Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11870:11869
Extra
PDB:
ATOM 1 O3' U A1869 -19.107 18.741 99.375 1.00 49.67 O
ATOM 2 P C A1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 3 OP1 C A1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 4 OP2 C A1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 5 O5' C A1870 -20.224 20.903 99.847 1.00 54.62 O
ATOM 6 C5' C A1870 -19.382 21.910 100.354 1.00 54.71 C
ATOM 7 C4' C A1870 -19.910 23.290 100.049 1.00 55.12 C
ATOM 8 O4' C A1870 -20.188 23.404 98.628 1.00 54.97 O
ATOM 9 C3' C A1870 -21.203 23.675 100.757 1.00 55.69 C
ATOM 10 O3' C A1870 -21.191 25.074 101.003 1.00 56.08 O
ATOM 11 C2' C A1870 -22.241 23.398 99.700 1.00 55.72 C
ATOM 12 O2' C A1870 -23.440 24.107 99.883 1.00 56.27 O
ATOM 13 C1' C A1870 -21.496 23.868 98.459 1.00 55.41 C
ATOM 14 N1 C A1870 -22.008 23.332 97.204 1.00 55.21 N
ATOM 15 C2 C A1870 -22.528 24.254 96.282 1.00 55.43 C
ATOM 16 O2 C A1870 -22.514 25.444 96.564 1.00 55.76 O
ATOM 17 N3 C A1870 -23.014 23.820 95.103 1.00 55.29 N
ATOM 18 C4 C A1870 -22.959 22.500 94.866 1.00 54.93 C
ATOM 19 N4 C A1870 -23.430 22.095 93.694 1.00 54.80 N
ATOM 20 C5 C A1870 -22.455 21.526 95.789 1.00 54.70 C
ATOM 21 C6 C A1870 -21.975 21.984 96.950 1.00 54.85 C
ATOM 22 P G A1871 -21.070 25.621 102.491 1.00 51.94 P
ATOM 23 OP1 G A1871 -21.504 24.539 103.413 1.00 51.98 O
ATOM 24 OP2 G A1871 -21.769 26.919 102.528 1.00 52.48 O
ATOM 25 O5' G A1871 -19.528 25.846 102.643 1.00 51.61 O
TER
ATOM 1 O3' U B1868 -20.208 18.425 93.017 1.00 56.35 O
ATOM 2 P U B1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 3 OP1 U B1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 4 OP2 U B1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 5 O5' U B1869 -20.734 18.351 95.463 1.00 49.39 O
ATOM 6 C5' U B1869 -21.146 17.647 96.608 1.00 49.54 C
ATOM 7 C4' U B1869 -20.044 17.499 97.588 1.00 49.36 C
ATOM 8 O4' U B1869 -19.019 16.646 97.037 1.00 48.83 O
ATOM 9 C3' U B1869 -19.367 18.784 97.977 1.00 49.50 C
ATOM 10 O3' U B1869 -19.107 18.741 99.375 1.00 49.67 O
ATOM 11 C2' U B1869 -18.049 18.761 97.187 1.00 49.02 C
ATOM 12 O2' U B1869 -16.987 19.430 97.822 1.00 48.99 O
ATOM 13 C1' U B1869 -17.764 17.283 97.090 1.00 48.63 C
ATOM 14 N1 U B1869 -17.018 16.865 95.897 1.00 48.16 N
ATOM 15 C2 U B1869 -15.823 16.181 96.117 1.00 47.76 C
ATOM 16 O2 U B1869 -15.337 16.029 97.240 1.00 47.79 O
ATOM 17 N3 U B1869 -15.164 15.703 95.006 1.00 47.33 N
ATOM 18 C4 U B1869 -15.623 15.832 93.724 1.00 47.28 C
ATOM 19 O4 U B1869 -14.941 15.348 92.831 1.00 46.90 O
ATOM 20 C5 U B1869 -16.869 16.535 93.573 1.00 47.71 C
ATOM 21 C6 U B1869 -17.528 16.999 94.636 1.00 48.13 C
ATOM 22 P C B1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 23 OP1 C B1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 24 OP2 C B1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 25 O5' C B1870 -20.224 20.903 99.847 1.00 54.62 O
TER
ATOM 2 P C A1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 3 OP1 C A1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 4 OP2 C A1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 5 O5' C A1870 -20.224 20.903 99.847 1.00 54.62 O
ATOM 6 C5' C A1870 -19.382 21.910 100.354 1.00 54.71 C
ATOM 7 C4' C A1870 -19.910 23.290 100.049 1.00 55.12 C
ATOM 8 O4' C A1870 -20.188 23.404 98.628 1.00 54.97 O
ATOM 9 C3' C A1870 -21.203 23.675 100.757 1.00 55.69 C
ATOM 10 O3' C A1870 -21.191 25.074 101.003 1.00 56.08 O
ATOM 11 C2' C A1870 -22.241 23.398 99.700 1.00 55.72 C
ATOM 12 O2' C A1870 -23.440 24.107 99.883 1.00 56.27 O
ATOM 13 C1' C A1870 -21.496 23.868 98.459 1.00 55.41 C
ATOM 14 N1 C A1870 -22.008 23.332 97.204 1.00 55.21 N
ATOM 15 C2 C A1870 -22.528 24.254 96.282 1.00 55.43 C
ATOM 16 O2 C A1870 -22.514 25.444 96.564 1.00 55.76 O
ATOM 17 N3 C A1870 -23.014 23.820 95.103 1.00 55.29 N
ATOM 18 C4 C A1870 -22.959 22.500 94.866 1.00 54.93 C
ATOM 19 N4 C A1870 -23.430 22.095 93.694 1.00 54.80 N
ATOM 20 C5 C A1870 -22.455 21.526 95.789 1.00 54.70 C
ATOM 21 C6 C A1870 -21.975 21.984 96.950 1.00 54.85 C
ATOM 22 P G A1871 -21.070 25.621 102.491 1.00 51.94 P
ATOM 23 OP1 G A1871 -21.504 24.539 103.413 1.00 51.98 O
ATOM 24 OP2 G A1871 -21.769 26.919 102.528 1.00 52.48 O
ATOM 25 O5' G A1871 -19.528 25.846 102.643 1.00 51.61 O
TER
ATOM 1 O3' U B1868 -20.208 18.425 93.017 1.00 56.35 O
ATOM 2 P U B1869 -21.334 17.953 94.056 1.00 49.26 P
ATOM 3 OP1 U B1869 -21.401 16.470 93.956 1.00 48.98 O
ATOM 4 OP2 U B1869 -22.566 18.766 93.792 1.00 49.74 O
ATOM 5 O5' U B1869 -20.734 18.351 95.463 1.00 49.39 O
ATOM 6 C5' U B1869 -21.146 17.647 96.608 1.00 49.54 C
ATOM 7 C4' U B1869 -20.044 17.499 97.588 1.00 49.36 C
ATOM 8 O4' U B1869 -19.019 16.646 97.037 1.00 48.83 O
ATOM 9 C3' U B1869 -19.367 18.784 97.977 1.00 49.50 C
ATOM 10 O3' U B1869 -19.107 18.741 99.375 1.00 49.67 O
ATOM 11 C2' U B1869 -18.049 18.761 97.187 1.00 49.02 C
ATOM 12 O2' U B1869 -16.987 19.430 97.822 1.00 48.99 O
ATOM 13 C1' U B1869 -17.764 17.283 97.090 1.00 48.63 C
ATOM 14 N1 U B1869 -17.018 16.865 95.897 1.00 48.16 N
ATOM 15 C2 U B1869 -15.823 16.181 96.117 1.00 47.76 C
ATOM 16 O2 U B1869 -15.337 16.029 97.240 1.00 47.79 O
ATOM 17 N3 U B1869 -15.164 15.703 95.006 1.00 47.33 N
ATOM 18 C4 U B1869 -15.623 15.832 93.724 1.00 47.28 C
ATOM 19 O4 U B1869 -14.941 15.348 92.831 1.00 46.90 O
ATOM 20 C5 U B1869 -16.869 16.535 93.573 1.00 47.71 C
ATOM 21 C6 U B1869 -17.528 16.999 94.636 1.00 48.13 C
ATOM 22 P C B1870 -20.138 19.411 100.385 1.00 54.38 P
ATOM 23 OP1 C B1870 -19.517 19.381 101.702 1.00 54.45 O
ATOM 24 OP2 C B1870 -21.442 18.741 100.201 1.00 54.56 O
ATOM 25 O5' C B1870 -20.224 20.903 99.847 1.00 54.62 O
TER
Atoms:
C2: (-22.528,24.254,96.282)
OP1: (-19.517,19.381,101.702)
OP2: (-21.442,18.741,100.201)
C4: (-22.959,22.500,94.866)
O5': (-20.224,20.903,99.847)
C3': (-21.203,23.675,100.757)
C1': (-21.496,23.868,98.459)
O4': (-20.188,23.404,98.628)
C5': (-19.382,21.910,100.354)
P: (-20.138,19.411,100.385)
O2: (-22.514,25.444,96.564)
C4': (-19.910,23.290,100.049)
C2': (-22.241,23.398,99.700)
O2': (-23.440,24.107,99.883)
N1: (-22.008,23.332,97.204)
N3: (-23.014,23.820,95.103)
N4: (-23.430,22.095,93.694)
C6: (-21.975,21.984,96.950)
C5: (-22.455,21.526,95.789)
O3': (-21.191,25.074,101.003)
OP1: (-19.517,19.381,101.702)
OP2: (-21.442,18.741,100.201)
C4: (-22.959,22.500,94.866)
O5': (-20.224,20.903,99.847)
C3': (-21.203,23.675,100.757)
C1': (-21.496,23.868,98.459)
O4': (-20.188,23.404,98.628)
C5': (-19.382,21.910,100.354)
P: (-20.138,19.411,100.385)
O2: (-22.514,25.444,96.564)
C4': (-19.910,23.290,100.049)
C2': (-22.241,23.398,99.700)
O2': (-23.440,24.107,99.883)
N1: (-22.008,23.332,97.204)
N3: (-23.014,23.820,95.103)
N4: (-23.430,22.095,93.694)
C6: (-21.975,21.984,96.950)
C5: (-22.455,21.526,95.789)
O3': (-21.191,25.074,101.003)
C4: (-15.623,15.832,93.724)
N3: (-15.164,15.703,95.006)
OP1: (-21.401,16.470,93.956)
OP2: (-22.566,18.766,93.792)
C2: (-15.823,16.181,96.117)
C1': (-17.764,17.283,97.090)
C3': (-19.367,18.784,97.977)
O5': (-20.734,18.351,95.463)
O4': (-19.019,16.646,97.037)
C5': (-21.146,17.647,96.608)
P: (-21.334,17.953,94.056)
C4': (-20.044,17.499,97.588)
C2': (-18.049,18.761,97.187)
O2': (-16.987,19.430,97.822)
N1: (-17.018,16.865,95.897)
O4: (-14.941,15.348,92.831)
O2: (-15.337,16.029,97.240)
C6: (-17.528,16.999,94.636)
C5: (-16.869,16.535,93.573)
O3': (-19.107,18.741,99.375)
N3: (-15.164,15.703,95.006)
OP1: (-21.401,16.470,93.956)
OP2: (-22.566,18.766,93.792)
C2: (-15.823,16.181,96.117)
C1': (-17.764,17.283,97.090)
C3': (-19.367,18.784,97.977)
O5': (-20.734,18.351,95.463)
O4': (-19.019,16.646,97.037)
C5': (-21.146,17.647,96.608)
P: (-21.334,17.953,94.056)
C4': (-20.044,17.499,97.588)
C2': (-18.049,18.761,97.187)
O2': (-16.987,19.430,97.822)
N1: (-17.018,16.865,95.897)
O4: (-14.941,15.348,92.831)
O2: (-15.337,16.029,97.240)
C6: (-17.528,16.999,94.636)
C5: (-16.869,16.535,93.573)
O3': (-19.107,18.741,99.375)
Image (generated by PyMOL):