Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1491:A1490
Extra
PDB:
ATOM 1 O3' U A1490 -6.638 -1.205 45.369 1.00 16.11 O
ATOM 2 P C A1491 -7.153 -1.070 43.859 1.00 27.55 P
ATOM 3 OP1 C A1491 -6.022 -1.465 42.961 1.00 27.55 O
ATOM 4 OP2 C A1491 -7.737 0.292 43.722 1.00 27.55 O
ATOM 5 O5' C A1491 -8.323 -2.169 43.802 1.00 27.55 O
ATOM 6 C5' C A1491 -8.035 -3.535 43.515 1.00 27.55 C
ATOM 7 C4' C A1491 -9.292 -4.356 43.352 1.00 27.55 C
ATOM 8 O4' C A1491 -9.869 -4.603 44.650 1.00 27.55 O
ATOM 9 C3' C A1491 -10.423 -3.710 42.566 1.00 27.55 C
ATOM 10 O3' C A1491 -10.268 -3.811 41.173 1.00 27.55 O
ATOM 11 C2' C A1491 -11.653 -4.423 43.094 1.00 27.55 C
ATOM 12 O2' C A1491 -11.810 -5.698 42.484 1.00 27.55 O
ATOM 13 C1' C A1491 -11.274 -4.615 44.558 1.00 27.55 C
ATOM 14 N1 C A1491 -11.795 -3.538 45.403 1.00 27.69 N
ATOM 15 C2 C A1491 -13.040 -3.790 45.947 1.00 27.69 C
ATOM 16 O2 C A1491 -13.554 -4.871 45.649 1.00 27.69 O
ATOM 17 N3 C A1491 -13.622 -2.876 46.754 1.00 27.69 N
ATOM 18 C4 C A1491 -12.979 -1.746 47.013 1.00 27.69 C
ATOM 19 N4 C A1491 -13.619 -0.902 47.812 1.00 27.69 N
ATOM 20 C5 C A1491 -11.691 -1.447 46.467 1.00 27.69 C
ATOM 21 C6 C A1491 -11.127 -2.371 45.669 1.00 27.69 C
ATOM 22 P C A1492 -10.533 -2.521 40.264 1.00 9.33 P
ATOM 23 OP1 C A1492 -9.875 -2.767 38.924 1.00 9.33 O
ATOM 24 OP2 C A1492 -10.114 -1.335 41.065 1.00 9.33 O
ATOM 25 O5' C A1492 -12.116 -2.530 40.112 1.00 9.33 O
TER
ATOM 1 O3' A B1489 -10.025 -0.380 50.766 1.00 30.83 O
ATOM 2 P U B1490 -10.157 0.695 49.582 1.00 16.11 P
ATOM 3 OP1 U B1490 -9.675 1.985 50.094 1.00 16.11 O
ATOM 4 OP2 U B1490 -11.541 0.616 49.072 1.00 16.11 O
ATOM 5 O5' U B1490 -9.149 0.143 48.503 1.00 16.11 O
ATOM 6 C5' U B1490 -8.405 1.026 47.694 1.00 16.11 C
ATOM 7 C4' U B1490 -7.222 0.326 47.127 1.00 16.11 C
ATOM 8 O4' U B1490 -6.342 -0.033 48.225 1.00 16.11 O
ATOM 9 C3' U B1490 -7.558 -0.978 46.427 1.00 16.11 C
ATOM 10 O3' U B1490 -6.638 -1.205 45.369 1.00 16.11 O
ATOM 11 C2' U B1490 -7.374 -2.012 47.534 1.00 16.11 C
ATOM 12 O2' U B1490 -7.143 -3.336 47.096 1.00 16.11 O
ATOM 13 C1' U B1490 -6.182 -1.440 48.274 1.00 16.11 C
ATOM 14 N1 U B1490 -6.121 -1.838 49.674 1.00 16.18 N
ATOM 15 C2 U B1490 -5.013 -2.507 50.145 1.00 16.18 C
ATOM 16 O2 U B1490 -4.069 -2.781 49.431 1.00 16.18 O
ATOM 17 N3 U B1490 -5.062 -2.838 51.474 1.00 16.18 N
ATOM 18 C4 U B1490 -6.096 -2.552 52.348 1.00 16.18 C
ATOM 19 O4 U B1490 -6.048 -2.889 53.535 1.00 16.18 O
ATOM 20 C5 U B1490 -7.204 -1.860 51.764 1.00 16.18 C
ATOM 21 C6 U B1490 -7.182 -1.534 50.469 1.00 16.18 C
ATOM 22 P C B1491 -7.153 -1.070 43.859 1.00 27.55 P
ATOM 23 OP1 C B1491 -6.022 -1.465 42.961 1.00 27.55 O
ATOM 24 OP2 C B1491 -7.737 0.292 43.722 1.00 27.55 O
ATOM 25 O5' C B1491 -8.323 -2.169 43.802 1.00 27.55 O
TER
ATOM 2 P C A1491 -7.153 -1.070 43.859 1.00 27.55 P
ATOM 3 OP1 C A1491 -6.022 -1.465 42.961 1.00 27.55 O
ATOM 4 OP2 C A1491 -7.737 0.292 43.722 1.00 27.55 O
ATOM 5 O5' C A1491 -8.323 -2.169 43.802 1.00 27.55 O
ATOM 6 C5' C A1491 -8.035 -3.535 43.515 1.00 27.55 C
ATOM 7 C4' C A1491 -9.292 -4.356 43.352 1.00 27.55 C
ATOM 8 O4' C A1491 -9.869 -4.603 44.650 1.00 27.55 O
ATOM 9 C3' C A1491 -10.423 -3.710 42.566 1.00 27.55 C
ATOM 10 O3' C A1491 -10.268 -3.811 41.173 1.00 27.55 O
ATOM 11 C2' C A1491 -11.653 -4.423 43.094 1.00 27.55 C
ATOM 12 O2' C A1491 -11.810 -5.698 42.484 1.00 27.55 O
ATOM 13 C1' C A1491 -11.274 -4.615 44.558 1.00 27.55 C
ATOM 14 N1 C A1491 -11.795 -3.538 45.403 1.00 27.69 N
ATOM 15 C2 C A1491 -13.040 -3.790 45.947 1.00 27.69 C
ATOM 16 O2 C A1491 -13.554 -4.871 45.649 1.00 27.69 O
ATOM 17 N3 C A1491 -13.622 -2.876 46.754 1.00 27.69 N
ATOM 18 C4 C A1491 -12.979 -1.746 47.013 1.00 27.69 C
ATOM 19 N4 C A1491 -13.619 -0.902 47.812 1.00 27.69 N
ATOM 20 C5 C A1491 -11.691 -1.447 46.467 1.00 27.69 C
ATOM 21 C6 C A1491 -11.127 -2.371 45.669 1.00 27.69 C
ATOM 22 P C A1492 -10.533 -2.521 40.264 1.00 9.33 P
ATOM 23 OP1 C A1492 -9.875 -2.767 38.924 1.00 9.33 O
ATOM 24 OP2 C A1492 -10.114 -1.335 41.065 1.00 9.33 O
ATOM 25 O5' C A1492 -12.116 -2.530 40.112 1.00 9.33 O
TER
ATOM 1 O3' A B1489 -10.025 -0.380 50.766 1.00 30.83 O
ATOM 2 P U B1490 -10.157 0.695 49.582 1.00 16.11 P
ATOM 3 OP1 U B1490 -9.675 1.985 50.094 1.00 16.11 O
ATOM 4 OP2 U B1490 -11.541 0.616 49.072 1.00 16.11 O
ATOM 5 O5' U B1490 -9.149 0.143 48.503 1.00 16.11 O
ATOM 6 C5' U B1490 -8.405 1.026 47.694 1.00 16.11 C
ATOM 7 C4' U B1490 -7.222 0.326 47.127 1.00 16.11 C
ATOM 8 O4' U B1490 -6.342 -0.033 48.225 1.00 16.11 O
ATOM 9 C3' U B1490 -7.558 -0.978 46.427 1.00 16.11 C
ATOM 10 O3' U B1490 -6.638 -1.205 45.369 1.00 16.11 O
ATOM 11 C2' U B1490 -7.374 -2.012 47.534 1.00 16.11 C
ATOM 12 O2' U B1490 -7.143 -3.336 47.096 1.00 16.11 O
ATOM 13 C1' U B1490 -6.182 -1.440 48.274 1.00 16.11 C
ATOM 14 N1 U B1490 -6.121 -1.838 49.674 1.00 16.18 N
ATOM 15 C2 U B1490 -5.013 -2.507 50.145 1.00 16.18 C
ATOM 16 O2 U B1490 -4.069 -2.781 49.431 1.00 16.18 O
ATOM 17 N3 U B1490 -5.062 -2.838 51.474 1.00 16.18 N
ATOM 18 C4 U B1490 -6.096 -2.552 52.348 1.00 16.18 C
ATOM 19 O4 U B1490 -6.048 -2.889 53.535 1.00 16.18 O
ATOM 20 C5 U B1490 -7.204 -1.860 51.764 1.00 16.18 C
ATOM 21 C6 U B1490 -7.182 -1.534 50.469 1.00 16.18 C
ATOM 22 P C B1491 -7.153 -1.070 43.859 1.00 27.55 P
ATOM 23 OP1 C B1491 -6.022 -1.465 42.961 1.00 27.55 O
ATOM 24 OP2 C B1491 -7.737 0.292 43.722 1.00 27.55 O
ATOM 25 O5' C B1491 -8.323 -2.169 43.802 1.00 27.55 O
TER
Atoms:
C2: (-13.040,-3.790,45.947)
OP1: (-6.022,-1.465,42.961)
OP2: (-7.737,0.292,43.722)
C4: (-12.979,-1.746,47.013)
O5': (-8.323,-2.169,43.802)
C3': (-10.423,-3.710,42.566)
C1': (-11.274,-4.615,44.558)
O4': (-9.869,-4.603,44.650)
C5': (-8.035,-3.535,43.515)
P: (-7.153,-1.070,43.859)
O2: (-13.554,-4.871,45.649)
C4': (-9.292,-4.356,43.352)
C2': (-11.653,-4.423,43.094)
O2': (-11.810,-5.698,42.484)
N1: (-11.795,-3.538,45.403)
N3: (-13.622,-2.876,46.754)
N4: (-13.619,-0.902,47.812)
C6: (-11.127,-2.371,45.669)
C5: (-11.691,-1.447,46.467)
O3': (-10.268,-3.811,41.173)
OP1: (-6.022,-1.465,42.961)
OP2: (-7.737,0.292,43.722)
C4: (-12.979,-1.746,47.013)
O5': (-8.323,-2.169,43.802)
C3': (-10.423,-3.710,42.566)
C1': (-11.274,-4.615,44.558)
O4': (-9.869,-4.603,44.650)
C5': (-8.035,-3.535,43.515)
P: (-7.153,-1.070,43.859)
O2: (-13.554,-4.871,45.649)
C4': (-9.292,-4.356,43.352)
C2': (-11.653,-4.423,43.094)
O2': (-11.810,-5.698,42.484)
N1: (-11.795,-3.538,45.403)
N3: (-13.622,-2.876,46.754)
N4: (-13.619,-0.902,47.812)
C6: (-11.127,-2.371,45.669)
C5: (-11.691,-1.447,46.467)
O3': (-10.268,-3.811,41.173)
C4: (-6.096,-2.552,52.348)
N3: (-5.062,-2.838,51.474)
OP1: (-9.675,1.985,50.094)
OP2: (-11.541,0.616,49.072)
C2: (-5.013,-2.507,50.145)
C1': (-6.182,-1.440,48.274)
C3': (-7.558,-0.978,46.427)
O5': (-9.149,0.143,48.503)
O4': (-6.342,-0.033,48.225)
C5': (-8.405,1.026,47.694)
P: (-10.157,0.695,49.582)
C4': (-7.222,0.326,47.127)
C2': (-7.374,-2.012,47.534)
O2': (-7.143,-3.336,47.096)
N1: (-6.121,-1.838,49.674)
O4: (-6.048,-2.889,53.535)
O2: (-4.069,-2.781,49.431)
C6: (-7.182,-1.534,50.469)
C5: (-7.204,-1.860,51.764)
O3': (-6.638,-1.205,45.369)
N3: (-5.062,-2.838,51.474)
OP1: (-9.675,1.985,50.094)
OP2: (-11.541,0.616,49.072)
C2: (-5.013,-2.507,50.145)
C1': (-6.182,-1.440,48.274)
C3': (-7.558,-0.978,46.427)
O5': (-9.149,0.143,48.503)
O4': (-6.342,-0.033,48.225)
C5': (-8.405,1.026,47.694)
P: (-10.157,0.695,49.582)
C4': (-7.222,0.326,47.127)
C2': (-7.374,-2.012,47.534)
O2': (-7.143,-3.336,47.096)
N1: (-6.121,-1.838,49.674)
O4: (-6.048,-2.889,53.535)
O2: (-4.069,-2.781,49.431)
C6: (-7.182,-1.534,50.469)
C5: (-7.204,-1.860,51.764)
O3': (-6.638,-1.205,45.369)
Image (generated by PyMOL):