Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A39:A10
Extra
PDB:
ATOM 1 O3' C A 38 -21.860 -15.352 10.695 1.00 30.80 O
ATOM 2 P C A 39 -22.657 -16.566 11.406 1.00 36.01 P
ATOM 3 OP1 C A 39 -21.647 -17.585 11.830 1.00 36.62 O
ATOM 4 OP2 C A 39 -23.804 -16.986 10.546 1.00 36.51 O
ATOM 5 O5' C A 39 -23.383 -15.859 12.643 1.00 36.08 O
ATOM 6 C5' C A 39 -22.779 -15.779 13.917 1.00 33.91 C
ATOM 7 C4' C A 39 -22.765 -14.357 14.470 1.00 33.78 C
ATOM 8 O4' C A 39 -21.924 -13.469 13.734 1.00 30.31 O
ATOM 9 C3' C A 39 -23.913 -13.440 14.933 1.00 34.21 C
ATOM 10 O3' C A 39 -24.664 -13.901 16.068 1.00 35.17 O
ATOM 11 C2' C A 39 -23.056 -12.294 15.444 1.00 32.36 C
ATOM 12 O2' C A 39 -22.359 -12.654 16.623 1.00 32.85 O
ATOM 13 C1' C A 39 -22.027 -12.179 14.314 1.00 31.56 C
ATOM 14 N1 C A 39 -22.423 -11.201 13.275 1.00 28.20 N
ATOM 15 C2 C A 39 -22.371 -9.853 13.585 1.00 28.74 C
ATOM 16 O2 C A 39 -21.974 -9.528 14.708 1.00 27.15 O
ATOM 17 N3 C A 39 -22.748 -8.930 12.644 1.00 29.12 N
ATOM 18 C4 C A 39 -23.146 -9.351 11.433 1.00 28.81 C
ATOM 19 N4 C A 39 -23.509 -8.450 10.518 1.00 28.93 N
ATOM 20 C5 C A 39 -23.188 -10.726 11.099 1.00 29.92 C
ATOM 21 C6 C A 39 -22.829 -11.609 12.045 1.00 27.80 C
ATOM 22 P G A 40 -26.191 -13.383 16.348 1.00 34.80 P
ATOM 23 OP1 G A 40 -26.620 -14.342 17.417 1.00 37.25 O
ATOM 24 OP2 G A 40 -27.013 -13.259 15.102 1.00 34.59 O
ATOM 25 O5' G A 40 -26.016 -12.008 17.099 1.00 34.21 O
TER
ATOM 1 O3' A B 9 -21.524 -10.392 7.601 1.00 32.10 O
ATOM 2 P U B 10 -23.089 -10.110 7.200 1.00 33.18 P
ATOM 3 OP1 U B 10 -23.428 -8.766 7.772 1.00 32.96 O
ATOM 4 OP2 U B 10 -23.956 -11.272 7.531 1.00 33.30 O
ATOM 5 O5' U B 10 -23.069 -10.215 5.606 1.00 34.63 O
ATOM 6 C5' U B 10 -23.013 -9.076 4.749 1.00 37.02 C
ATOM 7 C4' U B 10 -22.461 -9.485 3.393 1.00 38.37 C
ATOM 8 O4' U B 10 -21.084 -9.935 3.558 1.00 38.04 O
ATOM 9 C3' U B 10 -23.118 -10.681 2.717 1.00 39.49 C
ATOM 10 O3' U B 10 -24.276 -10.307 1.991 1.00 41.59 O
ATOM 11 C2' U B 10 -22.033 -11.105 1.746 1.00 39.61 C
ATOM 12 O2' U B 10 -21.943 -10.180 0.679 1.00 39.73 O
ATOM 13 C1' U B 10 -20.794 -10.968 2.623 1.00 37.72 C
ATOM 14 N1 U B 10 -20.439 -12.190 3.362 1.00 37.47 N
ATOM 15 C2 U B 10 -19.962 -13.284 2.645 1.00 37.45 C
ATOM 16 O2 U B 10 -19.843 -13.299 1.428 1.00 39.84 O
ATOM 17 N3 U B 10 -19.627 -14.364 3.398 1.00 36.13 N
ATOM 18 C4 U B 10 -19.719 -14.488 4.766 1.00 36.66 C
ATOM 19 O4 U B 10 -19.366 -15.539 5.296 1.00 36.63 O
ATOM 20 C5 U B 10 -20.229 -13.336 5.439 1.00 37.69 C
ATOM 21 C6 U B 10 -20.562 -12.247 4.730 1.00 36.64 C
ATOM 22 P C B 11 -25.568 -11.250 2.013 1.00 44.17 P
ATOM 23 OP1 C B 11 -26.698 -10.453 1.487 1.00 44.16 O
ATOM 24 OP2 C B 11 -25.681 -11.840 3.368 1.00 45.88 O
ATOM 25 O5' C B 11 -25.224 -12.440 1.023 1.00 44.11 O
TER
ATOM 2 P C A 39 -22.657 -16.566 11.406 1.00 36.01 P
ATOM 3 OP1 C A 39 -21.647 -17.585 11.830 1.00 36.62 O
ATOM 4 OP2 C A 39 -23.804 -16.986 10.546 1.00 36.51 O
ATOM 5 O5' C A 39 -23.383 -15.859 12.643 1.00 36.08 O
ATOM 6 C5' C A 39 -22.779 -15.779 13.917 1.00 33.91 C
ATOM 7 C4' C A 39 -22.765 -14.357 14.470 1.00 33.78 C
ATOM 8 O4' C A 39 -21.924 -13.469 13.734 1.00 30.31 O
ATOM 9 C3' C A 39 -23.913 -13.440 14.933 1.00 34.21 C
ATOM 10 O3' C A 39 -24.664 -13.901 16.068 1.00 35.17 O
ATOM 11 C2' C A 39 -23.056 -12.294 15.444 1.00 32.36 C
ATOM 12 O2' C A 39 -22.359 -12.654 16.623 1.00 32.85 O
ATOM 13 C1' C A 39 -22.027 -12.179 14.314 1.00 31.56 C
ATOM 14 N1 C A 39 -22.423 -11.201 13.275 1.00 28.20 N
ATOM 15 C2 C A 39 -22.371 -9.853 13.585 1.00 28.74 C
ATOM 16 O2 C A 39 -21.974 -9.528 14.708 1.00 27.15 O
ATOM 17 N3 C A 39 -22.748 -8.930 12.644 1.00 29.12 N
ATOM 18 C4 C A 39 -23.146 -9.351 11.433 1.00 28.81 C
ATOM 19 N4 C A 39 -23.509 -8.450 10.518 1.00 28.93 N
ATOM 20 C5 C A 39 -23.188 -10.726 11.099 1.00 29.92 C
ATOM 21 C6 C A 39 -22.829 -11.609 12.045 1.00 27.80 C
ATOM 22 P G A 40 -26.191 -13.383 16.348 1.00 34.80 P
ATOM 23 OP1 G A 40 -26.620 -14.342 17.417 1.00 37.25 O
ATOM 24 OP2 G A 40 -27.013 -13.259 15.102 1.00 34.59 O
ATOM 25 O5' G A 40 -26.016 -12.008 17.099 1.00 34.21 O
TER
ATOM 1 O3' A B 9 -21.524 -10.392 7.601 1.00 32.10 O
ATOM 2 P U B 10 -23.089 -10.110 7.200 1.00 33.18 P
ATOM 3 OP1 U B 10 -23.428 -8.766 7.772 1.00 32.96 O
ATOM 4 OP2 U B 10 -23.956 -11.272 7.531 1.00 33.30 O
ATOM 5 O5' U B 10 -23.069 -10.215 5.606 1.00 34.63 O
ATOM 6 C5' U B 10 -23.013 -9.076 4.749 1.00 37.02 C
ATOM 7 C4' U B 10 -22.461 -9.485 3.393 1.00 38.37 C
ATOM 8 O4' U B 10 -21.084 -9.935 3.558 1.00 38.04 O
ATOM 9 C3' U B 10 -23.118 -10.681 2.717 1.00 39.49 C
ATOM 10 O3' U B 10 -24.276 -10.307 1.991 1.00 41.59 O
ATOM 11 C2' U B 10 -22.033 -11.105 1.746 1.00 39.61 C
ATOM 12 O2' U B 10 -21.943 -10.180 0.679 1.00 39.73 O
ATOM 13 C1' U B 10 -20.794 -10.968 2.623 1.00 37.72 C
ATOM 14 N1 U B 10 -20.439 -12.190 3.362 1.00 37.47 N
ATOM 15 C2 U B 10 -19.962 -13.284 2.645 1.00 37.45 C
ATOM 16 O2 U B 10 -19.843 -13.299 1.428 1.00 39.84 O
ATOM 17 N3 U B 10 -19.627 -14.364 3.398 1.00 36.13 N
ATOM 18 C4 U B 10 -19.719 -14.488 4.766 1.00 36.66 C
ATOM 19 O4 U B 10 -19.366 -15.539 5.296 1.00 36.63 O
ATOM 20 C5 U B 10 -20.229 -13.336 5.439 1.00 37.69 C
ATOM 21 C6 U B 10 -20.562 -12.247 4.730 1.00 36.64 C
ATOM 22 P C B 11 -25.568 -11.250 2.013 1.00 44.17 P
ATOM 23 OP1 C B 11 -26.698 -10.453 1.487 1.00 44.16 O
ATOM 24 OP2 C B 11 -25.681 -11.840 3.368 1.00 45.88 O
ATOM 25 O5' C B 11 -25.224 -12.440 1.023 1.00 44.11 O
TER
Atoms:
C2: (-22.371,-9.853,13.585)
OP1: (-21.647,-17.585,11.830)
OP2: (-23.804,-16.986,10.546)
C4: (-23.146,-9.351,11.433)
O5': (-23.383,-15.859,12.643)
C3': (-23.913,-13.440,14.933)
C1': (-22.027,-12.179,14.314)
O4': (-21.924,-13.469,13.734)
C5': (-22.779,-15.779,13.917)
P: (-22.657,-16.566,11.406)
O2: (-21.974,-9.528,14.708)
C4': (-22.765,-14.357,14.470)
C2': (-23.056,-12.294,15.444)
O2': (-22.359,-12.654,16.623)
N1: (-22.423,-11.201,13.275)
N3: (-22.748,-8.930,12.644)
N4: (-23.509,-8.450,10.518)
C6: (-22.829,-11.609,12.045)
C5: (-23.188,-10.726,11.099)
O3': (-24.664,-13.901,16.068)
OP1: (-21.647,-17.585,11.830)
OP2: (-23.804,-16.986,10.546)
C4: (-23.146,-9.351,11.433)
O5': (-23.383,-15.859,12.643)
C3': (-23.913,-13.440,14.933)
C1': (-22.027,-12.179,14.314)
O4': (-21.924,-13.469,13.734)
C5': (-22.779,-15.779,13.917)
P: (-22.657,-16.566,11.406)
O2: (-21.974,-9.528,14.708)
C4': (-22.765,-14.357,14.470)
C2': (-23.056,-12.294,15.444)
O2': (-22.359,-12.654,16.623)
N1: (-22.423,-11.201,13.275)
N3: (-22.748,-8.930,12.644)
N4: (-23.509,-8.450,10.518)
C6: (-22.829,-11.609,12.045)
C5: (-23.188,-10.726,11.099)
O3': (-24.664,-13.901,16.068)
C4: (-19.719,-14.488,4.766)
N3: (-19.627,-14.364,3.398)
OP1: (-23.428,-8.766,7.772)
OP2: (-23.956,-11.272,7.531)
C2: (-19.962,-13.284,2.645)
C1': (-20.794,-10.968,2.623)
C3': (-23.118,-10.681,2.717)
O5': (-23.069,-10.215,5.606)
O4': (-21.084,-9.935,3.558)
C5': (-23.013,-9.076,4.749)
P: (-23.089,-10.110,7.200)
C4': (-22.461,-9.485,3.393)
C2': (-22.033,-11.105,1.746)
O2': (-21.943,-10.180,0.679)
N1: (-20.439,-12.190,3.362)
O4: (-19.366,-15.539,5.296)
O2: (-19.843,-13.299,1.428)
C6: (-20.562,-12.247,4.730)
C5: (-20.229,-13.336,5.439)
O3': (-24.276,-10.307,1.991)
N3: (-19.627,-14.364,3.398)
OP1: (-23.428,-8.766,7.772)
OP2: (-23.956,-11.272,7.531)
C2: (-19.962,-13.284,2.645)
C1': (-20.794,-10.968,2.623)
C3': (-23.118,-10.681,2.717)
O5': (-23.069,-10.215,5.606)
O4': (-21.084,-9.935,3.558)
C5': (-23.013,-9.076,4.749)
P: (-23.089,-10.110,7.200)
C4': (-22.461,-9.485,3.393)
C2': (-22.033,-11.105,1.746)
O2': (-21.943,-10.180,0.679)
N1: (-20.439,-12.190,3.362)
O4: (-19.366,-15.539,5.296)
O2: (-19.843,-13.299,1.428)
C6: (-20.562,-12.247,4.730)
C5: (-20.229,-13.336,5.439)
O3': (-24.276,-10.307,1.991)
Image (generated by PyMOL):