Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1687:A1686
Extra
PDB:
ATOM 1 O3' U A1686 -49.343 -3.673 -3.376 1.00 0.01 O
ATOM 2 P C A1687 -48.265 -2.514 -3.406 1.00 0.01 P
ATOM 3 OP1 C A1687 -47.357 -2.723 -2.263 1.00 0.01 O
ATOM 4 OP2 C A1687 -49.016 -1.250 -3.492 1.00 0.01 O
ATOM 5 O5' C A1687 -47.490 -2.794 -4.766 1.00 0.01 O
ATOM 6 C5' C A1687 -46.191 -3.359 -4.742 1.00 0.01 C
ATOM 7 C4' C A1687 -45.488 -3.169 -6.047 1.00 0.01 C
ATOM 8 O4' C A1687 -46.400 -3.548 -7.114 1.00 0.01 O
ATOM 9 C3' C A1687 -45.072 -1.728 -6.353 1.00 0.01 C
ATOM 10 O3' C A1687 -43.921 -1.708 -7.201 1.00 0.01 O
ATOM 11 C2' C A1687 -46.250 -1.245 -7.167 1.00 0.01 C
ATOM 12 O2' C A1687 -45.994 -0.113 -7.971 1.00 0.01 O
ATOM 13 C1' C A1687 -46.511 -2.474 -8.007 1.00 0.01 C
ATOM 14 N1 C A1687 -47.820 -2.484 -8.619 1.00 0.01 N
ATOM 15 C2 C A1687 -47.843 -2.400 -10.007 1.00 0.01 C
ATOM 16 O2 C A1687 -46.767 -2.404 -10.648 1.00 0.01 O
ATOM 17 N3 C A1687 -49.039 -2.348 -10.625 1.00 0.01 N
ATOM 18 C4 C A1687 -50.140 -2.350 -9.892 1.00 0.01 C
ATOM 19 N4 C A1687 -51.278 -2.301 -10.559 1.00 0.01 N
ATOM 20 C5 C A1687 -50.137 -2.407 -8.480 1.00 0.01 C
ATOM 21 C6 C A1687 -48.949 -2.456 -7.874 1.00 0.01 C
ATOM 22 P G A1688 -42.468 -2.045 -6.638 1.00 0.01 P
ATOM 23 OP1 G A1688 -42.219 -1.161 -5.471 1.00 0.01 O
ATOM 24 OP2 G A1688 -41.544 -1.989 -7.793 1.00 0.01 O
ATOM 25 O5' G A1688 -42.649 -3.539 -6.158 1.00 0.01 O
TER
ATOM 1 O3' U B1685 -53.973 -4.717 -7.653 1.00 0.01 O
ATOM 2 P U B1686 -53.759 -3.229 -7.163 1.00 0.01 P
ATOM 3 OP1 U B1686 -54.963 -2.850 -6.392 1.00 0.01 O
ATOM 4 OP2 U B1686 -53.397 -2.464 -8.354 1.00 0.01 O
ATOM 5 O5' U B1686 -52.506 -3.349 -6.200 1.00 0.01 O
ATOM 6 C5' U B1686 -52.204 -2.353 -5.261 1.00 0.01 C
ATOM 7 C4' U B1686 -51.505 -2.944 -4.091 1.00 0.01 C
ATOM 8 O4' U B1686 -52.404 -3.871 -3.426 1.00 0.01 O
ATOM 9 C3' U B1686 -50.278 -3.767 -4.441 1.00 0.01 C
ATOM 10 O3' U B1686 -49.343 -3.673 -3.376 1.00 0.01 O
ATOM 11 C2' U B1686 -50.842 -5.188 -4.511 1.00 0.01 C
ATOM 12 O2' U B1686 -49.894 -6.222 -4.391 1.00 0.01 O
ATOM 13 C1' U B1686 -51.784 -5.149 -3.345 1.00 0.01 C
ATOM 14 N1 U B1686 -52.811 -6.180 -3.382 1.00 0.01 N
ATOM 15 C2 U B1686 -52.848 -7.037 -2.313 1.00 0.01 C
ATOM 16 O2 U B1686 -52.079 -6.979 -1.392 1.00 0.01 O
ATOM 17 N3 U B1686 -53.817 -7.976 -2.357 1.00 0.01 N
ATOM 18 C4 U B1686 -54.715 -8.127 -3.377 1.00 0.01 C
ATOM 19 O4 U B1686 -55.535 -9.033 -3.308 1.00 0.01 O
ATOM 20 C5 U B1686 -54.608 -7.201 -4.454 1.00 0.01 C
ATOM 21 C6 U B1686 -53.669 -6.278 -4.426 1.00 0.01 C
ATOM 22 P C B1687 -48.265 -2.514 -3.406 1.00 0.01 P
ATOM 23 OP1 C B1687 -47.357 -2.723 -2.263 1.00 0.01 O
ATOM 24 OP2 C B1687 -49.016 -1.250 -3.492 1.00 0.01 O
ATOM 25 O5' C B1687 -47.490 -2.794 -4.766 1.00 0.01 O
TER
ATOM 2 P C A1687 -48.265 -2.514 -3.406 1.00 0.01 P
ATOM 3 OP1 C A1687 -47.357 -2.723 -2.263 1.00 0.01 O
ATOM 4 OP2 C A1687 -49.016 -1.250 -3.492 1.00 0.01 O
ATOM 5 O5' C A1687 -47.490 -2.794 -4.766 1.00 0.01 O
ATOM 6 C5' C A1687 -46.191 -3.359 -4.742 1.00 0.01 C
ATOM 7 C4' C A1687 -45.488 -3.169 -6.047 1.00 0.01 C
ATOM 8 O4' C A1687 -46.400 -3.548 -7.114 1.00 0.01 O
ATOM 9 C3' C A1687 -45.072 -1.728 -6.353 1.00 0.01 C
ATOM 10 O3' C A1687 -43.921 -1.708 -7.201 1.00 0.01 O
ATOM 11 C2' C A1687 -46.250 -1.245 -7.167 1.00 0.01 C
ATOM 12 O2' C A1687 -45.994 -0.113 -7.971 1.00 0.01 O
ATOM 13 C1' C A1687 -46.511 -2.474 -8.007 1.00 0.01 C
ATOM 14 N1 C A1687 -47.820 -2.484 -8.619 1.00 0.01 N
ATOM 15 C2 C A1687 -47.843 -2.400 -10.007 1.00 0.01 C
ATOM 16 O2 C A1687 -46.767 -2.404 -10.648 1.00 0.01 O
ATOM 17 N3 C A1687 -49.039 -2.348 -10.625 1.00 0.01 N
ATOM 18 C4 C A1687 -50.140 -2.350 -9.892 1.00 0.01 C
ATOM 19 N4 C A1687 -51.278 -2.301 -10.559 1.00 0.01 N
ATOM 20 C5 C A1687 -50.137 -2.407 -8.480 1.00 0.01 C
ATOM 21 C6 C A1687 -48.949 -2.456 -7.874 1.00 0.01 C
ATOM 22 P G A1688 -42.468 -2.045 -6.638 1.00 0.01 P
ATOM 23 OP1 G A1688 -42.219 -1.161 -5.471 1.00 0.01 O
ATOM 24 OP2 G A1688 -41.544 -1.989 -7.793 1.00 0.01 O
ATOM 25 O5' G A1688 -42.649 -3.539 -6.158 1.00 0.01 O
TER
ATOM 1 O3' U B1685 -53.973 -4.717 -7.653 1.00 0.01 O
ATOM 2 P U B1686 -53.759 -3.229 -7.163 1.00 0.01 P
ATOM 3 OP1 U B1686 -54.963 -2.850 -6.392 1.00 0.01 O
ATOM 4 OP2 U B1686 -53.397 -2.464 -8.354 1.00 0.01 O
ATOM 5 O5' U B1686 -52.506 -3.349 -6.200 1.00 0.01 O
ATOM 6 C5' U B1686 -52.204 -2.353 -5.261 1.00 0.01 C
ATOM 7 C4' U B1686 -51.505 -2.944 -4.091 1.00 0.01 C
ATOM 8 O4' U B1686 -52.404 -3.871 -3.426 1.00 0.01 O
ATOM 9 C3' U B1686 -50.278 -3.767 -4.441 1.00 0.01 C
ATOM 10 O3' U B1686 -49.343 -3.673 -3.376 1.00 0.01 O
ATOM 11 C2' U B1686 -50.842 -5.188 -4.511 1.00 0.01 C
ATOM 12 O2' U B1686 -49.894 -6.222 -4.391 1.00 0.01 O
ATOM 13 C1' U B1686 -51.784 -5.149 -3.345 1.00 0.01 C
ATOM 14 N1 U B1686 -52.811 -6.180 -3.382 1.00 0.01 N
ATOM 15 C2 U B1686 -52.848 -7.037 -2.313 1.00 0.01 C
ATOM 16 O2 U B1686 -52.079 -6.979 -1.392 1.00 0.01 O
ATOM 17 N3 U B1686 -53.817 -7.976 -2.357 1.00 0.01 N
ATOM 18 C4 U B1686 -54.715 -8.127 -3.377 1.00 0.01 C
ATOM 19 O4 U B1686 -55.535 -9.033 -3.308 1.00 0.01 O
ATOM 20 C5 U B1686 -54.608 -7.201 -4.454 1.00 0.01 C
ATOM 21 C6 U B1686 -53.669 -6.278 -4.426 1.00 0.01 C
ATOM 22 P C B1687 -48.265 -2.514 -3.406 1.00 0.01 P
ATOM 23 OP1 C B1687 -47.357 -2.723 -2.263 1.00 0.01 O
ATOM 24 OP2 C B1687 -49.016 -1.250 -3.492 1.00 0.01 O
ATOM 25 O5' C B1687 -47.490 -2.794 -4.766 1.00 0.01 O
TER
Atoms:
C2: (-47.843,-2.400,-10.007)
OP1: (-47.357,-2.723,-2.263)
OP2: (-49.016,-1.250,-3.492)
C4: (-50.140,-2.350,-9.892)
O5': (-47.490,-2.794,-4.766)
C3': (-45.072,-1.728,-6.353)
C1': (-46.511,-2.474,-8.007)
O4': (-46.400,-3.548,-7.114)
C5': (-46.191,-3.359,-4.742)
P: (-48.265,-2.514,-3.406)
O2: (-46.767,-2.404,-10.648)
C4': (-45.488,-3.169,-6.047)
C2': (-46.250,-1.245,-7.167)
O2': (-45.994,-0.113,-7.971)
N1: (-47.820,-2.484,-8.619)
N3: (-49.039,-2.348,-10.625)
N4: (-51.278,-2.301,-10.559)
C6: (-48.949,-2.456,-7.874)
C5: (-50.137,-2.407,-8.480)
O3': (-43.921,-1.708,-7.201)
OP1: (-47.357,-2.723,-2.263)
OP2: (-49.016,-1.250,-3.492)
C4: (-50.140,-2.350,-9.892)
O5': (-47.490,-2.794,-4.766)
C3': (-45.072,-1.728,-6.353)
C1': (-46.511,-2.474,-8.007)
O4': (-46.400,-3.548,-7.114)
C5': (-46.191,-3.359,-4.742)
P: (-48.265,-2.514,-3.406)
O2: (-46.767,-2.404,-10.648)
C4': (-45.488,-3.169,-6.047)
C2': (-46.250,-1.245,-7.167)
O2': (-45.994,-0.113,-7.971)
N1: (-47.820,-2.484,-8.619)
N3: (-49.039,-2.348,-10.625)
N4: (-51.278,-2.301,-10.559)
C6: (-48.949,-2.456,-7.874)
C5: (-50.137,-2.407,-8.480)
O3': (-43.921,-1.708,-7.201)
C4: (-54.715,-8.127,-3.377)
N3: (-53.817,-7.976,-2.357)
OP1: (-54.963,-2.850,-6.392)
OP2: (-53.397,-2.464,-8.354)
C2: (-52.848,-7.037,-2.313)
C1': (-51.784,-5.149,-3.345)
C3': (-50.278,-3.767,-4.441)
O5': (-52.506,-3.349,-6.200)
O4': (-52.404,-3.871,-3.426)
C5': (-52.204,-2.353,-5.261)
P: (-53.759,-3.229,-7.163)
C4': (-51.505,-2.944,-4.091)
C2': (-50.842,-5.188,-4.511)
O2': (-49.894,-6.222,-4.391)
N1: (-52.811,-6.180,-3.382)
O4: (-55.535,-9.033,-3.308)
O2: (-52.079,-6.979,-1.392)
C6: (-53.669,-6.278,-4.426)
C5: (-54.608,-7.201,-4.454)
O3': (-49.343,-3.673,-3.376)
N3: (-53.817,-7.976,-2.357)
OP1: (-54.963,-2.850,-6.392)
OP2: (-53.397,-2.464,-8.354)
C2: (-52.848,-7.037,-2.313)
C1': (-51.784,-5.149,-3.345)
C3': (-50.278,-3.767,-4.441)
O5': (-52.506,-3.349,-6.200)
O4': (-52.404,-3.871,-3.426)
C5': (-52.204,-2.353,-5.261)
P: (-53.759,-3.229,-7.163)
C4': (-51.505,-2.944,-4.091)
C2': (-50.842,-5.188,-4.511)
O2': (-49.894,-6.222,-4.391)
N1: (-52.811,-6.180,-3.382)
O4: (-55.535,-9.033,-3.308)
O2: (-52.079,-6.979,-1.392)
C6: (-53.669,-6.278,-4.426)
C5: (-54.608,-7.201,-4.454)
O3': (-49.343,-3.673,-3.376)
Image (generated by PyMOL):