Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01395:01394
Extra
PDB:
ATOM 1 O3' U A1394 50.270 178.790 73.557 1.00 38.37 O
ATOM 2 P C A1395 51.352 178.535 72.418 1.00 41.49 P
ATOM 3 OP1 C A1395 51.854 179.858 71.959 1.00 43.26 O
ATOM 4 OP2 C A1395 50.732 177.599 71.444 1.00 39.80 O
ATOM 5 O5' C A1395 52.528 177.785 73.183 1.00 40.69 O
ATOM 6 C5' C A1395 53.414 178.510 74.061 1.00 41.26 C
ATOM 7 C4' C A1395 54.526 177.609 74.544 1.00 40.32 C
ATOM 8 O4' C A1395 54.028 176.694 75.548 1.00 39.05 O
ATOM 9 C3' C A1395 55.122 176.719 73.470 1.00 39.97 C
ATOM 10 O3' C A1395 56.097 177.419 72.708 1.00 40.88 O
ATOM 11 C2' C A1395 55.695 175.565 74.278 1.00 39.45 C
ATOM 12 O2' C A1395 56.950 175.873 74.851 1.00 38.02 O
ATOM 13 C1' C A1395 54.646 175.430 75.388 1.00 39.44 C
ATOM 14 N1 C A1395 53.590 174.428 75.134 1.00 40.76 N
ATOM 15 C2 C A1395 53.884 173.060 75.298 1.00 42.11 C
ATOM 16 O2 C A1395 55.036 172.717 75.615 1.00 42.78 O
ATOM 17 N3 C A1395 52.905 172.150 75.101 1.00 41.64 N
ATOM 18 C4 C A1395 51.683 172.552 74.749 1.00 42.45 C
ATOM 19 N4 C A1395 50.743 171.620 74.577 1.00 43.84 N
ATOM 20 C5 C A1395 51.365 173.927 74.559 1.00 41.09 C
ATOM 21 C6 C A1395 52.336 174.820 74.759 1.00 40.05 C
ATOM 22 P A A1396 56.346 177.012 71.180 1.00 41.14 P
ATOM 23 OP1 A A1396 57.435 177.861 70.644 1.00 42.46 O
ATOM 24 OP2 A A1396 55.034 176.970 70.480 1.00 41.73 O
ATOM 25 O5' A A1396 56.902 175.530 71.298 1.00 40.33 O
TER
ATOM 1 O3' A B1393 47.415 174.330 76.955 1.00 41.39 O
ATOM 2 P U B1394 47.289 174.162 75.366 1.00 43.25 P
ATOM 3 OP1 U B1394 45.865 174.443 75.061 1.00 43.97 O
ATOM 4 OP2 U B1394 47.909 172.886 74.895 1.00 42.27 O
ATOM 5 O5' U B1394 48.169 175.364 74.819 1.00 40.26 O
ATOM 6 C5' U B1394 47.785 176.093 73.651 1.00 40.09 C
ATOM 7 C4' U B1394 48.259 177.518 73.766 1.00 39.42 C
ATOM 8 O4' U B1394 47.452 178.216 74.750 1.00 38.63 O
ATOM 9 C3' U B1394 49.704 177.683 74.214 1.00 39.64 C
ATOM 10 O3' U B1394 50.270 178.790 73.557 1.00 38.37 O
ATOM 11 C2' U B1394 49.573 177.946 75.707 1.00 39.80 C
ATOM 12 O2' U B1394 50.652 178.679 76.251 1.00 41.56 O
ATOM 13 C1' U B1394 48.281 178.751 75.755 1.00 38.50 C
ATOM 14 N1 U B1394 47.559 178.639 77.026 1.00 39.71 N
ATOM 15 C2 U B1394 47.027 179.790 77.561 1.00 40.97 C
ATOM 16 O2 U B1394 47.148 180.885 77.037 1.00 42.73 O
ATOM 17 N3 U B1394 46.349 179.615 78.738 1.00 40.15 N
ATOM 18 C4 U B1394 46.156 178.435 79.414 1.00 39.48 C
ATOM 19 O4 U B1394 45.478 178.433 80.435 1.00 43.85 O
ATOM 20 C5 U B1394 46.743 177.293 78.804 1.00 38.61 C
ATOM 21 C6 U B1394 47.408 177.427 77.661 1.00 39.37 C
ATOM 22 P C B1395 51.352 178.535 72.418 1.00 41.49 P
ATOM 23 OP1 C B1395 51.854 179.858 71.959 1.00 43.26 O
ATOM 24 OP2 C B1395 50.732 177.599 71.444 1.00 39.80 O
ATOM 25 O5' C B1395 52.528 177.785 73.183 1.00 40.69 O
TER
ATOM 2 P C A1395 51.352 178.535 72.418 1.00 41.49 P
ATOM 3 OP1 C A1395 51.854 179.858 71.959 1.00 43.26 O
ATOM 4 OP2 C A1395 50.732 177.599 71.444 1.00 39.80 O
ATOM 5 O5' C A1395 52.528 177.785 73.183 1.00 40.69 O
ATOM 6 C5' C A1395 53.414 178.510 74.061 1.00 41.26 C
ATOM 7 C4' C A1395 54.526 177.609 74.544 1.00 40.32 C
ATOM 8 O4' C A1395 54.028 176.694 75.548 1.00 39.05 O
ATOM 9 C3' C A1395 55.122 176.719 73.470 1.00 39.97 C
ATOM 10 O3' C A1395 56.097 177.419 72.708 1.00 40.88 O
ATOM 11 C2' C A1395 55.695 175.565 74.278 1.00 39.45 C
ATOM 12 O2' C A1395 56.950 175.873 74.851 1.00 38.02 O
ATOM 13 C1' C A1395 54.646 175.430 75.388 1.00 39.44 C
ATOM 14 N1 C A1395 53.590 174.428 75.134 1.00 40.76 N
ATOM 15 C2 C A1395 53.884 173.060 75.298 1.00 42.11 C
ATOM 16 O2 C A1395 55.036 172.717 75.615 1.00 42.78 O
ATOM 17 N3 C A1395 52.905 172.150 75.101 1.00 41.64 N
ATOM 18 C4 C A1395 51.683 172.552 74.749 1.00 42.45 C
ATOM 19 N4 C A1395 50.743 171.620 74.577 1.00 43.84 N
ATOM 20 C5 C A1395 51.365 173.927 74.559 1.00 41.09 C
ATOM 21 C6 C A1395 52.336 174.820 74.759 1.00 40.05 C
ATOM 22 P A A1396 56.346 177.012 71.180 1.00 41.14 P
ATOM 23 OP1 A A1396 57.435 177.861 70.644 1.00 42.46 O
ATOM 24 OP2 A A1396 55.034 176.970 70.480 1.00 41.73 O
ATOM 25 O5' A A1396 56.902 175.530 71.298 1.00 40.33 O
TER
ATOM 1 O3' A B1393 47.415 174.330 76.955 1.00 41.39 O
ATOM 2 P U B1394 47.289 174.162 75.366 1.00 43.25 P
ATOM 3 OP1 U B1394 45.865 174.443 75.061 1.00 43.97 O
ATOM 4 OP2 U B1394 47.909 172.886 74.895 1.00 42.27 O
ATOM 5 O5' U B1394 48.169 175.364 74.819 1.00 40.26 O
ATOM 6 C5' U B1394 47.785 176.093 73.651 1.00 40.09 C
ATOM 7 C4' U B1394 48.259 177.518 73.766 1.00 39.42 C
ATOM 8 O4' U B1394 47.452 178.216 74.750 1.00 38.63 O
ATOM 9 C3' U B1394 49.704 177.683 74.214 1.00 39.64 C
ATOM 10 O3' U B1394 50.270 178.790 73.557 1.00 38.37 O
ATOM 11 C2' U B1394 49.573 177.946 75.707 1.00 39.80 C
ATOM 12 O2' U B1394 50.652 178.679 76.251 1.00 41.56 O
ATOM 13 C1' U B1394 48.281 178.751 75.755 1.00 38.50 C
ATOM 14 N1 U B1394 47.559 178.639 77.026 1.00 39.71 N
ATOM 15 C2 U B1394 47.027 179.790 77.561 1.00 40.97 C
ATOM 16 O2 U B1394 47.148 180.885 77.037 1.00 42.73 O
ATOM 17 N3 U B1394 46.349 179.615 78.738 1.00 40.15 N
ATOM 18 C4 U B1394 46.156 178.435 79.414 1.00 39.48 C
ATOM 19 O4 U B1394 45.478 178.433 80.435 1.00 43.85 O
ATOM 20 C5 U B1394 46.743 177.293 78.804 1.00 38.61 C
ATOM 21 C6 U B1394 47.408 177.427 77.661 1.00 39.37 C
ATOM 22 P C B1395 51.352 178.535 72.418 1.00 41.49 P
ATOM 23 OP1 C B1395 51.854 179.858 71.959 1.00 43.26 O
ATOM 24 OP2 C B1395 50.732 177.599 71.444 1.00 39.80 O
ATOM 25 O5' C B1395 52.528 177.785 73.183 1.00 40.69 O
TER
Atoms:
C2: (53.884,173.060,75.298)
OP1: (51.854,179.858,71.959)
OP2: (50.732,177.599,71.444)
C4: (51.683,172.552,74.749)
O5': (52.528,177.785,73.183)
C3': (55.122,176.719,73.470)
C1': (54.646,175.430,75.388)
O4': (54.028,176.694,75.548)
C5': (53.414,178.510,74.061)
P: (51.352,178.535,72.418)
O2: (55.036,172.717,75.615)
C4': (54.526,177.609,74.544)
C2': (55.695,175.565,74.278)
O2': (56.950,175.873,74.851)
N1: (53.590,174.428,75.134)
N3: (52.905,172.150,75.101)
N4: (50.743,171.620,74.577)
C6: (52.336,174.820,74.759)
C5: (51.365,173.927,74.559)
O3': (56.097,177.419,72.708)
OP1: (51.854,179.858,71.959)
OP2: (50.732,177.599,71.444)
C4: (51.683,172.552,74.749)
O5': (52.528,177.785,73.183)
C3': (55.122,176.719,73.470)
C1': (54.646,175.430,75.388)
O4': (54.028,176.694,75.548)
C5': (53.414,178.510,74.061)
P: (51.352,178.535,72.418)
O2: (55.036,172.717,75.615)
C4': (54.526,177.609,74.544)
C2': (55.695,175.565,74.278)
O2': (56.950,175.873,74.851)
N1: (53.590,174.428,75.134)
N3: (52.905,172.150,75.101)
N4: (50.743,171.620,74.577)
C6: (52.336,174.820,74.759)
C5: (51.365,173.927,74.559)
O3': (56.097,177.419,72.708)
C4: (46.156,178.435,79.414)
N3: (46.349,179.615,78.738)
OP1: (45.865,174.443,75.061)
OP2: (47.909,172.886,74.895)
C2: (47.027,179.790,77.561)
C1': (48.281,178.751,75.755)
C3': (49.704,177.683,74.214)
O5': (48.169,175.364,74.819)
O4': (47.452,178.216,74.750)
C5': (47.785,176.093,73.651)
P: (47.289,174.162,75.366)
C4': (48.259,177.518,73.766)
C2': (49.573,177.946,75.707)
O2': (50.652,178.679,76.251)
N1: (47.559,178.639,77.026)
O4: (45.478,178.433,80.435)
O2: (47.148,180.885,77.037)
C6: (47.408,177.427,77.661)
C5: (46.743,177.293,78.804)
O3': (50.270,178.790,73.557)
N3: (46.349,179.615,78.738)
OP1: (45.865,174.443,75.061)
OP2: (47.909,172.886,74.895)
C2: (47.027,179.790,77.561)
C1': (48.281,178.751,75.755)
C3': (49.704,177.683,74.214)
O5': (48.169,175.364,74.819)
O4': (47.452,178.216,74.750)
C5': (47.785,176.093,73.651)
P: (47.289,174.162,75.366)
C4': (48.259,177.518,73.766)
C2': (49.573,177.946,75.707)
O2': (50.652,178.679,76.251)
N1: (47.559,178.639,77.026)
O4: (45.478,178.433,80.435)
O2: (47.148,180.885,77.037)
C6: (47.408,177.427,77.661)
C5: (46.743,177.293,78.804)
O3': (50.270,178.790,73.557)
Image (generated by PyMOL):