Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.752 104.521 117.320 1.00 48.17 O
ATOM 2 P C A1088 44.845 104.758 118.906 1.00 51.20 P
ATOM 3 OP1 C A1088 44.282 106.110 119.218 1.00 50.43 O
ATOM 4 OP2 C A1088 46.243 104.436 119.313 1.00 51.52 O
ATOM 5 O5' C A1088 43.899 103.622 119.503 1.00 50.47 O
ATOM 6 C5' C A1088 42.595 103.927 120.039 1.00 50.55 C
ATOM 7 C4' C A1088 42.006 102.696 120.692 1.00 50.73 C
ATOM 8 O4' C A1088 41.813 101.670 119.681 1.00 48.80 O
ATOM 9 C3' C A1088 42.894 102.035 121.739 1.00 50.84 C
ATOM 10 O3' C A1088 42.751 102.652 123.022 1.00 48.93 O
ATOM 11 C2' C A1088 42.394 100.590 121.732 1.00 51.36 C
ATOM 12 O2' C A1088 41.239 100.379 122.526 1.00 52.40 O
ATOM 13 C1' C A1088 42.045 100.390 120.250 1.00 49.61 C
ATOM 14 N1 C A1088 43.079 99.690 119.462 1.00 49.75 N
ATOM 15 C2 C A1088 43.341 98.340 119.740 1.00 49.91 C
ATOM 16 O2 C A1088 42.682 97.765 120.620 1.00 54.97 O
ATOM 17 N3 C A1088 44.299 97.694 119.042 1.00 48.04 N
ATOM 18 C4 C A1088 44.980 98.333 118.094 1.00 46.61 C
ATOM 19 N4 C A1088 45.923 97.652 117.445 1.00 44.73 N
ATOM 20 C5 C A1088 44.727 99.699 117.774 1.00 47.09 C
ATOM 21 C6 C A1088 43.779 100.335 118.478 1.00 49.04 C
ATOM 22 P U A1089 43.945 103.561 123.621 1.00 52.78 P
ATOM 23 OP1 U A1089 43.512 104.016 124.972 1.00 52.46 O
ATOM 24 OP2 U A1089 44.312 104.571 122.588 1.00 52.63 O
ATOM 25 O5' U A1089 45.183 102.569 123.791 1.00 50.35 O
TER
ATOM 1 O3' C B1086 49.585 100.613 114.959 1.00 48.92 O
ATOM 2 P U B1087 48.379 100.245 115.961 1.00 49.39 P
ATOM 3 OP1 U B1087 48.936 100.209 117.333 1.00 51.37 O
ATOM 4 OP2 U B1087 47.662 99.055 115.434 1.00 46.06 O
ATOM 5 O5' U B1087 47.393 101.490 115.867 1.00 47.52 O
ATOM 6 C5' U B1087 47.824 102.800 116.242 1.00 45.85 C
ATOM 7 C4' U B1087 46.685 103.783 116.100 1.00 47.33 C
ATOM 8 O4' U B1087 46.386 103.991 114.686 1.00 47.40 O
ATOM 9 C3' U B1087 45.366 103.376 116.753 1.00 47.12 C
ATOM 10 O3' U B1087 44.752 104.521 117.320 1.00 48.17 O
ATOM 11 C2' U B1087 44.547 102.873 115.569 1.00 46.88 C
ATOM 12 O2' U B1087 43.155 102.960 115.777 1.00 47.05 O
ATOM 13 C1' U B1087 45.000 103.831 114.470 1.00 44.77 C
ATOM 14 N1 U B1087 44.791 103.355 113.093 1.00 43.79 N
ATOM 15 C2 U B1087 44.068 104.169 112.224 1.00 41.92 C
ATOM 16 O2 U B1087 43.605 105.245 112.539 1.00 43.57 O
ATOM 17 N3 U B1087 43.906 103.671 110.964 1.00 42.20 N
ATOM 18 C4 U B1087 44.367 102.475 110.480 1.00 43.85 C
ATOM 19 O4 U B1087 44.127 102.172 109.310 1.00 46.43 O
ATOM 20 C5 U B1087 45.104 101.685 111.427 1.00 43.95 C
ATOM 21 C6 U B1087 45.288 102.142 112.668 1.00 43.63 C
ATOM 22 P C B1088 44.845 104.758 118.906 1.00 51.20 P
ATOM 23 OP1 C B1088 44.282 106.110 119.218 1.00 50.43 O
ATOM 24 OP2 C B1088 46.243 104.436 119.313 1.00 51.52 O
ATOM 25 O5' C B1088 43.899 103.622 119.503 1.00 50.47 O
TER
ATOM 2 P C A1088 44.845 104.758 118.906 1.00 51.20 P
ATOM 3 OP1 C A1088 44.282 106.110 119.218 1.00 50.43 O
ATOM 4 OP2 C A1088 46.243 104.436 119.313 1.00 51.52 O
ATOM 5 O5' C A1088 43.899 103.622 119.503 1.00 50.47 O
ATOM 6 C5' C A1088 42.595 103.927 120.039 1.00 50.55 C
ATOM 7 C4' C A1088 42.006 102.696 120.692 1.00 50.73 C
ATOM 8 O4' C A1088 41.813 101.670 119.681 1.00 48.80 O
ATOM 9 C3' C A1088 42.894 102.035 121.739 1.00 50.84 C
ATOM 10 O3' C A1088 42.751 102.652 123.022 1.00 48.93 O
ATOM 11 C2' C A1088 42.394 100.590 121.732 1.00 51.36 C
ATOM 12 O2' C A1088 41.239 100.379 122.526 1.00 52.40 O
ATOM 13 C1' C A1088 42.045 100.390 120.250 1.00 49.61 C
ATOM 14 N1 C A1088 43.079 99.690 119.462 1.00 49.75 N
ATOM 15 C2 C A1088 43.341 98.340 119.740 1.00 49.91 C
ATOM 16 O2 C A1088 42.682 97.765 120.620 1.00 54.97 O
ATOM 17 N3 C A1088 44.299 97.694 119.042 1.00 48.04 N
ATOM 18 C4 C A1088 44.980 98.333 118.094 1.00 46.61 C
ATOM 19 N4 C A1088 45.923 97.652 117.445 1.00 44.73 N
ATOM 20 C5 C A1088 44.727 99.699 117.774 1.00 47.09 C
ATOM 21 C6 C A1088 43.779 100.335 118.478 1.00 49.04 C
ATOM 22 P U A1089 43.945 103.561 123.621 1.00 52.78 P
ATOM 23 OP1 U A1089 43.512 104.016 124.972 1.00 52.46 O
ATOM 24 OP2 U A1089 44.312 104.571 122.588 1.00 52.63 O
ATOM 25 O5' U A1089 45.183 102.569 123.791 1.00 50.35 O
TER
ATOM 1 O3' C B1086 49.585 100.613 114.959 1.00 48.92 O
ATOM 2 P U B1087 48.379 100.245 115.961 1.00 49.39 P
ATOM 3 OP1 U B1087 48.936 100.209 117.333 1.00 51.37 O
ATOM 4 OP2 U B1087 47.662 99.055 115.434 1.00 46.06 O
ATOM 5 O5' U B1087 47.393 101.490 115.867 1.00 47.52 O
ATOM 6 C5' U B1087 47.824 102.800 116.242 1.00 45.85 C
ATOM 7 C4' U B1087 46.685 103.783 116.100 1.00 47.33 C
ATOM 8 O4' U B1087 46.386 103.991 114.686 1.00 47.40 O
ATOM 9 C3' U B1087 45.366 103.376 116.753 1.00 47.12 C
ATOM 10 O3' U B1087 44.752 104.521 117.320 1.00 48.17 O
ATOM 11 C2' U B1087 44.547 102.873 115.569 1.00 46.88 C
ATOM 12 O2' U B1087 43.155 102.960 115.777 1.00 47.05 O
ATOM 13 C1' U B1087 45.000 103.831 114.470 1.00 44.77 C
ATOM 14 N1 U B1087 44.791 103.355 113.093 1.00 43.79 N
ATOM 15 C2 U B1087 44.068 104.169 112.224 1.00 41.92 C
ATOM 16 O2 U B1087 43.605 105.245 112.539 1.00 43.57 O
ATOM 17 N3 U B1087 43.906 103.671 110.964 1.00 42.20 N
ATOM 18 C4 U B1087 44.367 102.475 110.480 1.00 43.85 C
ATOM 19 O4 U B1087 44.127 102.172 109.310 1.00 46.43 O
ATOM 20 C5 U B1087 45.104 101.685 111.427 1.00 43.95 C
ATOM 21 C6 U B1087 45.288 102.142 112.668 1.00 43.63 C
ATOM 22 P C B1088 44.845 104.758 118.906 1.00 51.20 P
ATOM 23 OP1 C B1088 44.282 106.110 119.218 1.00 50.43 O
ATOM 24 OP2 C B1088 46.243 104.436 119.313 1.00 51.52 O
ATOM 25 O5' C B1088 43.899 103.622 119.503 1.00 50.47 O
TER
Atoms:
C2: (43.341,98.340,119.740)
OP1: (44.282,106.110,119.218)
OP2: (46.243,104.436,119.313)
C4: (44.980,98.333,118.094)
O5': (43.899,103.622,119.503)
C3': (42.894,102.035,121.739)
C1': (42.045,100.390,120.250)
O4': (41.813,101.670,119.681)
C5': (42.595,103.927,120.039)
P: (44.845,104.758,118.906)
O2: (42.682,97.765,120.620)
C4': (42.006,102.696,120.692)
C2': (42.394,100.590,121.732)
O2': (41.239,100.379,122.526)
N1: (43.079,99.690,119.462)
N3: (44.299,97.694,119.042)
N4: (45.923,97.652,117.445)
C6: (43.779,100.335,118.478)
C5: (44.727,99.699,117.774)
O3': (42.751,102.652,123.022)
OP1: (44.282,106.110,119.218)
OP2: (46.243,104.436,119.313)
C4: (44.980,98.333,118.094)
O5': (43.899,103.622,119.503)
C3': (42.894,102.035,121.739)
C1': (42.045,100.390,120.250)
O4': (41.813,101.670,119.681)
C5': (42.595,103.927,120.039)
P: (44.845,104.758,118.906)
O2: (42.682,97.765,120.620)
C4': (42.006,102.696,120.692)
C2': (42.394,100.590,121.732)
O2': (41.239,100.379,122.526)
N1: (43.079,99.690,119.462)
N3: (44.299,97.694,119.042)
N4: (45.923,97.652,117.445)
C6: (43.779,100.335,118.478)
C5: (44.727,99.699,117.774)
O3': (42.751,102.652,123.022)
C4: (44.367,102.475,110.480)
N3: (43.906,103.671,110.964)
OP1: (48.936,100.209,117.333)
OP2: (47.662,99.055,115.434)
C2: (44.068,104.169,112.224)
C1': (45.000,103.831,114.470)
C3': (45.366,103.376,116.753)
O5': (47.393,101.490,115.867)
O4': (46.386,103.991,114.686)
C5': (47.824,102.800,116.242)
P: (48.379,100.245,115.961)
C4': (46.685,103.783,116.100)
C2': (44.547,102.873,115.569)
O2': (43.155,102.960,115.777)
N1: (44.791,103.355,113.093)
O4: (44.127,102.172,109.310)
O2: (43.605,105.245,112.539)
C6: (45.288,102.142,112.668)
C5: (45.104,101.685,111.427)
O3': (44.752,104.521,117.320)
N3: (43.906,103.671,110.964)
OP1: (48.936,100.209,117.333)
OP2: (47.662,99.055,115.434)
C2: (44.068,104.169,112.224)
C1': (45.000,103.831,114.470)
C3': (45.366,103.376,116.753)
O5': (47.393,101.490,115.867)
O4': (46.386,103.991,114.686)
C5': (47.824,102.800,116.242)
P: (48.379,100.245,115.961)
C4': (46.685,103.783,116.100)
C2': (44.547,102.873,115.569)
O2': (43.155,102.960,115.777)
N1: (44.791,103.355,113.093)
O4: (44.127,102.172,109.310)
O2: (43.605,105.245,112.539)
C6: (45.288,102.142,112.668)
C5: (45.104,101.685,111.427)
O3': (44.752,104.521,117.320)
Image (generated by PyMOL):