Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.377 120.667 104.084 1.00 36.59 O
ATOM 2 P C A2023 34.419 119.828 105.064 1.00 36.22 P
ATOM 3 OP1 C A2023 33.067 119.797 104.455 1.00 37.25 O
ATOM 4 OP2 C A2023 34.592 120.401 106.423 1.00 36.49 O
ATOM 5 O5' C A2023 35.037 118.359 105.070 1.00 33.99 O
ATOM 6 C5' C A2023 34.511 117.319 104.223 1.00 33.31 C
ATOM 7 C4' C A2023 34.931 115.960 104.742 1.00 32.66 C
ATOM 8 O4' C A2023 36.372 115.806 104.650 1.00 32.95 O
ATOM 9 C3' C A2023 34.610 115.739 106.208 1.00 33.01 C
ATOM 10 O3' C A2023 33.282 115.265 106.331 1.00 34.33 O
ATOM 11 C2' C A2023 35.637 114.697 106.625 1.00 32.79 C
ATOM 12 O2' C A2023 35.264 113.389 106.243 1.00 32.85 O
ATOM 13 C1' C A2023 36.855 115.130 105.803 1.00 32.78 C
ATOM 14 N1 C A2023 37.785 116.034 106.512 1.00 32.79 N
ATOM 15 C2 C A2023 38.576 115.528 107.560 1.00 35.04 C
ATOM 16 O2 C A2023 38.435 114.341 107.920 1.00 35.25 O
ATOM 17 N3 C A2023 39.471 116.347 108.159 1.00 36.62 N
ATOM 18 C4 C A2023 39.584 117.617 107.763 1.00 34.03 C
ATOM 19 N4 C A2023 40.495 118.381 108.371 1.00 34.63 N
ATOM 20 C5 C A2023 38.775 118.159 106.729 1.00 32.94 C
ATOM 21 C6 C A2023 37.896 117.345 106.140 1.00 32.46 C
ATOM 22 P U A2024 32.295 115.924 107.407 1.00 37.51 P
ATOM 23 OP1 U A2024 30.931 115.443 107.035 1.00 39.09 O
ATOM 24 OP2 U A2024 32.554 117.380 107.526 1.00 37.68 O
ATOM 25 O5' U A2024 32.718 115.229 108.772 1.00 35.27 O
TER
ATOM 1 O3' G B2021 40.373 123.537 107.399 1.00 36.86 O
ATOM 2 P U B2022 40.282 122.021 106.877 1.00 35.36 P
ATOM 3 OP1 U B2022 39.909 121.168 108.030 1.00 34.35 O
ATOM 4 OP2 U B2022 41.517 121.726 106.124 1.00 37.44 O
ATOM 5 O5' U B2022 39.082 122.036 105.831 1.00 36.11 O
ATOM 6 C5' U B2022 37.784 122.505 106.206 1.00 34.87 C
ATOM 7 C4' U B2022 36.813 122.330 105.064 1.00 36.30 C
ATOM 8 O4' U B2022 37.187 123.212 103.965 1.00 39.04 O
ATOM 9 C3' U B2022 36.721 120.926 104.470 1.00 36.67 C
ATOM 10 O3' U B2022 35.377 120.667 104.084 1.00 36.59 O
ATOM 11 C2' U B2022 37.604 121.027 103.230 1.00 36.10 C
ATOM 12 O2' U B2022 37.257 120.142 102.184 1.00 37.89 O
ATOM 13 C1' U B2022 37.319 122.452 102.779 1.00 37.08 C
ATOM 14 N1 U B2022 38.415 122.994 101.964 1.00 37.40 N
ATOM 15 C2 U B2022 38.128 123.314 100.644 1.00 37.08 C
ATOM 16 O2 U B2022 37.014 123.218 100.166 1.00 36.43 O
ATOM 17 N3 U B2022 39.198 123.753 99.905 1.00 37.05 N
ATOM 18 C4 U B2022 40.500 123.912 100.339 1.00 35.38 C
ATOM 19 O4 U B2022 41.370 124.220 99.523 1.00 35.34 O
ATOM 20 C5 U B2022 40.714 123.596 101.722 1.00 35.24 C
ATOM 21 C6 U B2022 39.689 123.158 102.472 1.00 35.88 C
ATOM 22 P C B2023 34.419 119.828 105.064 1.00 36.22 P
ATOM 23 OP1 C B2023 33.067 119.797 104.455 1.00 37.25 O
ATOM 24 OP2 C B2023 34.592 120.401 106.423 1.00 36.49 O
ATOM 25 O5' C B2023 35.037 118.359 105.070 1.00 33.99 O
TER
ATOM 2 P C A2023 34.419 119.828 105.064 1.00 36.22 P
ATOM 3 OP1 C A2023 33.067 119.797 104.455 1.00 37.25 O
ATOM 4 OP2 C A2023 34.592 120.401 106.423 1.00 36.49 O
ATOM 5 O5' C A2023 35.037 118.359 105.070 1.00 33.99 O
ATOM 6 C5' C A2023 34.511 117.319 104.223 1.00 33.31 C
ATOM 7 C4' C A2023 34.931 115.960 104.742 1.00 32.66 C
ATOM 8 O4' C A2023 36.372 115.806 104.650 1.00 32.95 O
ATOM 9 C3' C A2023 34.610 115.739 106.208 1.00 33.01 C
ATOM 10 O3' C A2023 33.282 115.265 106.331 1.00 34.33 O
ATOM 11 C2' C A2023 35.637 114.697 106.625 1.00 32.79 C
ATOM 12 O2' C A2023 35.264 113.389 106.243 1.00 32.85 O
ATOM 13 C1' C A2023 36.855 115.130 105.803 1.00 32.78 C
ATOM 14 N1 C A2023 37.785 116.034 106.512 1.00 32.79 N
ATOM 15 C2 C A2023 38.576 115.528 107.560 1.00 35.04 C
ATOM 16 O2 C A2023 38.435 114.341 107.920 1.00 35.25 O
ATOM 17 N3 C A2023 39.471 116.347 108.159 1.00 36.62 N
ATOM 18 C4 C A2023 39.584 117.617 107.763 1.00 34.03 C
ATOM 19 N4 C A2023 40.495 118.381 108.371 1.00 34.63 N
ATOM 20 C5 C A2023 38.775 118.159 106.729 1.00 32.94 C
ATOM 21 C6 C A2023 37.896 117.345 106.140 1.00 32.46 C
ATOM 22 P U A2024 32.295 115.924 107.407 1.00 37.51 P
ATOM 23 OP1 U A2024 30.931 115.443 107.035 1.00 39.09 O
ATOM 24 OP2 U A2024 32.554 117.380 107.526 1.00 37.68 O
ATOM 25 O5' U A2024 32.718 115.229 108.772 1.00 35.27 O
TER
ATOM 1 O3' G B2021 40.373 123.537 107.399 1.00 36.86 O
ATOM 2 P U B2022 40.282 122.021 106.877 1.00 35.36 P
ATOM 3 OP1 U B2022 39.909 121.168 108.030 1.00 34.35 O
ATOM 4 OP2 U B2022 41.517 121.726 106.124 1.00 37.44 O
ATOM 5 O5' U B2022 39.082 122.036 105.831 1.00 36.11 O
ATOM 6 C5' U B2022 37.784 122.505 106.206 1.00 34.87 C
ATOM 7 C4' U B2022 36.813 122.330 105.064 1.00 36.30 C
ATOM 8 O4' U B2022 37.187 123.212 103.965 1.00 39.04 O
ATOM 9 C3' U B2022 36.721 120.926 104.470 1.00 36.67 C
ATOM 10 O3' U B2022 35.377 120.667 104.084 1.00 36.59 O
ATOM 11 C2' U B2022 37.604 121.027 103.230 1.00 36.10 C
ATOM 12 O2' U B2022 37.257 120.142 102.184 1.00 37.89 O
ATOM 13 C1' U B2022 37.319 122.452 102.779 1.00 37.08 C
ATOM 14 N1 U B2022 38.415 122.994 101.964 1.00 37.40 N
ATOM 15 C2 U B2022 38.128 123.314 100.644 1.00 37.08 C
ATOM 16 O2 U B2022 37.014 123.218 100.166 1.00 36.43 O
ATOM 17 N3 U B2022 39.198 123.753 99.905 1.00 37.05 N
ATOM 18 C4 U B2022 40.500 123.912 100.339 1.00 35.38 C
ATOM 19 O4 U B2022 41.370 124.220 99.523 1.00 35.34 O
ATOM 20 C5 U B2022 40.714 123.596 101.722 1.00 35.24 C
ATOM 21 C6 U B2022 39.689 123.158 102.472 1.00 35.88 C
ATOM 22 P C B2023 34.419 119.828 105.064 1.00 36.22 P
ATOM 23 OP1 C B2023 33.067 119.797 104.455 1.00 37.25 O
ATOM 24 OP2 C B2023 34.592 120.401 106.423 1.00 36.49 O
ATOM 25 O5' C B2023 35.037 118.359 105.070 1.00 33.99 O
TER
Atoms:
C2: (38.576,115.528,107.560)
OP1: (33.067,119.797,104.455)
OP2: (34.592,120.401,106.423)
C4: (39.584,117.617,107.763)
O5': (35.037,118.359,105.070)
C3': (34.610,115.739,106.208)
C1': (36.855,115.130,105.803)
O4': (36.372,115.806,104.650)
C5': (34.511,117.319,104.223)
P: (34.419,119.828,105.064)
O2: (38.435,114.341,107.920)
C4': (34.931,115.960,104.742)
C2': (35.637,114.697,106.625)
O2': (35.264,113.389,106.243)
N1: (37.785,116.034,106.512)
N3: (39.471,116.347,108.159)
N4: (40.495,118.381,108.371)
C6: (37.896,117.345,106.140)
C5: (38.775,118.159,106.729)
O3': (33.282,115.265,106.331)
OP1: (33.067,119.797,104.455)
OP2: (34.592,120.401,106.423)
C4: (39.584,117.617,107.763)
O5': (35.037,118.359,105.070)
C3': (34.610,115.739,106.208)
C1': (36.855,115.130,105.803)
O4': (36.372,115.806,104.650)
C5': (34.511,117.319,104.223)
P: (34.419,119.828,105.064)
O2: (38.435,114.341,107.920)
C4': (34.931,115.960,104.742)
C2': (35.637,114.697,106.625)
O2': (35.264,113.389,106.243)
N1: (37.785,116.034,106.512)
N3: (39.471,116.347,108.159)
N4: (40.495,118.381,108.371)
C6: (37.896,117.345,106.140)
C5: (38.775,118.159,106.729)
O3': (33.282,115.265,106.331)
C4: (40.500,123.912,100.339)
N3: (39.198,123.753,99.905)
OP1: (39.909,121.168,108.030)
OP2: (41.517,121.726,106.124)
C2: (38.128,123.314,100.644)
C1': (37.319,122.452,102.779)
C3': (36.721,120.926,104.470)
O5': (39.082,122.036,105.831)
O4': (37.187,123.212,103.965)
C5': (37.784,122.505,106.206)
P: (40.282,122.021,106.877)
C4': (36.813,122.330,105.064)
C2': (37.604,121.027,103.230)
O2': (37.257,120.142,102.184)
N1: (38.415,122.994,101.964)
O4: (41.370,124.220,99.523)
O2: (37.014,123.218,100.166)
C6: (39.689,123.158,102.472)
C5: (40.714,123.596,101.722)
O3': (35.377,120.667,104.084)
N3: (39.198,123.753,99.905)
OP1: (39.909,121.168,108.030)
OP2: (41.517,121.726,106.124)
C2: (38.128,123.314,100.644)
C1': (37.319,122.452,102.779)
C3': (36.721,120.926,104.470)
O5': (39.082,122.036,105.831)
O4': (37.187,123.212,103.965)
C5': (37.784,122.505,106.206)
P: (40.282,122.021,106.877)
C4': (36.813,122.330,105.064)
C2': (37.604,121.027,103.230)
O2': (37.257,120.142,102.184)
N1: (38.415,122.994,101.964)
O4: (41.370,124.220,99.523)
O2: (37.014,123.218,100.166)
C6: (39.689,123.158,102.472)
C5: (40.714,123.596,101.722)
O3': (35.377,120.667,104.084)
Image (generated by PyMOL):