Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1088:A1087
Extra
PDB:
ATOM 1 O3' U A1087 44.875 105.416 117.067 1.00 36.50 O
ATOM 2 P C A1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 3 OP1 C A1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 4 OP2 C A1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 5 O5' C A1088 43.947 104.630 119.256 1.00 39.39 O
ATOM 6 C5' C A1088 42.691 104.996 119.863 1.00 39.04 C
ATOM 7 C4' C A1088 42.047 103.805 120.525 1.00 40.37 C
ATOM 8 O4' C A1088 41.721 102.805 119.533 1.00 40.36 O
ATOM 9 C3' C A1088 42.892 103.067 121.542 1.00 41.43 C
ATOM 10 O3' C A1088 42.809 103.730 122.795 1.00 44.55 O
ATOM 11 C2' C A1088 42.208 101.705 121.583 1.00 41.09 C
ATOM 12 O2' C A1088 41.015 101.713 122.338 1.00 42.46 O
ATOM 13 C1' C A1088 41.828 101.515 120.111 1.00 39.82 C
ATOM 14 N1 C A1088 42.828 100.740 119.350 1.00 39.70 N
ATOM 15 C2 C A1088 42.920 99.363 119.565 1.00 40.13 C
ATOM 16 O2 C A1088 42.156 98.830 120.380 1.00 42.92 O
ATOM 17 N3 C A1088 43.838 98.650 118.880 1.00 39.37 N
ATOM 18 C4 C A1088 44.644 99.256 118.008 1.00 38.90 C
ATOM 19 N4 C A1088 45.541 98.502 117.369 1.00 38.65 N
ATOM 20 C5 C A1088 44.569 100.654 117.760 1.00 39.65 C
ATOM 21 C6 C A1088 43.657 101.352 118.450 1.00 39.86 C
ATOM 22 P U A1089 44.078 104.535 123.357 1.00 48.40 P
ATOM 23 OP1 U A1089 43.756 104.895 124.756 1.00 46.02 O
ATOM 24 OP2 U A1089 44.486 105.600 122.396 1.00 47.48 O
ATOM 25 O5' U A1089 45.228 103.442 123.405 1.00 51.20 O
TER
ATOM 1 O3' C B1086 49.481 101.219 114.871 1.00 35.87 O
ATOM 2 P U B1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 3 OP1 U B1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 4 OP2 U B1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 5 O5' U B1087 47.357 102.187 115.833 1.00 33.84 O
ATOM 6 C5' U B1087 47.856 103.483 116.171 1.00 32.79 C
ATOM 7 C4' U B1087 46.787 104.521 115.973 1.00 32.82 C
ATOM 8 O4' U B1087 46.522 104.693 114.556 1.00 33.65 O
ATOM 9 C3' U B1087 45.443 104.203 116.616 1.00 33.54 C
ATOM 10 O3' U B1087 44.875 105.416 117.067 1.00 36.50 O
ATOM 11 C2' U B1087 44.614 103.697 115.447 1.00 33.26 C
ATOM 12 O2' U B1087 43.234 103.917 115.649 1.00 34.36 O
ATOM 13 C1' U B1087 45.134 104.597 114.339 1.00 33.96 C
ATOM 14 N1 U B1087 44.881 104.138 112.969 1.00 34.69 N
ATOM 15 C2 U B1087 44.279 105.039 112.114 1.00 35.74 C
ATOM 16 O2 U B1087 43.995 106.174 112.442 1.00 37.18 O
ATOM 17 N3 U B1087 44.026 104.564 110.855 1.00 35.77 N
ATOM 18 C4 U B1087 44.312 103.314 110.370 1.00 35.86 C
ATOM 19 O4 U B1087 44.069 103.056 109.197 1.00 36.38 O
ATOM 20 C5 U B1087 44.946 102.441 111.304 1.00 36.33 C
ATOM 21 C6 U B1087 45.208 102.873 112.542 1.00 36.26 C
ATOM 22 P C B1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 23 OP1 C B1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 24 OP2 C B1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 25 O5' C B1088 43.947 104.630 119.256 1.00 39.39 O
TER
ATOM 2 P C A1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 3 OP1 C A1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 4 OP2 C A1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 5 O5' C A1088 43.947 104.630 119.256 1.00 39.39 O
ATOM 6 C5' C A1088 42.691 104.996 119.863 1.00 39.04 C
ATOM 7 C4' C A1088 42.047 103.805 120.525 1.00 40.37 C
ATOM 8 O4' C A1088 41.721 102.805 119.533 1.00 40.36 O
ATOM 9 C3' C A1088 42.892 103.067 121.542 1.00 41.43 C
ATOM 10 O3' C A1088 42.809 103.730 122.795 1.00 44.55 O
ATOM 11 C2' C A1088 42.208 101.705 121.583 1.00 41.09 C
ATOM 12 O2' C A1088 41.015 101.713 122.338 1.00 42.46 O
ATOM 13 C1' C A1088 41.828 101.515 120.111 1.00 39.82 C
ATOM 14 N1 C A1088 42.828 100.740 119.350 1.00 39.70 N
ATOM 15 C2 C A1088 42.920 99.363 119.565 1.00 40.13 C
ATOM 16 O2 C A1088 42.156 98.830 120.380 1.00 42.92 O
ATOM 17 N3 C A1088 43.838 98.650 118.880 1.00 39.37 N
ATOM 18 C4 C A1088 44.644 99.256 118.008 1.00 38.90 C
ATOM 19 N4 C A1088 45.541 98.502 117.369 1.00 38.65 N
ATOM 20 C5 C A1088 44.569 100.654 117.760 1.00 39.65 C
ATOM 21 C6 C A1088 43.657 101.352 118.450 1.00 39.86 C
ATOM 22 P U A1089 44.078 104.535 123.357 1.00 48.40 P
ATOM 23 OP1 U A1089 43.756 104.895 124.756 1.00 46.02 O
ATOM 24 OP2 U A1089 44.486 105.600 122.396 1.00 47.48 O
ATOM 25 O5' U A1089 45.228 103.442 123.405 1.00 51.20 O
TER
ATOM 1 O3' C B1086 49.481 101.219 114.871 1.00 35.87 O
ATOM 2 P U B1087 48.301 100.914 115.916 1.00 35.73 P
ATOM 3 OP1 U B1087 48.895 100.910 117.270 1.00 33.91 O
ATOM 4 OP2 U B1087 47.581 99.719 115.423 1.00 33.71 O
ATOM 5 O5' U B1087 47.357 102.187 115.833 1.00 33.84 O
ATOM 6 C5' U B1087 47.856 103.483 116.171 1.00 32.79 C
ATOM 7 C4' U B1087 46.787 104.521 115.973 1.00 32.82 C
ATOM 8 O4' U B1087 46.522 104.693 114.556 1.00 33.65 O
ATOM 9 C3' U B1087 45.443 104.203 116.616 1.00 33.54 C
ATOM 10 O3' U B1087 44.875 105.416 117.067 1.00 36.50 O
ATOM 11 C2' U B1087 44.614 103.697 115.447 1.00 33.26 C
ATOM 12 O2' U B1087 43.234 103.917 115.649 1.00 34.36 O
ATOM 13 C1' U B1087 45.134 104.597 114.339 1.00 33.96 C
ATOM 14 N1 U B1087 44.881 104.138 112.969 1.00 34.69 N
ATOM 15 C2 U B1087 44.279 105.039 112.114 1.00 35.74 C
ATOM 16 O2 U B1087 43.995 106.174 112.442 1.00 37.18 O
ATOM 17 N3 U B1087 44.026 104.564 110.855 1.00 35.77 N
ATOM 18 C4 U B1087 44.312 103.314 110.370 1.00 35.86 C
ATOM 19 O4 U B1087 44.069 103.056 109.197 1.00 36.38 O
ATOM 20 C5 U B1087 44.946 102.441 111.304 1.00 36.33 C
ATOM 21 C6 U B1087 45.208 102.873 112.542 1.00 36.26 C
ATOM 22 P C B1088 44.895 105.751 118.628 1.00 41.81 P
ATOM 23 OP1 C B1088 44.255 107.084 118.834 1.00 40.02 O
ATOM 24 OP2 C B1088 46.291 105.525 119.094 1.00 41.13 O
ATOM 25 O5' C B1088 43.947 104.630 119.256 1.00 39.39 O
TER
Atoms:
C2: (42.920,99.363,119.565)
OP1: (44.255,107.084,118.834)
OP2: (46.291,105.525,119.094)
C4: (44.644,99.256,118.008)
O5': (43.947,104.630,119.256)
C3': (42.892,103.067,121.542)
C1': (41.828,101.515,120.111)
O4': (41.721,102.805,119.533)
C5': (42.691,104.996,119.863)
P: (44.895,105.751,118.628)
O2: (42.156,98.830,120.380)
C4': (42.047,103.805,120.525)
C2': (42.208,101.705,121.583)
O2': (41.015,101.713,122.338)
N1: (42.828,100.740,119.350)
N3: (43.838,98.650,118.880)
N4: (45.541,98.502,117.369)
C6: (43.657,101.352,118.450)
C5: (44.569,100.654,117.760)
O3': (42.809,103.730,122.795)
OP1: (44.255,107.084,118.834)
OP2: (46.291,105.525,119.094)
C4: (44.644,99.256,118.008)
O5': (43.947,104.630,119.256)
C3': (42.892,103.067,121.542)
C1': (41.828,101.515,120.111)
O4': (41.721,102.805,119.533)
C5': (42.691,104.996,119.863)
P: (44.895,105.751,118.628)
O2: (42.156,98.830,120.380)
C4': (42.047,103.805,120.525)
C2': (42.208,101.705,121.583)
O2': (41.015,101.713,122.338)
N1: (42.828,100.740,119.350)
N3: (43.838,98.650,118.880)
N4: (45.541,98.502,117.369)
C6: (43.657,101.352,118.450)
C5: (44.569,100.654,117.760)
O3': (42.809,103.730,122.795)
C4: (44.312,103.314,110.370)
N3: (44.026,104.564,110.855)
OP1: (48.895,100.910,117.270)
OP2: (47.581,99.719,115.423)
C2: (44.279,105.039,112.114)
C1': (45.134,104.597,114.339)
C3': (45.443,104.203,116.616)
O5': (47.357,102.187,115.833)
O4': (46.522,104.693,114.556)
C5': (47.856,103.483,116.171)
P: (48.301,100.914,115.916)
C4': (46.787,104.521,115.973)
C2': (44.614,103.697,115.447)
O2': (43.234,103.917,115.649)
N1: (44.881,104.138,112.969)
O4: (44.069,103.056,109.197)
O2: (43.995,106.174,112.442)
C6: (45.208,102.873,112.542)
C5: (44.946,102.441,111.304)
O3': (44.875,105.416,117.067)
N3: (44.026,104.564,110.855)
OP1: (48.895,100.910,117.270)
OP2: (47.581,99.719,115.423)
C2: (44.279,105.039,112.114)
C1': (45.134,104.597,114.339)
C3': (45.443,104.203,116.616)
O5': (47.357,102.187,115.833)
O4': (46.522,104.693,114.556)
C5': (47.856,103.483,116.171)
P: (48.301,100.914,115.916)
C4': (46.787,104.521,115.973)
C2': (44.614,103.697,115.447)
O2': (43.234,103.917,115.649)
N1: (44.881,104.138,112.969)
O4: (44.069,103.056,109.197)
O2: (43.995,106.174,112.442)
C6: (45.208,102.873,112.542)
C5: (44.946,102.441,111.304)
O3': (44.875,105.416,117.067)
Image (generated by PyMOL):