Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.911 105.052 117.521 1.00 48.14 O
ATOM 2 P C A1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 3 OP1 C A1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 4 OP2 C A1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 5 O5' C A1088 44.061 104.165 119.719 1.00 49.92 O
ATOM 6 C5' C A1088 42.756 104.457 120.249 1.00 49.54 C
ATOM 7 C4' C A1088 42.180 103.229 120.908 1.00 49.65 C
ATOM 8 O4' C A1088 41.975 102.200 119.905 1.00 48.52 O
ATOM 9 C3' C A1088 43.079 102.577 121.950 1.00 50.19 C
ATOM 10 O3' C A1088 42.919 103.179 123.231 1.00 49.64 O
ATOM 11 C2' C A1088 42.584 101.136 121.956 1.00 51.02 C
ATOM 12 O2' C A1088 41.438 100.959 122.768 1.00 51.54 O
ATOM 13 C1' C A1088 42.225 100.926 120.478 1.00 50.44 C
ATOM 14 N1 C A1088 43.265 100.233 119.688 1.00 50.96 N
ATOM 15 C2 C A1088 43.474 98.861 119.906 1.00 50.17 C
ATOM 16 O2 C A1088 42.783 98.271 120.745 1.00 56.35 O
ATOM 17 N3 C A1088 44.417 98.213 119.200 1.00 48.34 N
ATOM 18 C4 C A1088 45.145 98.866 118.300 1.00 47.87 C
ATOM 19 N4 C A1088 46.076 98.173 117.643 1.00 45.56 N
ATOM 20 C5 C A1088 44.955 100.260 118.040 1.00 49.37 C
ATOM 21 C6 C A1088 44.014 100.900 118.755 1.00 50.83 C
ATOM 22 P U A1089 44.098 104.087 123.852 1.00 52.55 P
ATOM 23 OP1 U A1089 43.632 104.510 125.205 1.00 53.54 O
ATOM 24 OP2 U A1089 44.453 105.128 122.838 1.00 51.47 O
ATOM 25 O5' U A1089 45.343 103.099 124.013 1.00 49.87 O
TER
ATOM 1 O3' C B1086 49.714 101.137 115.162 1.00 48.09 O
ATOM 2 P U B1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 3 OP1 U B1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 4 OP2 U B1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 5 O5' U B1087 47.530 102.012 116.096 1.00 46.91 O
ATOM 6 C5' U B1087 47.988 103.318 116.462 1.00 47.65 C
ATOM 7 C4' U B1087 46.862 104.316 116.331 1.00 49.03 C
ATOM 8 O4' U B1087 46.569 104.541 114.920 1.00 50.06 O
ATOM 9 C3' U B1087 45.537 103.907 116.974 1.00 48.60 C
ATOM 10 O3' U B1087 44.911 105.052 117.521 1.00 48.14 O
ATOM 11 C2' U B1087 44.729 103.407 115.782 1.00 49.05 C
ATOM 12 O2' U B1087 43.333 103.475 115.964 1.00 50.57 O
ATOM 13 C1' U B1087 45.181 104.385 114.703 1.00 47.59 C
ATOM 14 N1 U B1087 44.956 103.937 113.321 1.00 45.62 N
ATOM 15 C2 U B1087 44.278 104.800 112.472 1.00 44.92 C
ATOM 16 O2 U B1087 43.885 105.905 112.812 1.00 47.68 O
ATOM 17 N3 U B1087 44.076 104.325 111.207 1.00 43.28 N
ATOM 18 C4 U B1087 44.469 103.111 110.706 1.00 42.98 C
ATOM 19 O4 U B1087 44.201 102.831 109.542 1.00 41.68 O
ATOM 20 C5 U B1087 45.175 102.276 111.635 1.00 44.56 C
ATOM 21 C6 U B1087 45.389 102.708 112.879 1.00 44.86 C
ATOM 22 P C B1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 23 OP1 C B1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 24 OP2 C B1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 25 O5' C B1088 44.061 104.165 119.719 1.00 49.92 O
TER
ATOM 2 P C A1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 3 OP1 C A1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 4 OP2 C A1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 5 O5' C A1088 44.061 104.165 119.719 1.00 49.92 O
ATOM 6 C5' C A1088 42.756 104.457 120.249 1.00 49.54 C
ATOM 7 C4' C A1088 42.180 103.229 120.908 1.00 49.65 C
ATOM 8 O4' C A1088 41.975 102.200 119.905 1.00 48.52 O
ATOM 9 C3' C A1088 43.079 102.577 121.950 1.00 50.19 C
ATOM 10 O3' C A1088 42.919 103.179 123.231 1.00 49.64 O
ATOM 11 C2' C A1088 42.584 101.136 121.956 1.00 51.02 C
ATOM 12 O2' C A1088 41.438 100.959 122.768 1.00 51.54 O
ATOM 13 C1' C A1088 42.225 100.926 120.478 1.00 50.44 C
ATOM 14 N1 C A1088 43.265 100.233 119.688 1.00 50.96 N
ATOM 15 C2 C A1088 43.474 98.861 119.906 1.00 50.17 C
ATOM 16 O2 C A1088 42.783 98.271 120.745 1.00 56.35 O
ATOM 17 N3 C A1088 44.417 98.213 119.200 1.00 48.34 N
ATOM 18 C4 C A1088 45.145 98.866 118.300 1.00 47.87 C
ATOM 19 N4 C A1088 46.076 98.173 117.643 1.00 45.56 N
ATOM 20 C5 C A1088 44.955 100.260 118.040 1.00 49.37 C
ATOM 21 C6 C A1088 44.014 100.900 118.755 1.00 50.83 C
ATOM 22 P U A1089 44.098 104.087 123.852 1.00 52.55 P
ATOM 23 OP1 U A1089 43.632 104.510 125.205 1.00 53.54 O
ATOM 24 OP2 U A1089 44.453 105.128 122.838 1.00 51.47 O
ATOM 25 O5' U A1089 45.343 103.099 124.013 1.00 49.87 O
TER
ATOM 1 O3' C B1086 49.714 101.137 115.162 1.00 48.09 O
ATOM 2 P U B1087 48.505 100.755 116.146 1.00 48.48 P
ATOM 3 OP1 U B1087 49.074 100.663 117.512 1.00 50.47 O
ATOM 4 OP2 U B1087 47.790 99.592 115.573 1.00 45.81 O
ATOM 5 O5' U B1087 47.530 102.012 116.096 1.00 46.91 O
ATOM 6 C5' U B1087 47.988 103.318 116.462 1.00 47.65 C
ATOM 7 C4' U B1087 46.862 104.316 116.331 1.00 49.03 C
ATOM 8 O4' U B1087 46.569 104.541 114.920 1.00 50.06 O
ATOM 9 C3' U B1087 45.537 103.907 116.974 1.00 48.60 C
ATOM 10 O3' U B1087 44.911 105.052 117.521 1.00 48.14 O
ATOM 11 C2' U B1087 44.729 103.407 115.782 1.00 49.05 C
ATOM 12 O2' U B1087 43.333 103.475 115.964 1.00 50.57 O
ATOM 13 C1' U B1087 45.181 104.385 114.703 1.00 47.59 C
ATOM 14 N1 U B1087 44.956 103.937 113.321 1.00 45.62 N
ATOM 15 C2 U B1087 44.278 104.800 112.472 1.00 44.92 C
ATOM 16 O2 U B1087 43.885 105.905 112.812 1.00 47.68 O
ATOM 17 N3 U B1087 44.076 104.325 111.207 1.00 43.28 N
ATOM 18 C4 U B1087 44.469 103.111 110.706 1.00 42.98 C
ATOM 19 O4 U B1087 44.201 102.831 109.542 1.00 41.68 O
ATOM 20 C5 U B1087 45.175 102.276 111.635 1.00 44.56 C
ATOM 21 C6 U B1087 45.389 102.708 112.879 1.00 44.86 C
ATOM 22 P C B1088 44.984 105.310 119.105 1.00 51.96 P
ATOM 23 OP1 C B1088 44.373 106.646 119.377 1.00 52.05 O
ATOM 24 OP2 C B1088 46.389 105.050 119.515 1.00 51.63 O
ATOM 25 O5' C B1088 44.061 104.165 119.719 1.00 49.92 O
TER
Atoms:
C2: (43.474,98.861,119.906)
OP1: (44.373,106.646,119.377)
OP2: (46.389,105.050,119.515)
C4: (45.145,98.866,118.300)
O5': (44.061,104.165,119.719)
C3': (43.079,102.577,121.950)
C1': (42.225,100.926,120.478)
O4': (41.975,102.200,119.905)
C5': (42.756,104.457,120.249)
P: (44.984,105.310,119.105)
O2: (42.783,98.271,120.745)
C4': (42.180,103.229,120.908)
C2': (42.584,101.136,121.956)
O2': (41.438,100.959,122.768)
N1: (43.265,100.233,119.688)
N3: (44.417,98.213,119.200)
N4: (46.076,98.173,117.643)
C6: (44.014,100.900,118.755)
C5: (44.955,100.260,118.040)
O3': (42.919,103.179,123.231)
OP1: (44.373,106.646,119.377)
OP2: (46.389,105.050,119.515)
C4: (45.145,98.866,118.300)
O5': (44.061,104.165,119.719)
C3': (43.079,102.577,121.950)
C1': (42.225,100.926,120.478)
O4': (41.975,102.200,119.905)
C5': (42.756,104.457,120.249)
P: (44.984,105.310,119.105)
O2: (42.783,98.271,120.745)
C4': (42.180,103.229,120.908)
C2': (42.584,101.136,121.956)
O2': (41.438,100.959,122.768)
N1: (43.265,100.233,119.688)
N3: (44.417,98.213,119.200)
N4: (46.076,98.173,117.643)
C6: (44.014,100.900,118.755)
C5: (44.955,100.260,118.040)
O3': (42.919,103.179,123.231)
C4: (44.469,103.111,110.706)
N3: (44.076,104.325,111.207)
OP1: (49.074,100.663,117.512)
OP2: (47.790,99.592,115.573)
C2: (44.278,104.800,112.472)
C1': (45.181,104.385,114.703)
C3': (45.537,103.907,116.974)
O5': (47.530,102.012,116.096)
O4': (46.569,104.541,114.920)
C5': (47.988,103.318,116.462)
P: (48.505,100.755,116.146)
C4': (46.862,104.316,116.331)
C2': (44.729,103.407,115.782)
O2': (43.333,103.475,115.964)
N1: (44.956,103.937,113.321)
O4: (44.201,102.831,109.542)
O2: (43.885,105.905,112.812)
C6: (45.389,102.708,112.879)
C5: (45.175,102.276,111.635)
O3': (44.911,105.052,117.521)
N3: (44.076,104.325,111.207)
OP1: (49.074,100.663,117.512)
OP2: (47.790,99.592,115.573)
C2: (44.278,104.800,112.472)
C1': (45.181,104.385,114.703)
C3': (45.537,103.907,116.974)
O5': (47.530,102.012,116.096)
O4': (46.569,104.541,114.920)
C5': (47.988,103.318,116.462)
P: (48.505,100.755,116.146)
C4': (46.862,104.316,116.331)
C2': (44.729,103.407,115.782)
O2': (43.333,103.475,115.964)
N1: (44.956,103.937,113.321)
O4: (44.201,102.831,109.542)
O2: (43.885,105.905,112.812)
C6: (45.389,102.708,112.879)
C5: (45.175,102.276,111.635)
O3': (44.911,105.052,117.521)
Image (generated by PyMOL):