Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1085:A1084
Extra
PDB:
ATOM 1 O3' U A1084 42.572 94.005 115.228 1.00 39.62 O
ATOM 2 P C A1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 3 OP1 C A1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 4 OP2 C A1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 5 O5' C A1085 43.976 96.021 114.867 1.00 38.56 O
ATOM 6 C5' C A1085 44.016 95.962 113.443 1.00 35.88 C
ATOM 7 C4' C A1085 44.135 97.341 112.857 1.00 36.03 C
ATOM 8 O4' C A1085 43.030 98.118 113.350 1.00 35.39 O
ATOM 9 C3' C A1085 45.391 98.142 113.189 1.00 35.11 C
ATOM 10 O3' C A1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 11 C2' C A1085 44.972 98.909 114.438 1.00 33.42 C
ATOM 12 O2' C A1085 45.641 100.133 114.605 1.00 34.42 O
ATOM 13 C1' C A1085 43.513 99.189 114.128 1.00 32.78 C
ATOM 14 N1 C A1085 42.649 99.313 115.302 1.00 30.36 N
ATOM 15 C2 C A1085 42.049 100.534 115.533 1.00 31.71 C
ATOM 16 O2 C A1085 42.357 101.486 114.802 1.00 34.47 O
ATOM 17 N3 C A1085 41.160 100.656 116.543 1.00 30.34 N
ATOM 18 C4 C A1085 40.895 99.602 117.324 1.00 30.13 C
ATOM 19 N4 C A1085 39.982 99.748 118.286 1.00 30.36 N
ATOM 20 C5 C A1085 41.549 98.346 117.143 1.00 29.82 C
ATOM 21 C6 C A1085 42.407 98.249 116.128 1.00 29.08 C
ATOM 22 P C A1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 23 OP1 C A1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 24 OP2 C A1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 25 O5' C A1086 47.952 99.949 112.390 1.00 36.97 O
TER
ATOM 1 O3' A B1083 38.391 94.694 119.604 1.00 37.74 O
ATOM 2 P U B1084 39.782 95.452 119.485 1.00 36.53 P
ATOM 3 OP1 U B1084 40.756 94.771 120.386 1.00 35.89 O
ATOM 4 OP2 U B1084 39.495 96.878 119.662 1.00 34.71 O
ATOM 5 O5' U B1084 40.205 95.198 117.972 1.00 36.57 O
ATOM 6 C5' U B1084 40.293 93.856 117.440 1.00 37.71 C
ATOM 7 C4' U B1084 40.278 93.882 115.931 1.00 39.09 C
ATOM 8 O4' U B1084 39.039 94.457 115.467 1.00 39.77 O
ATOM 9 C3' U B1084 41.357 94.749 115.313 1.00 39.55 C
ATOM 10 O3' U B1084 42.572 94.005 115.228 1.00 39.62 O
ATOM 11 C2' U B1084 40.770 95.133 113.953 1.00 40.13 C
ATOM 12 O2' U B1084 40.944 94.165 112.935 1.00 40.78 O
ATOM 13 C1' U B1084 39.272 95.188 114.270 1.00 40.26 C
ATOM 14 N1 U B1084 38.659 96.519 114.406 1.00 39.25 N
ATOM 15 C2 U B1084 38.290 97.207 113.254 1.00 39.63 C
ATOM 16 O2 U B1084 38.499 96.793 112.126 1.00 41.74 O
ATOM 17 N3 U B1084 37.664 98.402 113.478 1.00 39.46 N
ATOM 18 C4 U B1084 37.389 98.976 114.707 1.00 40.83 C
ATOM 19 O4 U B1084 36.801 100.061 114.764 1.00 42.71 O
ATOM 20 C5 U B1084 37.824 98.218 115.824 1.00 40.47 C
ATOM 21 C6 U B1084 38.430 97.049 115.640 1.00 39.46 C
ATOM 22 P C B1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 23 OP1 C B1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 24 OP2 C B1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 25 O5' C B1085 43.976 96.021 114.867 1.00 38.56 O
TER
ATOM 2 P C A1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 3 OP1 C A1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 4 OP2 C A1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 5 O5' C A1085 43.976 96.021 114.867 1.00 38.56 O
ATOM 6 C5' C A1085 44.016 95.962 113.443 1.00 35.88 C
ATOM 7 C4' C A1085 44.135 97.341 112.857 1.00 36.03 C
ATOM 8 O4' C A1085 43.030 98.118 113.350 1.00 35.39 O
ATOM 9 C3' C A1085 45.391 98.142 113.189 1.00 35.11 C
ATOM 10 O3' C A1085 45.649 99.016 112.085 1.00 36.14 O
ATOM 11 C2' C A1085 44.972 98.909 114.438 1.00 33.42 C
ATOM 12 O2' C A1085 45.641 100.133 114.605 1.00 34.42 O
ATOM 13 C1' C A1085 43.513 99.189 114.128 1.00 32.78 C
ATOM 14 N1 C A1085 42.649 99.313 115.302 1.00 30.36 N
ATOM 15 C2 C A1085 42.049 100.534 115.533 1.00 31.71 C
ATOM 16 O2 C A1085 42.357 101.486 114.802 1.00 34.47 O
ATOM 17 N3 C A1085 41.160 100.656 116.543 1.00 30.34 N
ATOM 18 C4 C A1085 40.895 99.602 117.324 1.00 30.13 C
ATOM 19 N4 C A1085 39.982 99.748 118.286 1.00 30.36 N
ATOM 20 C5 C A1085 41.549 98.346 117.143 1.00 29.82 C
ATOM 21 C6 C A1085 42.407 98.249 116.128 1.00 29.08 C
ATOM 22 P C A1086 47.109 99.049 111.399 1.00 36.94 P
ATOM 23 OP1 C A1086 47.008 99.819 110.144 1.00 37.73 O
ATOM 24 OP2 C A1086 47.692 97.685 111.381 1.00 35.32 O
ATOM 25 O5' C A1086 47.952 99.949 112.390 1.00 36.97 O
TER
ATOM 1 O3' A B1083 38.391 94.694 119.604 1.00 37.74 O
ATOM 2 P U B1084 39.782 95.452 119.485 1.00 36.53 P
ATOM 3 OP1 U B1084 40.756 94.771 120.386 1.00 35.89 O
ATOM 4 OP2 U B1084 39.495 96.878 119.662 1.00 34.71 O
ATOM 5 O5' U B1084 40.205 95.198 117.972 1.00 36.57 O
ATOM 6 C5' U B1084 40.293 93.856 117.440 1.00 37.71 C
ATOM 7 C4' U B1084 40.278 93.882 115.931 1.00 39.09 C
ATOM 8 O4' U B1084 39.039 94.457 115.467 1.00 39.77 O
ATOM 9 C3' U B1084 41.357 94.749 115.313 1.00 39.55 C
ATOM 10 O3' U B1084 42.572 94.005 115.228 1.00 39.62 O
ATOM 11 C2' U B1084 40.770 95.133 113.953 1.00 40.13 C
ATOM 12 O2' U B1084 40.944 94.165 112.935 1.00 40.78 O
ATOM 13 C1' U B1084 39.272 95.188 114.270 1.00 40.26 C
ATOM 14 N1 U B1084 38.659 96.519 114.406 1.00 39.25 N
ATOM 15 C2 U B1084 38.290 97.207 113.254 1.00 39.63 C
ATOM 16 O2 U B1084 38.499 96.793 112.126 1.00 41.74 O
ATOM 17 N3 U B1084 37.664 98.402 113.478 1.00 39.46 N
ATOM 18 C4 U B1084 37.389 98.976 114.707 1.00 40.83 C
ATOM 19 O4 U B1084 36.801 100.061 114.764 1.00 42.71 O
ATOM 20 C5 U B1084 37.824 98.218 115.824 1.00 40.47 C
ATOM 21 C6 U B1084 38.430 97.049 115.640 1.00 39.46 C
ATOM 22 P C B1085 43.944 94.674 115.704 1.00 40.02 P
ATOM 23 OP1 C B1085 45.056 93.854 115.182 1.00 40.57 O
ATOM 24 OP2 C B1085 43.855 94.954 117.163 1.00 38.58 O
ATOM 25 O5' C B1085 43.976 96.021 114.867 1.00 38.56 O
TER
Atoms:
C2: (42.049,100.534,115.533)
OP1: (45.056,93.854,115.182)
OP2: (43.855,94.954,117.163)
C4: (40.895,99.602,117.324)
O5': (43.976,96.021,114.867)
C3': (45.391,98.142,113.189)
C1': (43.513,99.189,114.128)
O4': (43.030,98.118,113.350)
C5': (44.016,95.962,113.443)
P: (43.944,94.674,115.704)
O2: (42.357,101.486,114.802)
C4': (44.135,97.341,112.857)
C2': (44.972,98.909,114.438)
O2': (45.641,100.133,114.605)
N1: (42.649,99.313,115.302)
N3: (41.160,100.656,116.543)
N4: (39.982,99.748,118.286)
C6: (42.407,98.249,116.128)
C5: (41.549,98.346,117.143)
O3': (45.649,99.016,112.085)
OP1: (45.056,93.854,115.182)
OP2: (43.855,94.954,117.163)
C4: (40.895,99.602,117.324)
O5': (43.976,96.021,114.867)
C3': (45.391,98.142,113.189)
C1': (43.513,99.189,114.128)
O4': (43.030,98.118,113.350)
C5': (44.016,95.962,113.443)
P: (43.944,94.674,115.704)
O2: (42.357,101.486,114.802)
C4': (44.135,97.341,112.857)
C2': (44.972,98.909,114.438)
O2': (45.641,100.133,114.605)
N1: (42.649,99.313,115.302)
N3: (41.160,100.656,116.543)
N4: (39.982,99.748,118.286)
C6: (42.407,98.249,116.128)
C5: (41.549,98.346,117.143)
O3': (45.649,99.016,112.085)
C4: (37.389,98.976,114.707)
N3: (37.664,98.402,113.478)
OP1: (40.756,94.771,120.386)
OP2: (39.495,96.878,119.662)
C2: (38.290,97.207,113.254)
C1': (39.272,95.188,114.270)
C3': (41.357,94.749,115.313)
O5': (40.205,95.198,117.972)
O4': (39.039,94.457,115.467)
C5': (40.293,93.856,117.440)
P: (39.782,95.452,119.485)
C4': (40.278,93.882,115.931)
C2': (40.770,95.133,113.953)
O2': (40.944,94.165,112.935)
N1: (38.659,96.519,114.406)
O4: (36.801,100.061,114.764)
O2: (38.499,96.793,112.126)
C6: (38.430,97.049,115.640)
C5: (37.824,98.218,115.824)
O3': (42.572,94.005,115.228)
N3: (37.664,98.402,113.478)
OP1: (40.756,94.771,120.386)
OP2: (39.495,96.878,119.662)
C2: (38.290,97.207,113.254)
C1': (39.272,95.188,114.270)
C3': (41.357,94.749,115.313)
O5': (40.205,95.198,117.972)
O4': (39.039,94.457,115.467)
C5': (40.293,93.856,117.440)
P: (39.782,95.452,119.485)
C4': (40.278,93.882,115.931)
C2': (40.770,95.133,113.953)
O2': (40.944,94.165,112.935)
N1: (38.659,96.519,114.406)
O4: (36.801,100.061,114.764)
O2: (38.499,96.793,112.126)
C6: (38.430,97.049,115.640)
C5: (37.824,98.218,115.824)
O3': (42.572,94.005,115.228)
Image (generated by PyMOL):