Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 45.043 104.980 117.339 1.00 37.94 O
ATOM 2 P C A1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 3 OP1 C A1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 4 OP2 C A1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 5 O5' C A1088 44.113 104.123 119.527 1.00 40.69 O
ATOM 6 C5' C A1088 42.836 104.501 120.081 1.00 40.55 C
ATOM 7 C4' C A1088 42.188 103.312 120.750 1.00 41.54 C
ATOM 8 O4' C A1088 41.890 102.299 119.751 1.00 39.30 O
ATOM 9 C3' C A1088 43.051 102.597 121.781 1.00 41.62 C
ATOM 10 O3' C A1088 42.967 103.217 123.065 1.00 43.55 O
ATOM 11 C2' C A1088 42.439 101.202 121.795 1.00 41.90 C
ATOM 12 O2' C A1088 41.281 101.126 122.603 1.00 44.34 O
ATOM 13 C1' C A1088 42.060 101.011 120.318 1.00 38.84 C
ATOM 14 N1 C A1088 43.075 100.278 119.532 1.00 36.76 N
ATOM 15 C2 C A1088 43.312 98.931 119.828 1.00 34.96 C
ATOM 16 O2 C A1088 42.664 98.392 120.733 1.00 39.86 O
ATOM 17 N3 C A1088 44.243 98.251 119.126 1.00 35.40 N
ATOM 18 C4 C A1088 44.932 98.862 118.163 1.00 34.77 C
ATOM 19 N4 C A1088 45.853 98.151 117.510 1.00 33.06 N
ATOM 20 C5 C A1088 44.709 100.229 117.830 1.00 35.66 C
ATOM 21 C6 C A1088 43.780 100.894 118.534 1.00 36.62 C
ATOM 22 P U A1089 44.227 104.043 123.650 1.00 48.29 P
ATOM 23 OP1 U A1089 43.883 104.499 125.023 1.00 46.43 O
ATOM 24 OP2 U A1089 44.630 105.045 122.624 1.00 47.78 O
ATOM 25 O5' U A1089 45.393 102.968 123.771 1.00 46.72 O
TER
ATOM 1 O3' C B1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 2 P U B1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 3 OP1 U B1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 4 OP2 U B1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 5 O5' U B1087 47.584 101.819 115.888 1.00 35.74 O
ATOM 6 C5' U B1087 48.022 103.120 116.268 1.00 34.86 C
ATOM 7 C4' U B1087 46.908 104.122 116.105 1.00 36.78 C
ATOM 8 O4' U B1087 46.612 104.292 114.690 1.00 37.35 O
ATOM 9 C3' U B1087 45.582 103.791 116.785 1.00 36.94 C
ATOM 10 O3' U B1087 45.043 104.980 117.339 1.00 37.94 O
ATOM 11 C2' U B1087 44.712 103.322 115.620 1.00 37.22 C
ATOM 12 O2' U B1087 43.332 103.530 115.842 1.00 38.43 O
ATOM 13 C1' U B1087 45.217 104.225 114.497 1.00 34.70 C
ATOM 14 N1 U B1087 44.953 103.753 113.129 1.00 32.01 N
ATOM 15 C2 U B1087 44.246 104.597 112.281 1.00 31.36 C
ATOM 16 O2 U B1087 43.831 105.694 112.619 1.00 33.19 O
ATOM 17 N3 U B1087 44.040 104.108 111.020 1.00 29.78 N
ATOM 18 C4 U B1087 44.449 102.894 110.523 1.00 30.94 C
ATOM 19 O4 U B1087 44.174 102.600 109.361 1.00 31.77 O
ATOM 20 C5 U B1087 45.168 102.074 111.455 1.00 30.95 C
ATOM 21 C6 U B1087 45.390 102.521 112.694 1.00 32.21 C
ATOM 22 P C B1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 23 OP1 C B1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 24 OP2 C B1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 25 O5' C B1088 44.113 104.123 119.527 1.00 40.69 O
TER
ATOM 2 P C A1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 3 OP1 C A1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 4 OP2 C A1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 5 O5' C A1088 44.113 104.123 119.527 1.00 40.69 O
ATOM 6 C5' C A1088 42.836 104.501 120.081 1.00 40.55 C
ATOM 7 C4' C A1088 42.188 103.312 120.750 1.00 41.54 C
ATOM 8 O4' C A1088 41.890 102.299 119.751 1.00 39.30 O
ATOM 9 C3' C A1088 43.051 102.597 121.781 1.00 41.62 C
ATOM 10 O3' C A1088 42.967 103.217 123.065 1.00 43.55 O
ATOM 11 C2' C A1088 42.439 101.202 121.795 1.00 41.90 C
ATOM 12 O2' C A1088 41.281 101.126 122.603 1.00 44.34 O
ATOM 13 C1' C A1088 42.060 101.011 120.318 1.00 38.84 C
ATOM 14 N1 C A1088 43.075 100.278 119.532 1.00 36.76 N
ATOM 15 C2 C A1088 43.312 98.931 119.828 1.00 34.96 C
ATOM 16 O2 C A1088 42.664 98.392 120.733 1.00 39.86 O
ATOM 17 N3 C A1088 44.243 98.251 119.126 1.00 35.40 N
ATOM 18 C4 C A1088 44.932 98.862 118.163 1.00 34.77 C
ATOM 19 N4 C A1088 45.853 98.151 117.510 1.00 33.06 N
ATOM 20 C5 C A1088 44.709 100.229 117.830 1.00 35.66 C
ATOM 21 C6 C A1088 43.780 100.894 118.534 1.00 36.62 C
ATOM 22 P U A1089 44.227 104.043 123.650 1.00 48.29 P
ATOM 23 OP1 U A1089 43.883 104.499 125.023 1.00 46.43 O
ATOM 24 OP2 U A1089 44.630 105.045 122.624 1.00 47.78 O
ATOM 25 O5' U A1089 45.393 102.968 123.771 1.00 46.72 O
TER
ATOM 1 O3' C B1086 49.742 100.843 115.006 1.00 37.90 O
ATOM 2 P U B1087 48.549 100.564 116.046 1.00 37.14 P
ATOM 3 OP1 U B1087 49.126 100.605 117.409 1.00 37.57 O
ATOM 4 OP2 U B1087 47.827 99.350 115.594 1.00 34.97 O
ATOM 5 O5' U B1087 47.584 101.819 115.888 1.00 35.74 O
ATOM 6 C5' U B1087 48.022 103.120 116.268 1.00 34.86 C
ATOM 7 C4' U B1087 46.908 104.122 116.105 1.00 36.78 C
ATOM 8 O4' U B1087 46.612 104.292 114.690 1.00 37.35 O
ATOM 9 C3' U B1087 45.582 103.791 116.785 1.00 36.94 C
ATOM 10 O3' U B1087 45.043 104.980 117.339 1.00 37.94 O
ATOM 11 C2' U B1087 44.712 103.322 115.620 1.00 37.22 C
ATOM 12 O2' U B1087 43.332 103.530 115.842 1.00 38.43 O
ATOM 13 C1' U B1087 45.217 104.225 114.497 1.00 34.70 C
ATOM 14 N1 U B1087 44.953 103.753 113.129 1.00 32.01 N
ATOM 15 C2 U B1087 44.246 104.597 112.281 1.00 31.36 C
ATOM 16 O2 U B1087 43.831 105.694 112.619 1.00 33.19 O
ATOM 17 N3 U B1087 44.040 104.108 111.020 1.00 29.78 N
ATOM 18 C4 U B1087 44.449 102.894 110.523 1.00 30.94 C
ATOM 19 O4 U B1087 44.174 102.600 109.361 1.00 31.77 O
ATOM 20 C5 U B1087 45.168 102.074 111.455 1.00 30.95 C
ATOM 21 C6 U B1087 45.390 102.521 112.694 1.00 32.21 C
ATOM 22 P C B1088 45.114 105.215 118.929 1.00 42.20 P
ATOM 23 OP1 C B1088 44.585 106.585 119.210 1.00 39.57 O
ATOM 24 OP2 C B1088 46.487 104.848 119.379 1.00 41.69 O
ATOM 25 O5' C B1088 44.113 104.123 119.527 1.00 40.69 O
TER
Atoms:
C2: (43.312,98.931,119.828)
OP1: (44.585,106.585,119.210)
OP2: (46.487,104.848,119.379)
C4: (44.932,98.862,118.163)
O5': (44.113,104.123,119.527)
C3': (43.051,102.597,121.781)
C1': (42.060,101.011,120.318)
O4': (41.890,102.299,119.751)
C5': (42.836,104.501,120.081)
P: (45.114,105.215,118.929)
O2: (42.664,98.392,120.733)
C4': (42.188,103.312,120.750)
C2': (42.439,101.202,121.795)
O2': (41.281,101.126,122.603)
N1: (43.075,100.278,119.532)
N3: (44.243,98.251,119.126)
N4: (45.853,98.151,117.510)
C6: (43.780,100.894,118.534)
C5: (44.709,100.229,117.830)
O3': (42.967,103.217,123.065)
OP1: (44.585,106.585,119.210)
OP2: (46.487,104.848,119.379)
C4: (44.932,98.862,118.163)
O5': (44.113,104.123,119.527)
C3': (43.051,102.597,121.781)
C1': (42.060,101.011,120.318)
O4': (41.890,102.299,119.751)
C5': (42.836,104.501,120.081)
P: (45.114,105.215,118.929)
O2: (42.664,98.392,120.733)
C4': (42.188,103.312,120.750)
C2': (42.439,101.202,121.795)
O2': (41.281,101.126,122.603)
N1: (43.075,100.278,119.532)
N3: (44.243,98.251,119.126)
N4: (45.853,98.151,117.510)
C6: (43.780,100.894,118.534)
C5: (44.709,100.229,117.830)
O3': (42.967,103.217,123.065)
C4: (44.449,102.894,110.523)
N3: (44.040,104.108,111.020)
OP1: (49.126,100.605,117.409)
OP2: (47.827,99.350,115.594)
C2: (44.246,104.597,112.281)
C1': (45.217,104.225,114.497)
C3': (45.582,103.791,116.785)
O5': (47.584,101.819,115.888)
O4': (46.612,104.292,114.690)
C5': (48.022,103.120,116.268)
P: (48.549,100.564,116.046)
C4': (46.908,104.122,116.105)
C2': (44.712,103.322,115.620)
O2': (43.332,103.530,115.842)
N1: (44.953,103.753,113.129)
O4: (44.174,102.600,109.361)
O2: (43.831,105.694,112.619)
C6: (45.390,102.521,112.694)
C5: (45.168,102.074,111.455)
O3': (45.043,104.980,117.339)
N3: (44.040,104.108,111.020)
OP1: (49.126,100.605,117.409)
OP2: (47.827,99.350,115.594)
C2: (44.246,104.597,112.281)
C1': (45.217,104.225,114.497)
C3': (45.582,103.791,116.785)
O5': (47.584,101.819,115.888)
O4': (46.612,104.292,114.690)
C5': (48.022,103.120,116.268)
P: (48.549,100.564,116.046)
C4': (46.908,104.122,116.105)
C2': (44.712,103.322,115.620)
O2': (43.332,103.530,115.842)
N1: (44.953,103.753,113.129)
O4: (44.174,102.600,109.361)
O2: (43.831,105.694,112.619)
C6: (45.390,102.521,112.694)
C5: (45.168,102.074,111.455)
O3': (45.043,104.980,117.339)
Image (generated by PyMOL):