Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:02023:02022
Extra
PDB:
ATOM 1 O3' U A2022 35.244 120.704 104.085 1.00 40.18 O
ATOM 2 P C A2023 34.340 119.793 105.047 1.00 38.16 P
ATOM 3 OP1 C A2023 32.982 119.770 104.485 1.00 38.21 O
ATOM 4 OP2 C A2023 34.553 120.288 106.427 1.00 40.58 O
ATOM 5 O5' C A2023 34.991 118.338 104.968 1.00 36.06 O
ATOM 6 C5' C A2023 34.431 117.308 104.137 1.00 34.84 C
ATOM 7 C4' C A2023 34.834 115.944 104.650 1.00 34.11 C
ATOM 8 O4' C A2023 36.271 115.756 104.537 1.00 33.30 O
ATOM 9 C3' C A2023 34.525 115.730 106.121 1.00 35.29 C
ATOM 10 O3' C A2023 33.196 115.267 106.261 1.00 37.65 O
ATOM 11 C2' C A2023 35.539 114.675 106.527 1.00 34.65 C
ATOM 12 O2' C A2023 35.129 113.381 106.143 1.00 34.03 O
ATOM 13 C1' C A2023 36.756 115.092 105.695 1.00 34.71 C
ATOM 14 N1 C A2023 37.681 116.005 106.399 1.00 35.78 N
ATOM 15 C2 C A2023 38.479 115.504 107.443 1.00 36.94 C
ATOM 16 O2 C A2023 38.337 114.321 107.804 1.00 34.94 O
ATOM 17 N3 C A2023 39.375 116.326 108.037 1.00 37.69 N
ATOM 18 C4 C A2023 39.473 117.601 107.647 1.00 36.75 C
ATOM 19 N4 C A2023 40.375 118.377 108.257 1.00 36.45 N
ATOM 20 C5 C A2023 38.652 118.139 106.618 1.00 33.57 C
ATOM 21 C6 C A2023 37.781 117.319 106.030 1.00 34.10 C
ATOM 22 P U A2024 32.219 115.954 107.330 1.00 41.27 P
ATOM 23 OP1 U A2024 30.847 115.506 106.949 1.00 42.82 O
ATOM 24 OP2 U A2024 32.516 117.406 107.431 1.00 40.61 O
ATOM 25 O5' U A2024 32.623 115.261 108.703 1.00 39.03 O
TER
ATOM 1 O3' G B2021 40.321 123.471 107.359 1.00 40.97 O
ATOM 2 P U B2022 40.164 121.965 106.830 1.00 39.92 P
ATOM 3 OP1 U B2022 39.756 121.130 107.980 1.00 41.74 O
ATOM 4 OP2 U B2022 41.385 121.616 106.081 1.00 40.82 O
ATOM 5 O5' U B2022 38.965 122.037 105.785 1.00 39.97 O
ATOM 6 C5' U B2022 37.686 122.564 106.151 1.00 38.03 C
ATOM 7 C4' U B2022 36.705 122.392 105.012 1.00 39.79 C
ATOM 8 O4' U B2022 37.086 123.249 103.892 1.00 40.75 O
ATOM 9 C3' U B2022 36.592 120.975 104.445 1.00 40.06 C
ATOM 10 O3' U B2022 35.244 120.704 104.085 1.00 40.18 O
ATOM 11 C2' U B2022 37.465 121.039 103.194 1.00 39.78 C
ATOM 12 O2' U B2022 37.106 120.133 102.169 1.00 41.72 O
ATOM 13 C1' U B2022 37.205 122.462 102.717 1.00 39.08 C
ATOM 14 N1 U B2022 38.311 122.971 101.893 1.00 38.05 N
ATOM 15 C2 U B2022 38.040 123.275 100.562 1.00 37.63 C
ATOM 16 O2 U B2022 36.934 123.182 100.069 1.00 35.99 O
ATOM 17 N3 U B2022 39.124 123.693 99.831 1.00 37.07 N
ATOM 18 C4 U B2022 40.418 123.841 100.277 1.00 35.10 C
ATOM 19 O4 U B2022 41.287 124.202 99.486 1.00 34.78 O
ATOM 20 C5 U B2022 40.614 123.544 101.668 1.00 33.42 C
ATOM 21 C6 U B2022 39.583 123.128 102.409 1.00 34.80 C
ATOM 22 P C B2023 34.340 119.793 105.047 1.00 38.16 P
ATOM 23 OP1 C B2023 32.982 119.770 104.485 1.00 38.21 O
ATOM 24 OP2 C B2023 34.553 120.288 106.427 1.00 40.58 O
ATOM 25 O5' C B2023 34.991 118.338 104.968 1.00 36.06 O
TER
ATOM 2 P C A2023 34.340 119.793 105.047 1.00 38.16 P
ATOM 3 OP1 C A2023 32.982 119.770 104.485 1.00 38.21 O
ATOM 4 OP2 C A2023 34.553 120.288 106.427 1.00 40.58 O
ATOM 5 O5' C A2023 34.991 118.338 104.968 1.00 36.06 O
ATOM 6 C5' C A2023 34.431 117.308 104.137 1.00 34.84 C
ATOM 7 C4' C A2023 34.834 115.944 104.650 1.00 34.11 C
ATOM 8 O4' C A2023 36.271 115.756 104.537 1.00 33.30 O
ATOM 9 C3' C A2023 34.525 115.730 106.121 1.00 35.29 C
ATOM 10 O3' C A2023 33.196 115.267 106.261 1.00 37.65 O
ATOM 11 C2' C A2023 35.539 114.675 106.527 1.00 34.65 C
ATOM 12 O2' C A2023 35.129 113.381 106.143 1.00 34.03 O
ATOM 13 C1' C A2023 36.756 115.092 105.695 1.00 34.71 C
ATOM 14 N1 C A2023 37.681 116.005 106.399 1.00 35.78 N
ATOM 15 C2 C A2023 38.479 115.504 107.443 1.00 36.94 C
ATOM 16 O2 C A2023 38.337 114.321 107.804 1.00 34.94 O
ATOM 17 N3 C A2023 39.375 116.326 108.037 1.00 37.69 N
ATOM 18 C4 C A2023 39.473 117.601 107.647 1.00 36.75 C
ATOM 19 N4 C A2023 40.375 118.377 108.257 1.00 36.45 N
ATOM 20 C5 C A2023 38.652 118.139 106.618 1.00 33.57 C
ATOM 21 C6 C A2023 37.781 117.319 106.030 1.00 34.10 C
ATOM 22 P U A2024 32.219 115.954 107.330 1.00 41.27 P
ATOM 23 OP1 U A2024 30.847 115.506 106.949 1.00 42.82 O
ATOM 24 OP2 U A2024 32.516 117.406 107.431 1.00 40.61 O
ATOM 25 O5' U A2024 32.623 115.261 108.703 1.00 39.03 O
TER
ATOM 1 O3' G B2021 40.321 123.471 107.359 1.00 40.97 O
ATOM 2 P U B2022 40.164 121.965 106.830 1.00 39.92 P
ATOM 3 OP1 U B2022 39.756 121.130 107.980 1.00 41.74 O
ATOM 4 OP2 U B2022 41.385 121.616 106.081 1.00 40.82 O
ATOM 5 O5' U B2022 38.965 122.037 105.785 1.00 39.97 O
ATOM 6 C5' U B2022 37.686 122.564 106.151 1.00 38.03 C
ATOM 7 C4' U B2022 36.705 122.392 105.012 1.00 39.79 C
ATOM 8 O4' U B2022 37.086 123.249 103.892 1.00 40.75 O
ATOM 9 C3' U B2022 36.592 120.975 104.445 1.00 40.06 C
ATOM 10 O3' U B2022 35.244 120.704 104.085 1.00 40.18 O
ATOM 11 C2' U B2022 37.465 121.039 103.194 1.00 39.78 C
ATOM 12 O2' U B2022 37.106 120.133 102.169 1.00 41.72 O
ATOM 13 C1' U B2022 37.205 122.462 102.717 1.00 39.08 C
ATOM 14 N1 U B2022 38.311 122.971 101.893 1.00 38.05 N
ATOM 15 C2 U B2022 38.040 123.275 100.562 1.00 37.63 C
ATOM 16 O2 U B2022 36.934 123.182 100.069 1.00 35.99 O
ATOM 17 N3 U B2022 39.124 123.693 99.831 1.00 37.07 N
ATOM 18 C4 U B2022 40.418 123.841 100.277 1.00 35.10 C
ATOM 19 O4 U B2022 41.287 124.202 99.486 1.00 34.78 O
ATOM 20 C5 U B2022 40.614 123.544 101.668 1.00 33.42 C
ATOM 21 C6 U B2022 39.583 123.128 102.409 1.00 34.80 C
ATOM 22 P C B2023 34.340 119.793 105.047 1.00 38.16 P
ATOM 23 OP1 C B2023 32.982 119.770 104.485 1.00 38.21 O
ATOM 24 OP2 C B2023 34.553 120.288 106.427 1.00 40.58 O
ATOM 25 O5' C B2023 34.991 118.338 104.968 1.00 36.06 O
TER
Atoms:
C2: (38.479,115.504,107.443)
OP1: (32.982,119.770,104.485)
OP2: (34.553,120.288,106.427)
C4: (39.473,117.601,107.647)
O5': (34.991,118.338,104.968)
C3': (34.525,115.730,106.121)
C1': (36.756,115.092,105.695)
O4': (36.271,115.756,104.537)
C5': (34.431,117.308,104.137)
P: (34.340,119.793,105.047)
O2: (38.337,114.321,107.804)
C4': (34.834,115.944,104.650)
C2': (35.539,114.675,106.527)
O2': (35.129,113.381,106.143)
N1: (37.681,116.005,106.399)
N3: (39.375,116.326,108.037)
N4: (40.375,118.377,108.257)
C6: (37.781,117.319,106.030)
C5: (38.652,118.139,106.618)
O3': (33.196,115.267,106.261)
OP1: (32.982,119.770,104.485)
OP2: (34.553,120.288,106.427)
C4: (39.473,117.601,107.647)
O5': (34.991,118.338,104.968)
C3': (34.525,115.730,106.121)
C1': (36.756,115.092,105.695)
O4': (36.271,115.756,104.537)
C5': (34.431,117.308,104.137)
P: (34.340,119.793,105.047)
O2: (38.337,114.321,107.804)
C4': (34.834,115.944,104.650)
C2': (35.539,114.675,106.527)
O2': (35.129,113.381,106.143)
N1: (37.681,116.005,106.399)
N3: (39.375,116.326,108.037)
N4: (40.375,118.377,108.257)
C6: (37.781,117.319,106.030)
C5: (38.652,118.139,106.618)
O3': (33.196,115.267,106.261)
C4: (40.418,123.841,100.277)
N3: (39.124,123.693,99.831)
OP1: (39.756,121.130,107.980)
OP2: (41.385,121.616,106.081)
C2: (38.040,123.275,100.562)
C1': (37.205,122.462,102.717)
C3': (36.592,120.975,104.445)
O5': (38.965,122.037,105.785)
O4': (37.086,123.249,103.892)
C5': (37.686,122.564,106.151)
P: (40.164,121.965,106.830)
C4': (36.705,122.392,105.012)
C2': (37.465,121.039,103.194)
O2': (37.106,120.133,102.169)
N1: (38.311,122.971,101.893)
O4: (41.287,124.202,99.486)
O2: (36.934,123.182,100.069)
C6: (39.583,123.128,102.409)
C5: (40.614,123.544,101.668)
O3': (35.244,120.704,104.085)
N3: (39.124,123.693,99.831)
OP1: (39.756,121.130,107.980)
OP2: (41.385,121.616,106.081)
C2: (38.040,123.275,100.562)
C1': (37.205,122.462,102.717)
C3': (36.592,120.975,104.445)
O5': (38.965,122.037,105.785)
O4': (37.086,123.249,103.892)
C5': (37.686,122.564,106.151)
P: (40.164,121.965,106.830)
C4': (36.705,122.392,105.012)
C2': (37.465,121.039,103.194)
O2': (37.106,120.133,102.169)
N1: (38.311,122.971,101.893)
O4: (41.287,124.202,99.486)
O2: (36.934,123.182,100.069)
C6: (39.583,123.128,102.409)
C5: (40.614,123.544,101.668)
O3': (35.244,120.704,104.085)
Image (generated by PyMOL):