Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01730:01729
Extra
PDB:
ATOM 1 O3' U A1729 121.628 144.827 96.863 1.00 56.70 O
ATOM 2 P C A1730 122.961 145.716 96.720 1.00 56.92 P
ATOM 3 OP1 C A1730 123.013 146.222 95.322 1.00 56.63 O
ATOM 4 OP2 C A1730 124.076 144.889 97.241 1.00 57.72 O
ATOM 5 O5' C A1730 122.738 146.940 97.721 1.00 56.32 O
ATOM 6 C5' C A1730 121.906 148.064 97.363 1.00 56.69 C
ATOM 7 C4' C A1730 122.189 149.229 98.285 1.00 58.76 C
ATOM 8 O4' C A1730 121.914 148.835 99.658 1.00 57.98 O
ATOM 9 C3' C A1730 123.635 149.710 98.289 1.00 60.85 C
ATOM 10 O3' C A1730 123.651 151.082 98.688 1.00 63.15 O
ATOM 11 C2' C A1730 124.239 148.864 99.403 1.00 60.73 C
ATOM 12 O2' C A1730 125.429 149.400 99.942 1.00 63.84 O
ATOM 13 C1' C A1730 123.101 148.903 100.419 1.00 58.36 C
ATOM 14 N1 C A1730 123.078 147.827 101.426 1.00 56.89 N
ATOM 15 C2 C A1730 123.148 148.181 102.787 1.00 55.55 C
ATOM 16 O2 C A1730 123.299 149.375 103.094 1.00 56.15 O
ATOM 17 N3 C A1730 123.057 147.215 103.728 1.00 53.23 N
ATOM 18 C4 C A1730 122.919 145.941 103.364 1.00 52.51 C
ATOM 19 N4 C A1730 122.804 145.030 104.331 1.00 50.86 N
ATOM 20 C5 C A1730 122.884 145.545 101.990 1.00 53.86 C
ATOM 21 C6 C A1730 122.966 146.511 101.062 1.00 55.17 C
ATOM 22 P G A1731 123.834 152.239 97.589 1.00 64.80 P
ATOM 23 OP1 G A1731 124.833 151.759 96.591 1.00 64.98 O
ATOM 24 OP2 G A1731 124.066 153.520 98.315 1.00 63.72 O
ATOM 25 O5' G A1731 122.413 152.332 96.872 1.00 62.85 O
TER
ATOM 1 O3' U B1728 120.080 141.661 102.509 1.00 47.19 O
ATOM 2 P U B1729 121.552 141.642 101.877 1.00 47.02 P
ATOM 3 OP1 U B1729 121.901 140.231 101.576 1.00 47.17 O
ATOM 4 OP2 U B1729 122.441 142.447 102.736 1.00 47.96 O
ATOM 5 O5' U B1729 121.396 142.419 100.499 1.00 47.28 O
ATOM 6 C5' U B1729 122.484 142.474 99.575 1.00 48.80 C
ATOM 7 C4' U B1729 121.996 142.888 98.211 1.00 51.60 C
ATOM 8 O4' U B1729 121.042 141.905 97.724 1.00 51.95 O
ATOM 9 C3' U B1729 121.301 144.241 98.120 1.00 53.15 C
ATOM 10 O3' U B1729 121.628 144.827 96.863 1.00 56.70 O
ATOM 11 C2' U B1729 119.821 143.859 98.170 1.00 52.33 C
ATOM 12 O2' U B1729 118.947 144.777 97.542 1.00 50.66 O
ATOM 13 C1' U B1729 119.823 142.545 97.396 1.00 51.61 C
ATOM 14 N1 U B1729 118.717 141.643 97.753 1.00 51.05 N
ATOM 15 C2 U B1729 117.827 141.279 96.758 1.00 50.94 C
ATOM 16 O2 U B1729 117.900 141.701 95.610 1.00 50.51 O
ATOM 17 N3 U B1729 116.841 140.405 97.160 1.00 51.07 N
ATOM 18 C4 U B1729 116.653 139.884 98.431 1.00 50.86 C
ATOM 19 O4 U B1729 115.742 139.078 98.638 1.00 49.29 O
ATOM 20 C5 U B1729 117.598 140.330 99.395 1.00 51.37 C
ATOM 21 C6 U B1729 118.574 141.168 99.035 1.00 51.38 C
ATOM 22 P C B1730 122.961 145.716 96.720 1.00 56.92 P
ATOM 23 OP1 C B1730 123.013 146.222 95.322 1.00 56.63 O
ATOM 24 OP2 C B1730 124.076 144.889 97.241 1.00 57.72 O
ATOM 25 O5' C B1730 122.738 146.940 97.721 1.00 56.32 O
TER
ATOM 2 P C A1730 122.961 145.716 96.720 1.00 56.92 P
ATOM 3 OP1 C A1730 123.013 146.222 95.322 1.00 56.63 O
ATOM 4 OP2 C A1730 124.076 144.889 97.241 1.00 57.72 O
ATOM 5 O5' C A1730 122.738 146.940 97.721 1.00 56.32 O
ATOM 6 C5' C A1730 121.906 148.064 97.363 1.00 56.69 C
ATOM 7 C4' C A1730 122.189 149.229 98.285 1.00 58.76 C
ATOM 8 O4' C A1730 121.914 148.835 99.658 1.00 57.98 O
ATOM 9 C3' C A1730 123.635 149.710 98.289 1.00 60.85 C
ATOM 10 O3' C A1730 123.651 151.082 98.688 1.00 63.15 O
ATOM 11 C2' C A1730 124.239 148.864 99.403 1.00 60.73 C
ATOM 12 O2' C A1730 125.429 149.400 99.942 1.00 63.84 O
ATOM 13 C1' C A1730 123.101 148.903 100.419 1.00 58.36 C
ATOM 14 N1 C A1730 123.078 147.827 101.426 1.00 56.89 N
ATOM 15 C2 C A1730 123.148 148.181 102.787 1.00 55.55 C
ATOM 16 O2 C A1730 123.299 149.375 103.094 1.00 56.15 O
ATOM 17 N3 C A1730 123.057 147.215 103.728 1.00 53.23 N
ATOM 18 C4 C A1730 122.919 145.941 103.364 1.00 52.51 C
ATOM 19 N4 C A1730 122.804 145.030 104.331 1.00 50.86 N
ATOM 20 C5 C A1730 122.884 145.545 101.990 1.00 53.86 C
ATOM 21 C6 C A1730 122.966 146.511 101.062 1.00 55.17 C
ATOM 22 P G A1731 123.834 152.239 97.589 1.00 64.80 P
ATOM 23 OP1 G A1731 124.833 151.759 96.591 1.00 64.98 O
ATOM 24 OP2 G A1731 124.066 153.520 98.315 1.00 63.72 O
ATOM 25 O5' G A1731 122.413 152.332 96.872 1.00 62.85 O
TER
ATOM 1 O3' U B1728 120.080 141.661 102.509 1.00 47.19 O
ATOM 2 P U B1729 121.552 141.642 101.877 1.00 47.02 P
ATOM 3 OP1 U B1729 121.901 140.231 101.576 1.00 47.17 O
ATOM 4 OP2 U B1729 122.441 142.447 102.736 1.00 47.96 O
ATOM 5 O5' U B1729 121.396 142.419 100.499 1.00 47.28 O
ATOM 6 C5' U B1729 122.484 142.474 99.575 1.00 48.80 C
ATOM 7 C4' U B1729 121.996 142.888 98.211 1.00 51.60 C
ATOM 8 O4' U B1729 121.042 141.905 97.724 1.00 51.95 O
ATOM 9 C3' U B1729 121.301 144.241 98.120 1.00 53.15 C
ATOM 10 O3' U B1729 121.628 144.827 96.863 1.00 56.70 O
ATOM 11 C2' U B1729 119.821 143.859 98.170 1.00 52.33 C
ATOM 12 O2' U B1729 118.947 144.777 97.542 1.00 50.66 O
ATOM 13 C1' U B1729 119.823 142.545 97.396 1.00 51.61 C
ATOM 14 N1 U B1729 118.717 141.643 97.753 1.00 51.05 N
ATOM 15 C2 U B1729 117.827 141.279 96.758 1.00 50.94 C
ATOM 16 O2 U B1729 117.900 141.701 95.610 1.00 50.51 O
ATOM 17 N3 U B1729 116.841 140.405 97.160 1.00 51.07 N
ATOM 18 C4 U B1729 116.653 139.884 98.431 1.00 50.86 C
ATOM 19 O4 U B1729 115.742 139.078 98.638 1.00 49.29 O
ATOM 20 C5 U B1729 117.598 140.330 99.395 1.00 51.37 C
ATOM 21 C6 U B1729 118.574 141.168 99.035 1.00 51.38 C
ATOM 22 P C B1730 122.961 145.716 96.720 1.00 56.92 P
ATOM 23 OP1 C B1730 123.013 146.222 95.322 1.00 56.63 O
ATOM 24 OP2 C B1730 124.076 144.889 97.241 1.00 57.72 O
ATOM 25 O5' C B1730 122.738 146.940 97.721 1.00 56.32 O
TER
Atoms:
C2: (123.148,148.181,102.787)
OP1: (123.013,146.222,95.322)
OP2: (124.076,144.889,97.241)
C4: (122.919,145.941,103.364)
O5': (122.738,146.940,97.721)
C3': (123.635,149.710,98.289)
C1': (123.101,148.903,100.419)
O4': (121.914,148.835,99.658)
C5': (121.906,148.064,97.363)
P: (122.961,145.716,96.720)
O2: (123.299,149.375,103.094)
C4': (122.189,149.229,98.285)
C2': (124.239,148.864,99.403)
O2': (125.429,149.400,99.942)
N1: (123.078,147.827,101.426)
N3: (123.057,147.215,103.728)
N4: (122.804,145.030,104.331)
C6: (122.966,146.511,101.062)
C5: (122.884,145.545,101.990)
O3': (123.651,151.082,98.688)
OP1: (123.013,146.222,95.322)
OP2: (124.076,144.889,97.241)
C4: (122.919,145.941,103.364)
O5': (122.738,146.940,97.721)
C3': (123.635,149.710,98.289)
C1': (123.101,148.903,100.419)
O4': (121.914,148.835,99.658)
C5': (121.906,148.064,97.363)
P: (122.961,145.716,96.720)
O2: (123.299,149.375,103.094)
C4': (122.189,149.229,98.285)
C2': (124.239,148.864,99.403)
O2': (125.429,149.400,99.942)
N1: (123.078,147.827,101.426)
N3: (123.057,147.215,103.728)
N4: (122.804,145.030,104.331)
C6: (122.966,146.511,101.062)
C5: (122.884,145.545,101.990)
O3': (123.651,151.082,98.688)
C4: (116.653,139.884,98.431)
N3: (116.841,140.405,97.160)
OP1: (121.901,140.231,101.576)
OP2: (122.441,142.447,102.736)
C2: (117.827,141.279,96.758)
C1': (119.823,142.545,97.396)
C3': (121.301,144.241,98.120)
O5': (121.396,142.419,100.499)
O4': (121.042,141.905,97.724)
C5': (122.484,142.474,99.575)
P: (121.552,141.642,101.877)
C4': (121.996,142.888,98.211)
C2': (119.821,143.859,98.170)
O2': (118.947,144.777,97.542)
N1: (118.717,141.643,97.753)
O4: (115.742,139.078,98.638)
O2: (117.900,141.701,95.610)
C6: (118.574,141.168,99.035)
C5: (117.598,140.330,99.395)
O3': (121.628,144.827,96.863)
N3: (116.841,140.405,97.160)
OP1: (121.901,140.231,101.576)
OP2: (122.441,142.447,102.736)
C2: (117.827,141.279,96.758)
C1': (119.823,142.545,97.396)
C3': (121.301,144.241,98.120)
O5': (121.396,142.419,100.499)
O4': (121.042,141.905,97.724)
C5': (122.484,142.474,99.575)
P: (121.552,141.642,101.877)
C4': (121.996,142.888,98.211)
C2': (119.821,143.859,98.170)
O2': (118.947,144.777,97.542)
N1: (118.717,141.643,97.753)
O4: (115.742,139.078,98.638)
O2: (117.900,141.701,95.610)
C6: (118.574,141.168,99.035)
C5: (117.598,140.330,99.395)
O3': (121.628,144.827,96.863)
Image (generated by PyMOL):