Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A39:A10
Extra
PDB:
ATOM 1 O3' C A 38 21.732 16.095 10.546 1.00 26.02 O
ATOM 2 P C A 39 22.534 17.261 11.314 1.00 27.90 P
ATOM 3 OP1 C A 39 21.564 18.202 11.928 1.00 29.60 O
ATOM 4 OP2 C A 39 23.553 17.778 10.369 1.00 28.36 O
ATOM 5 O5' C A 39 23.316 16.465 12.454 1.00 28.51 O
ATOM 6 C5' C A 39 23.020 16.661 13.824 1.00 26.21 C
ATOM 7 C4' C A 39 22.744 15.339 14.512 1.00 24.74 C
ATOM 8 O4' C A 39 21.949 14.457 13.681 1.00 22.13 O
ATOM 9 C3' C A 39 23.898 14.414 14.871 1.00 24.34 C
ATOM 10 O3' C A 39 24.702 14.910 15.939 1.00 25.10 O
ATOM 11 C2' C A 39 23.109 13.189 15.311 1.00 22.66 C
ATOM 12 O2' C A 39 22.475 13.390 16.558 1.00 23.58 O
ATOM 13 C1' C A 39 22.021 13.147 14.232 1.00 21.94 C
ATOM 14 N1 C A 39 22.338 12.174 13.173 1.00 18.90 N
ATOM 15 C2 C A 39 22.204 10.822 13.475 1.00 18.85 C
ATOM 16 O2 C A 39 21.806 10.505 14.603 1.00 17.86 O
ATOM 17 N3 C A 39 22.508 9.897 12.536 1.00 18.21 N
ATOM 18 C4 C A 39 22.928 10.283 11.333 1.00 17.54 C
ATOM 19 N4 C A 39 23.221 9.334 10.441 1.00 16.94 N
ATOM 20 C5 C A 39 23.066 11.661 10.991 1.00 17.95 C
ATOM 21 C6 C A 39 22.762 12.566 11.935 1.00 18.44 C
ATOM 22 P G A 40 26.182 14.309 16.175 1.00 25.33 P
ATOM 23 OP1 G A 40 26.902 15.253 17.068 1.00 26.96 O
ATOM 24 OP2 G A 40 26.766 13.968 14.857 1.00 26.20 O
ATOM 25 O5' G A 40 25.931 12.950 16.965 1.00 24.17 O
TER
ATOM 1 O3' A B 9 21.522 11.266 7.446 1.00 22.34 O
ATOM 2 P U B 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 3 OP1 U B 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 4 OP2 U B 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 5 O5' U B 10 23.092 11.168 5.463 1.00 23.61 O
ATOM 6 C5' U B 10 23.019 10.042 4.594 1.00 24.83 C
ATOM 7 C4' U B 10 22.435 10.453 3.257 1.00 24.96 C
ATOM 8 O4' U B 10 21.044 10.836 3.451 1.00 25.18 O
ATOM 9 C3' U B 10 23.045 11.676 2.581 1.00 24.84 C
ATOM 10 O3' U B 10 24.219 11.364 1.833 1.00 25.54 O
ATOM 11 C2' U B 10 21.919 12.091 1.648 1.00 25.10 C
ATOM 12 O2' U B 10 21.818 11.262 0.508 1.00 25.34 O
ATOM 13 C1' U B 10 20.703 11.876 2.548 1.00 24.64 C
ATOM 14 N1 U B 10 20.360 13.082 3.317 1.00 24.32 N
ATOM 15 C2 U B 10 19.818 14.143 2.617 1.00 24.57 C
ATOM 16 O2 U B 10 19.614 14.108 1.414 1.00 24.57 O
ATOM 17 N3 U B 10 19.523 15.249 3.372 1.00 24.15 N
ATOM 18 C4 U B 10 19.713 15.403 4.727 1.00 23.79 C
ATOM 19 O4 U B 10 19.411 16.472 5.259 1.00 22.92 O
ATOM 20 C5 U B 10 20.274 14.261 5.386 1.00 23.23 C
ATOM 21 C6 U B 10 20.570 13.164 4.675 1.00 24.20 C
ATOM 22 P C B 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 23 OP1 C B 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 24 OP2 C B 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 25 O5' C B 11 24.614 13.418 0.378 1.00 25.47 O
TER
ATOM 2 P C A 39 22.534 17.261 11.314 1.00 27.90 P
ATOM 3 OP1 C A 39 21.564 18.202 11.928 1.00 29.60 O
ATOM 4 OP2 C A 39 23.553 17.778 10.369 1.00 28.36 O
ATOM 5 O5' C A 39 23.316 16.465 12.454 1.00 28.51 O
ATOM 6 C5' C A 39 23.020 16.661 13.824 1.00 26.21 C
ATOM 7 C4' C A 39 22.744 15.339 14.512 1.00 24.74 C
ATOM 8 O4' C A 39 21.949 14.457 13.681 1.00 22.13 O
ATOM 9 C3' C A 39 23.898 14.414 14.871 1.00 24.34 C
ATOM 10 O3' C A 39 24.702 14.910 15.939 1.00 25.10 O
ATOM 11 C2' C A 39 23.109 13.189 15.311 1.00 22.66 C
ATOM 12 O2' C A 39 22.475 13.390 16.558 1.00 23.58 O
ATOM 13 C1' C A 39 22.021 13.147 14.232 1.00 21.94 C
ATOM 14 N1 C A 39 22.338 12.174 13.173 1.00 18.90 N
ATOM 15 C2 C A 39 22.204 10.822 13.475 1.00 18.85 C
ATOM 16 O2 C A 39 21.806 10.505 14.603 1.00 17.86 O
ATOM 17 N3 C A 39 22.508 9.897 12.536 1.00 18.21 N
ATOM 18 C4 C A 39 22.928 10.283 11.333 1.00 17.54 C
ATOM 19 N4 C A 39 23.221 9.334 10.441 1.00 16.94 N
ATOM 20 C5 C A 39 23.066 11.661 10.991 1.00 17.95 C
ATOM 21 C6 C A 39 22.762 12.566 11.935 1.00 18.44 C
ATOM 22 P G A 40 26.182 14.309 16.175 1.00 25.33 P
ATOM 23 OP1 G A 40 26.902 15.253 17.068 1.00 26.96 O
ATOM 24 OP2 G A 40 26.766 13.968 14.857 1.00 26.20 O
ATOM 25 O5' G A 40 25.931 12.950 16.965 1.00 24.17 O
TER
ATOM 1 O3' A B 9 21.522 11.266 7.446 1.00 22.34 O
ATOM 2 P U B 10 23.067 11.010 7.050 1.00 22.56 P
ATOM 3 OP1 U B 10 23.436 9.627 7.448 1.00 21.79 O
ATOM 4 OP2 U B 10 23.850 12.152 7.582 1.00 24.08 O
ATOM 5 O5' U B 10 23.092 11.168 5.463 1.00 23.61 O
ATOM 6 C5' U B 10 23.019 10.042 4.594 1.00 24.83 C
ATOM 7 C4' U B 10 22.435 10.453 3.257 1.00 24.96 C
ATOM 8 O4' U B 10 21.044 10.836 3.451 1.00 25.18 O
ATOM 9 C3' U B 10 23.045 11.676 2.581 1.00 24.84 C
ATOM 10 O3' U B 10 24.219 11.364 1.833 1.00 25.54 O
ATOM 11 C2' U B 10 21.919 12.091 1.648 1.00 25.10 C
ATOM 12 O2' U B 10 21.818 11.262 0.508 1.00 25.34 O
ATOM 13 C1' U B 10 20.703 11.876 2.548 1.00 24.64 C
ATOM 14 N1 U B 10 20.360 13.082 3.317 1.00 24.32 N
ATOM 15 C2 U B 10 19.818 14.143 2.617 1.00 24.57 C
ATOM 16 O2 U B 10 19.614 14.108 1.414 1.00 24.57 O
ATOM 17 N3 U B 10 19.523 15.249 3.372 1.00 24.15 N
ATOM 18 C4 U B 10 19.713 15.403 4.727 1.00 23.79 C
ATOM 19 O4 U B 10 19.411 16.472 5.259 1.00 22.92 O
ATOM 20 C5 U B 10 20.274 14.261 5.386 1.00 23.23 C
ATOM 21 C6 U B 10 20.570 13.164 4.675 1.00 24.20 C
ATOM 22 P C B 11 25.296 12.520 1.510 1.00 25.38 P
ATOM 23 OP1 C B 11 26.492 11.864 0.928 1.00 26.20 O
ATOM 24 OP2 C B 11 25.443 13.363 2.726 1.00 24.76 O
ATOM 25 O5' C B 11 24.614 13.418 0.378 1.00 25.47 O
TER
Atoms:
C2: (22.204,10.822,13.475)
OP1: (21.564,18.202,11.928)
OP2: (23.553,17.778,10.369)
C4: (22.928,10.283,11.333)
O5': (23.316,16.465,12.454)
C3': (23.898,14.414,14.871)
C1': (22.021,13.147,14.232)
O4': (21.949,14.457,13.681)
C5': (23.020,16.661,13.824)
P: (22.534,17.261,11.314)
O2: (21.806,10.505,14.603)
C4': (22.744,15.339,14.512)
C2': (23.109,13.189,15.311)
O2': (22.475,13.390,16.558)
N1: (22.338,12.174,13.173)
N3: (22.508,9.897,12.536)
N4: (23.221,9.334,10.441)
C6: (22.762,12.566,11.935)
C5: (23.066,11.661,10.991)
O3': (24.702,14.910,15.939)
OP1: (21.564,18.202,11.928)
OP2: (23.553,17.778,10.369)
C4: (22.928,10.283,11.333)
O5': (23.316,16.465,12.454)
C3': (23.898,14.414,14.871)
C1': (22.021,13.147,14.232)
O4': (21.949,14.457,13.681)
C5': (23.020,16.661,13.824)
P: (22.534,17.261,11.314)
O2: (21.806,10.505,14.603)
C4': (22.744,15.339,14.512)
C2': (23.109,13.189,15.311)
O2': (22.475,13.390,16.558)
N1: (22.338,12.174,13.173)
N3: (22.508,9.897,12.536)
N4: (23.221,9.334,10.441)
C6: (22.762,12.566,11.935)
C5: (23.066,11.661,10.991)
O3': (24.702,14.910,15.939)
C4: (19.713,15.403,4.727)
N3: (19.523,15.249,3.372)
OP1: (23.436,9.627,7.448)
OP2: (23.850,12.152,7.582)
C2: (19.818,14.143,2.617)
C1': (20.703,11.876,2.548)
C3': (23.045,11.676,2.581)
O5': (23.092,11.168,5.463)
O4': (21.044,10.836,3.451)
C5': (23.019,10.042,4.594)
P: (23.067,11.010,7.050)
C4': (22.435,10.453,3.257)
C2': (21.919,12.091,1.648)
O2': (21.818,11.262,0.508)
N1: (20.360,13.082,3.317)
O4: (19.411,16.472,5.259)
O2: (19.614,14.108,1.414)
C6: (20.570,13.164,4.675)
C5: (20.274,14.261,5.386)
O3': (24.219,11.364,1.833)
N3: (19.523,15.249,3.372)
OP1: (23.436,9.627,7.448)
OP2: (23.850,12.152,7.582)
C2: (19.818,14.143,2.617)
C1': (20.703,11.876,2.548)
C3': (23.045,11.676,2.581)
O5': (23.092,11.168,5.463)
O4': (21.044,10.836,3.451)
C5': (23.019,10.042,4.594)
P: (23.067,11.010,7.050)
C4': (22.435,10.453,3.257)
C2': (21.919,12.091,1.648)
O2': (21.818,11.262,0.508)
N1: (20.360,13.082,3.317)
O4: (19.411,16.472,5.259)
O2: (19.614,14.108,1.414)
C6: (20.570,13.164,4.675)
C5: (20.274,14.261,5.386)
O3': (24.219,11.364,1.833)
Image (generated by PyMOL):