.969,13.300)
N3: (-22.698,-11.682,12.742)
N4: (-23.309,-11.094,10.617)
C6: (-22.718,-14.341,12.030)
C5: (-23.038,-13.422,11.100)
O3': (-24.698,-16.730,16.001)
C4: (-19.652,-17.301,4.999)
N3: (-19.531,-17.166,3.632)
OP1: (-23.316,-11.414,7.661)
OP2: (-23.747,-13.938,7.743)
C2: (-19.808,-16.053,2.888)
C1': (-20.564,-13.741,2.855)
C3': (-22.890,-13.366,2.762)
O5': (-23.165,-12.876,5.595)
O4': (-20.892,-12.713,3.775)
C5': (-22.887,-11.755,4.763)
P: (-23.012,-12.787,7.181)
C4': (-22.222,-12.208,3.483)
C2': (-21.752,-13.902,1.907)
O2': (-21.528,-13.139,0.736)
N1: (-20.258,-14.966,3.606)
O4: (-19.308,-18.357,5.534)
O2: (-19.664,-16.030,1.683)
C6: (-20.409,-15.034,4.972)
C5: (-20.128,-16.137,5.673)
O3': (-23.976,-12.924,1.962)
N3: (-19.531,-17.166,3.632)
OP1: (-23.316,-11.414,7.661)
OP2: (-23.747,-13.938,7.743)
C2: (-19.808,-16.053,2.888)
C1': (-20.564,-13.741,2.855)
C3': (-22.890,-13.366,2.762)
O5': (-23.165,-12.876,5.595)
O4': (-20.892,-12.713,3.775)
C5': (-22.887,-11.755,4.763)
P: (-23.012,-12.787,7.181)
C4': (-22.222,-12.208,3.483)
C2': (-21.752,-13.902,1.907)
O2': (-21.528,-13.139,0.736)
N1: (-20.258,-14.966,3.606)
O4: (-19.308,-18.357,5.534)
O2: (-19.664,-16.030,1.683)
C6: (-20.409,-15.034,4.972)
C5: (-20.128,-16.137,5.673)
O3': (-23.976,-12.924,1.962)
Image (generated by PyMOL):