Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.339 94.127 114.550 1.00 42.90 O
ATOM 2 P C A1085 43.721 94.704 115.118 1.00 45.43 P
ATOM 3 OP1 C A1085 44.755 93.713 114.714 1.00 43.69 O
ATOM 4 OP2 C A1085 43.565 95.051 116.549 1.00 45.49 O
ATOM 5 O5' C A1085 43.928 96.063 114.310 1.00 46.12 O
ATOM 6 C5' C A1085 43.861 96.082 112.868 1.00 48.31 C
ATOM 7 C4' C A1085 43.966 97.501 112.344 1.00 48.91 C
ATOM 8 O4' C A1085 42.839 98.285 112.824 1.00 49.33 O
ATOM 9 C3' C A1085 45.215 98.283 112.721 1.00 47.85 C
ATOM 10 O3' C A1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 11 C2' C A1085 44.759 99.058 113.955 1.00 49.22 C
ATOM 12 O2' C A1085 45.487 100.247 114.194 1.00 49.95 O
ATOM 13 C1' C A1085 43.300 99.364 113.611 1.00 48.56 C
ATOM 14 N1 C A1085 42.422 99.449 114.793 1.00 48.57 N
ATOM 15 C2 C A1085 41.740 100.652 115.062 1.00 48.47 C
ATOM 16 O2 C A1085 41.912 101.632 114.316 1.00 48.39 O
ATOM 17 N3 C A1085 40.913 100.711 116.130 1.00 48.37 N
ATOM 18 C4 C A1085 40.760 99.641 116.919 1.00 49.17 C
ATOM 19 N4 C A1085 39.931 99.745 117.958 1.00 50.54 N
ATOM 20 C5 C A1085 41.449 98.416 116.677 1.00 48.80 C
ATOM 21 C6 C A1085 42.260 98.365 115.615 1.00 48.75 C
ATOM 22 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 23 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 24 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 25 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
TER
ATOM 1 O3' A B1083 38.229 94.871 119.073 1.00 34.74 O
ATOM 2 P U B1084 39.610 95.656 118.917 1.00 35.61 P
ATOM 3 OP1 U B1084 40.632 95.034 119.796 1.00 35.58 O
ATOM 4 OP2 U B1084 39.288 97.094 119.069 1.00 35.86 O
ATOM 5 O5' U B1084 40.011 95.382 117.402 1.00 38.08 O
ATOM 6 C5' U B1084 40.184 94.029 116.923 1.00 40.12 C
ATOM 7 C4' U B1084 40.121 93.993 115.417 1.00 41.07 C
ATOM 8 O4' U B1084 38.832 94.475 114.970 1.00 40.91 O
ATOM 9 C3' U B1084 41.135 94.869 114.705 1.00 41.52 C
ATOM 10 O3' U B1084 42.339 94.127 114.550 1.00 42.90 O
ATOM 11 C2' U B1084 40.467 95.116 113.358 1.00 41.56 C
ATOM 12 O2' U B1084 40.648 94.033 112.468 1.00 43.49 O
ATOM 13 C1' U B1084 38.986 95.170 113.749 1.00 40.44 C
ATOM 14 N1 U B1084 38.397 96.507 113.901 1.00 38.96 N
ATOM 15 C2 U B1084 38.062 97.206 112.752 1.00 39.41 C
ATOM 16 O2 U B1084 38.272 96.781 111.622 1.00 40.48 O
ATOM 17 N3 U B1084 37.471 98.424 112.972 1.00 38.79 N
ATOM 18 C4 U B1084 37.195 99.003 114.192 1.00 39.56 C
ATOM 19 O4 U B1084 36.628 100.098 114.232 1.00 40.96 O
ATOM 20 C5 U B1084 37.591 98.226 115.322 1.00 39.40 C
ATOM 21 C6 U B1084 38.165 97.039 115.142 1.00 38.32 C
ATOM 22 P C B1085 43.721 94.704 115.118 1.00 45.43 P
ATOM 23 OP1 C B1085 44.755 93.713 114.714 1.00 43.69 O
ATOM 24 OP2 C B1085 43.565 95.051 116.549 1.00 45.49 O
ATOM 25 O5' C B1085 43.928 96.063 114.310 1.00 46.12 O
TER
ATOM 2 P C A1085 43.721 94.704 115.118 1.00 45.43 P
ATOM 3 OP1 C A1085 44.755 93.713 114.714 1.00 43.69 O
ATOM 4 OP2 C A1085 43.565 95.051 116.549 1.00 45.49 O
ATOM 5 O5' C A1085 43.928 96.063 114.310 1.00 46.12 O
ATOM 6 C5' C A1085 43.861 96.082 112.868 1.00 48.31 C
ATOM 7 C4' C A1085 43.966 97.501 112.344 1.00 48.91 C
ATOM 8 O4' C A1085 42.839 98.285 112.824 1.00 49.33 O
ATOM 9 C3' C A1085 45.215 98.283 112.721 1.00 47.85 C
ATOM 10 O3' C A1085 45.544 99.146 111.638 1.00 46.46 O
ATOM 11 C2' C A1085 44.759 99.058 113.955 1.00 49.22 C
ATOM 12 O2' C A1085 45.487 100.247 114.194 1.00 49.95 O
ATOM 13 C1' C A1085 43.300 99.364 113.611 1.00 48.56 C
ATOM 14 N1 C A1085 42.422 99.449 114.793 1.00 48.57 N
ATOM 15 C2 C A1085 41.740 100.652 115.062 1.00 48.47 C
ATOM 16 O2 C A1085 41.912 101.632 114.316 1.00 48.39 O
ATOM 17 N3 C A1085 40.913 100.711 116.130 1.00 48.37 N
ATOM 18 C4 C A1085 40.760 99.641 116.919 1.00 49.17 C
ATOM 19 N4 C A1085 39.931 99.745 117.958 1.00 50.54 N
ATOM 20 C5 C A1085 41.449 98.416 116.677 1.00 48.80 C
ATOM 21 C6 C A1085 42.260 98.365 115.615 1.00 48.75 C
ATOM 22 P C A1086 47.012 99.082 110.985 1.00 45.80 P
ATOM 23 OP1 C A1086 46.982 99.888 109.743 1.00 47.31 O
ATOM 24 OP2 C A1086 47.438 97.662 110.918 1.00 46.09 O
ATOM 25 O5' C A1086 47.908 99.856 112.048 1.00 44.58 O
TER
ATOM 1 O3' A B1083 38.229 94.871 119.073 1.00 34.74 O
ATOM 2 P U B1084 39.610 95.656 118.917 1.00 35.61 P
ATOM 3 OP1 U B1084 40.632 95.034 119.796 1.00 35.58 O
ATOM 4 OP2 U B1084 39.288 97.094 119.069 1.00 35.86 O
ATOM 5 O5' U B1084 40.011 95.382 117.402 1.00 38.08 O
ATOM 6 C5' U B1084 40.184 94.029 116.923 1.00 40.12 C
ATOM 7 C4' U B1084 40.121 93.993 115.417 1.00 41.07 C
ATOM 8 O4' U B1084 38.832 94.475 114.970 1.00 40.91 O
ATOM 9 C3' U B1084 41.135 94.869 114.705 1.00 41.52 C
ATOM 10 O3' U B1084 42.339 94.127 114.550 1.00 42.90 O
ATOM 11 C2' U B1084 40.467 95.116 113.358 1.00 41.56 C
ATOM 12 O2' U B1084 40.648 94.033 112.468 1.00 43.49 O
ATOM 13 C1' U B1084 38.986 95.170 113.749 1.00 40.44 C
ATOM 14 N1 U B1084 38.397 96.507 113.901 1.00 38.96 N
ATOM 15 C2 U B1084 38.062 97.206 112.752 1.00 39.41 C
ATOM 16 O2 U B1084 38.272 96.781 111.622 1.00 40.48 O
ATOM 17 N3 U B1084 37.471 98.424 112.972 1.00 38.79 N
ATOM 18 C4 U B1084 37.195 99.003 114.192 1.00 39.56 C
ATOM 19 O4 U B1084 36.628 100.098 114.232 1.00 40.96 O
ATOM 20 C5 U B1084 37.591 98.226 115.322 1.00 39.40 C
ATOM 21 C6 U B1084 38.165 97.039 115.142 1.00 38.32 C
ATOM 22 P C B1085 43.721 94.704 115.118 1.00 45.43 P
ATOM 23 OP1 C B1085 44.755 93.713 114.714 1.00 43.69 O
ATOM 24 OP2 C B1085 43.565 95.051 116.549 1.00 45.49 O
ATOM 25 O5' C B1085 43.928 96.063 114.310 1.00 46.12 O
TER
Atoms:
C2: (41.740,100.652,115.062)
OP1: (44.755,93.713,114.714)
OP2: (43.565,95.051,116.549)
C4: (40.760,99.641,116.919)
O5': (43.928,96.063,114.310)
C3': (45.215,98.283,112.721)
C1': (43.300,99.364,113.611)
O4': (42.839,98.285,112.824)
C5': (43.861,96.082,112.868)
P: (43.721,94.704,115.118)
O2: (41.912,101.632,114.316)
C4': (43.966,97.501,112.344)
C2': (44.759,99.058,113.955)
O2': (45.487,100.247,114.194)
N1: (42.422,99.449,114.793)
N3: (40.913,100.711,116.130)
N4: (39.931,99.745,117.958)
C6: (42.260,98.365,115.615)
C5: (41.449,98.416,116.677)
O3': (45.544,99.146,111.638)
OP1: (44.755,93.713,114.714)
OP2: (43.565,95.051,116.549)
C4: (40.760,99.641,116.919)
O5': (43.928,96.063,114.310)
C3': (45.215,98.283,112.721)
C1': (43.300,99.364,113.611)
O4': (42.839,98.285,112.824)
C5': (43.861,96.082,112.868)
P: (43.721,94.704,115.118)
O2: (41.912,101.632,114.316)
C4': (43.966,97.501,112.344)
C2': (44.759,99.058,113.955)
O2': (45.487,100.247,114.194)
N1: (42.422,99.449,114.793)
N3: (40.913,100.711,116.130)
N4: (39.931,99.745,117.958)
C6: (42.260,98.365,115.615)
C5: (41.449,98.416,116.677)
O3': (45.544,99.146,111.638)
C4: (37.195,99.003,114.192)
N3: (37.471,98.424,112.972)
OP1: (40.632,95.034,119.796)
OP2: (39.288,97.094,119.069)
C2: (38.062,97.206,112.752)
C1': (38.986,95.170,113.749)
C3': (41.135,94.869,114.705)
O5': (40.011,95.382,117.402)
O4': (38.832,94.475,114.970)
C5': (40.184,94.029,116.923)
P: (39.610,95.656,118.917)
C4': (40.121,93.993,115.417)
C2': (40.467,95.116,113.358)
O2': (40.648,94.033,112.468)
N1: (38.397,96.507,113.901)
O4: (36.628,100.098,114.232)
O2: (38.272,96.781,111.622)
C6: (38.165,97.039,115.142)
C5: (37.591,98.226,115.322)
O3': (42.339,94.127,114.550)
N3: (37.471,98.424,112.972)
OP1: (40.632,95.034,119.796)
OP2: (39.288,97.094,119.069)
C2: (38.062,97.206,112.752)
C1': (38.986,95.170,113.749)
C3': (41.135,94.869,114.705)
O5': (40.011,95.382,117.402)
O4': (38.832,94.475,114.970)
C5': (40.184,94.029,116.923)
P: (39.610,95.656,118.917)
C4': (40.121,93.993,115.417)
C2': (40.467,95.116,113.358)
O2': (40.648,94.033,112.468)
N1: (38.397,96.507,113.901)
O4: (36.628,100.098,114.232)
O2: (38.272,96.781,111.622)
C6: (38.165,97.039,115.142)
C5: (37.591,98.226,115.322)
O3': (42.339,94.127,114.550)
Image (generated by PyMOL):