Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OIJ:C6:C5
Extra
PDB:
ATOM 1 O3' U A 5 19.640 -11.713 20.109 1.00 49.22 O
ATOM 2 P C A 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 3 OP1 C A 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 4 OP2 C A 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 5 O5' C A 6 18.562 -11.629 17.920 1.00 42.94 O
ATOM 6 C5' C A 6 17.769 -11.130 16.852 1.00 52.28 C
ATOM 7 C4' C A 6 17.616 -12.092 15.703 1.00 49.67 C
ATOM 8 O4' C A 6 18.898 -12.324 15.083 1.00 46.21 O
ATOM 9 C3' C A 6 17.082 -13.481 16.021 1.00 55.00 C
ATOM 10 O3' C A 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 11 C2' C A 6 17.638 -14.343 14.891 1.00 52.54 C
ATOM 12 O2' C A 6 16.794 -14.280 13.751 1.00 49.52 O
ATOM 13 C1' C A 6 18.951 -13.637 14.557 1.00 54.73 C
ATOM 14 N1 C A 6 20.157 -14.242 15.138 1.00 59.22 N
ATOM 15 C2 C A 6 21.343 -14.185 14.395 1.00 53.53 C
ATOM 16 O2 C A 6 21.333 -13.663 13.272 1.00 43.69 O
ATOM 17 N3 C A 6 22.471 -14.705 14.921 1.00 58.46 N
ATOM 18 C4 C A 6 22.439 -15.257 16.140 1.00 63.92 C
ATOM 19 N4 C A 6 23.576 -15.769 16.627 1.00 60.85 N
ATOM 20 C5 C A 6 21.240 -15.320 16.918 1.00 64.58 C
ATOM 21 C6 C A 6 20.129 -14.800 16.385 1.00 64.03 C
ATOM 22 P A A 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 23 OP1 A A 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 24 OP2 A A 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 25 O5' A A 7 13.379 -14.181 16.592 1.00 60.99 O
TER
ATOM 1 O3' U B 4 21.810 -16.796 19.822 1.00 58.37 O
ATOM 2 P U B 5 23.076 -16.195 20.591 1.00 55.33 P
ATOM 3 OP1 U B 5 24.120 -15.859 19.589 1.00 45.01 O
ATOM 4 OP2 U B 5 23.403 -17.081 21.755 1.00 57.73 O
ATOM 5 O5' U B 5 22.385 -14.861 21.056 1.00 69.65 O
ATOM 6 C5' U B 5 21.886 -13.945 20.101 1.00 58.30 C
ATOM 7 C4' U B 5 21.735 -12.614 20.766 1.00 51.43 C
ATOM 8 O4' U B 5 23.024 -12.069 21.104 1.00 46.88 O
ATOM 9 C3' U B 5 21.037 -11.506 20.010 1.00 49.62 C
ATOM 10 O3' U B 5 19.640 -11.713 20.109 1.00 49.22 O
ATOM 11 C2' U B 5 21.522 -10.249 20.733 1.00 46.80 C
ATOM 12 O2' U B 5 20.615 -9.874 21.753 1.00 57.41 O
ATOM 13 C1' U B 5 22.825 -10.708 21.398 1.00 47.48 C
ATOM 14 N1 U B 5 24.032 -9.869 21.289 1.00 49.18 N
ATOM 15 C2 U B 5 24.632 -9.714 20.078 1.00 50.31 C
ATOM 16 O2 U B 5 24.188 -10.255 19.083 1.00 47.34 O
ATOM 17 N3 U B 5 25.743 -8.898 20.101 1.00 54.77 N
ATOM 18 C4 U B 5 26.298 -8.253 21.189 1.00 56.51 C
ATOM 19 O4 U B 5 27.306 -7.554 21.068 1.00 57.81 O
ATOM 20 C5 U B 5 25.606 -8.484 22.409 1.00 58.29 C
ATOM 21 C6 U B 5 24.530 -9.265 22.415 1.00 53.42 C
ATOM 22 P C B 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 23 OP1 C B 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 24 OP2 C B 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 25 O5' C B 6 18.562 -11.629 17.920 1.00 42.94 O
TER
ATOM 2 P C A 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 3 OP1 C A 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 4 OP2 C A 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 5 O5' C A 6 18.562 -11.629 17.920 1.00 42.94 O
ATOM 6 C5' C A 6 17.769 -11.130 16.852 1.00 52.28 C
ATOM 7 C4' C A 6 17.616 -12.092 15.703 1.00 49.67 C
ATOM 8 O4' C A 6 18.898 -12.324 15.083 1.00 46.21 O
ATOM 9 C3' C A 6 17.082 -13.481 16.021 1.00 55.00 C
ATOM 10 O3' C A 6 15.666 -13.497 16.080 1.00 57.39 O
ATOM 11 C2' C A 6 17.638 -14.343 14.891 1.00 52.54 C
ATOM 12 O2' C A 6 16.794 -14.280 13.751 1.00 49.52 O
ATOM 13 C1' C A 6 18.951 -13.637 14.557 1.00 54.73 C
ATOM 14 N1 C A 6 20.157 -14.242 15.138 1.00 59.22 N
ATOM 15 C2 C A 6 21.343 -14.185 14.395 1.00 53.53 C
ATOM 16 O2 C A 6 21.333 -13.663 13.272 1.00 43.69 O
ATOM 17 N3 C A 6 22.471 -14.705 14.921 1.00 58.46 N
ATOM 18 C4 C A 6 22.439 -15.257 16.140 1.00 63.92 C
ATOM 19 N4 C A 6 23.576 -15.769 16.627 1.00 60.85 N
ATOM 20 C5 C A 6 21.240 -15.320 16.918 1.00 64.58 C
ATOM 21 C6 C A 6 20.129 -14.800 16.385 1.00 64.03 C
ATOM 22 P A A 7 14.861 -14.698 16.772 1.00 61.69 P
ATOM 23 OP1 A A 7 15.296 -14.763 18.196 1.00 74.92 O
ATOM 24 OP2 A A 7 15.008 -15.896 15.907 1.00 62.02 O
ATOM 25 O5' A A 7 13.379 -14.181 16.592 1.00 60.99 O
TER
ATOM 1 O3' U B 4 21.810 -16.796 19.822 1.00 58.37 O
ATOM 2 P U B 5 23.076 -16.195 20.591 1.00 55.33 P
ATOM 3 OP1 U B 5 24.120 -15.859 19.589 1.00 45.01 O
ATOM 4 OP2 U B 5 23.403 -17.081 21.755 1.00 57.73 O
ATOM 5 O5' U B 5 22.385 -14.861 21.056 1.00 69.65 O
ATOM 6 C5' U B 5 21.886 -13.945 20.101 1.00 58.30 C
ATOM 7 C4' U B 5 21.735 -12.614 20.766 1.00 51.43 C
ATOM 8 O4' U B 5 23.024 -12.069 21.104 1.00 46.88 O
ATOM 9 C3' U B 5 21.037 -11.506 20.010 1.00 49.62 C
ATOM 10 O3' U B 5 19.640 -11.713 20.109 1.00 49.22 O
ATOM 11 C2' U B 5 21.522 -10.249 20.733 1.00 46.80 C
ATOM 12 O2' U B 5 20.615 -9.874 21.753 1.00 57.41 O
ATOM 13 C1' U B 5 22.825 -10.708 21.398 1.00 47.48 C
ATOM 14 N1 U B 5 24.032 -9.869 21.289 1.00 49.18 N
ATOM 15 C2 U B 5 24.632 -9.714 20.078 1.00 50.31 C
ATOM 16 O2 U B 5 24.188 -10.255 19.083 1.00 47.34 O
ATOM 17 N3 U B 5 25.743 -8.898 20.101 1.00 54.77 N
ATOM 18 C4 U B 5 26.298 -8.253 21.189 1.00 56.51 C
ATOM 19 O4 U B 5 27.306 -7.554 21.068 1.00 57.81 O
ATOM 20 C5 U B 5 25.606 -8.484 22.409 1.00 58.29 C
ATOM 21 C6 U B 5 24.530 -9.265 22.415 1.00 53.42 C
ATOM 22 P C B 6 18.535 -10.870 19.331 1.00 54.61 P
ATOM 23 OP1 C B 6 19.091 -9.493 19.256 1.00 53.78 O
ATOM 24 OP2 C B 6 17.221 -11.064 20.013 1.00 64.72 O
ATOM 25 O5' C B 6 18.562 -11.629 17.920 1.00 42.94 O
TER
Atoms:
C2: (21.343,-14.185,14.395)
OP1: (19.091,-9.493,19.256)
OP2: (17.221,-11.064,20.013)
C4: (22.439,-15.257,16.140)
O5': (18.562,-11.629,17.920)
C3': (17.082,-13.481,16.021)
C1': (18.951,-13.637,14.557)
O4': (18.898,-12.324,15.083)
C5': (17.769,-11.130,16.852)
P: (18.535,-10.870,19.331)
O2: (21.333,-13.663,13.272)
C4': (17.616,-12.092,15.703)
C2': (17.638,-14.343,14.891)
O2': (16.794,-14.280,13.751)
N1: (20.157,-14.242,15.138)
N3: (22.471,-14.705,14.921)
N4: (23.576,-15.769,16.627)
C6: (20.129,-14.800,16.385)
C5: (21.240,-15.320,16.918)
O3': (15.666,-13.497,16.080)
OP1: (19.091,-9.493,19.256)
OP2: (17.221,-11.064,20.013)
C4: (22.439,-15.257,16.140)
O5': (18.562,-11.629,17.920)
C3': (17.082,-13.481,16.021)
C1': (18.951,-13.637,14.557)
O4': (18.898,-12.324,15.083)
C5': (17.769,-11.130,16.852)
P: (18.535,-10.870,19.331)
O2: (21.333,-13.663,13.272)
C4': (17.616,-12.092,15.703)
C2': (17.638,-14.343,14.891)
O2': (16.794,-14.280,13.751)
N1: (20.157,-14.242,15.138)
N3: (22.471,-14.705,14.921)
N4: (23.576,-15.769,16.627)
C6: (20.129,-14.800,16.385)
C5: (21.240,-15.320,16.918)
O3': (15.666,-13.497,16.080)
C4: (26.298,-8.253,21.189)
N3: (25.743,-8.898,20.101)
OP1: (24.120,-15.859,19.589)
OP2: (23.403,-17.081,21.755)
C2: (24.632,-9.714,20.078)
C1': (22.825,-10.708,21.398)
C3': (21.037,-11.506,20.010)
O5': (22.385,-14.861,21.056)
O4': (23.024,-12.069,21.104)
C5': (21.886,-13.945,20.101)
P: (23.076,-16.195,20.591)
C4': (21.735,-12.614,20.766)
C2': (21.522,-10.249,20.733)
O2': (20.615,-9.874,21.753)
N1: (24.032,-9.869,21.289)
O4: (27.306,-7.554,21.068)
O2: (24.188,-10.255,19.083)
C6: (24.530,-9.265,22.415)
C5: (25.606,-8.484,22.409)
O3': (19.640,-11.713,20.109)
N3: (25.743,-8.898,20.101)
OP1: (24.120,-15.859,19.589)
OP2: (23.403,-17.081,21.755)
C2: (24.632,-9.714,20.078)
C1': (22.825,-10.708,21.398)
C3': (21.037,-11.506,20.010)
O5': (22.385,-14.861,21.056)
O4': (23.024,-12.069,21.104)
C5': (21.886,-13.945,20.101)
P: (23.076,-16.195,20.591)
C4': (21.735,-12.614,20.766)
C2': (21.522,-10.249,20.733)
O2': (20.615,-9.874,21.753)
N1: (24.032,-9.869,21.289)
O4: (27.306,-7.554,21.068)
O2: (24.188,-10.255,19.083)
C6: (24.530,-9.265,22.415)
C5: (25.606,-8.484,22.409)
O3': (19.640,-11.713,20.109)
Image (generated by PyMOL):