Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6129:6128
Extra
PDB:
ATOM 1 O3' U A 128 214.876 115.790 231.515 1.00101.50 O
ATOM 2 P C A 129 213.787 116.114 230.380 1.00103.87 P
ATOM 3 OP1 C A 129 212.777 115.039 230.410 1.00102.87 O
ATOM 4 OP2 C A 129 214.528 116.351 229.128 1.00104.48 O
ATOM 5 O5' C A 129 213.146 117.480 230.896 1.00104.70 O
ATOM 6 C5' C A 129 212.368 117.520 232.084 1.00104.36 C
ATOM 7 C4' C A 129 212.082 118.939 232.512 1.00105.34 C
ATOM 8 O4' C A 129 213.325 119.629 232.785 1.00106.06 O
ATOM 9 C3' C A 129 211.387 119.812 231.484 1.00106.10 C
ATOM 10 O3' C A 129 209.985 119.616 231.461 1.00105.73 O
ATOM 11 C2' C A 129 211.807 121.230 231.886 1.00107.23 C
ATOM 12 O2' C A 129 210.986 121.740 232.935 1.00107.32 O
ATOM 13 C1' C A 129 213.212 120.996 232.436 1.00107.20 C
ATOM 14 N1 C A 129 214.265 121.319 231.445 1.00107.86 N
ATOM 15 C2 C A 129 214.600 122.658 231.120 1.00109.09 C
ATOM 16 O2 C A 129 214.002 123.618 231.645 1.00109.66 O
ATOM 17 N3 C A 129 215.590 122.879 230.207 1.00109.68 N
ATOM 18 C4 C A 129 216.234 121.850 229.635 1.00109.11 C
ATOM 19 N4 C A 129 217.194 122.109 228.743 1.00109.76 N
ATOM 20 C5 C A 129 215.916 120.496 229.954 1.00107.86 C
ATOM 21 C6 C A 129 214.941 120.278 230.854 1.00107.27 C
ATOM 22 P C A 130 209.201 119.518 230.063 1.00127.93 P
ATOM 23 OP1 C A 130 207.771 119.333 230.387 1.00127.53 O
ATOM 24 OP2 C A 130 209.889 118.490 229.245 1.00127.40 O
ATOM 25 O5' C A 130 209.428 120.959 229.426 1.00129.24 O
TER
ATOM 1 O3' U B 127 220.767 117.532 229.591 1.00 88.07 O
ATOM 2 P U B 128 219.641 118.579 230.084 1.00105.10 P
ATOM 3 OP1 U B 128 219.191 119.337 228.883 1.00105.86 O
ATOM 4 OP2 U B 128 220.204 119.339 231.239 1.00105.63 O
ATOM 5 O5' U B 128 218.476 117.633 230.598 1.00103.94 O
ATOM 6 C5' U B 128 218.129 116.446 229.920 1.00103.07 C
ATOM 7 C4' U B 128 217.155 115.643 230.735 1.00102.04 C
ATOM 8 O4' U B 128 217.886 114.873 231.721 1.00101.43 O
ATOM 9 C3' U B 128 216.130 116.468 231.516 1.00102.29 C
ATOM 10 O3' U B 128 214.876 115.790 231.515 1.00101.50 O
ATOM 11 C2' U B 128 216.704 116.483 232.932 1.00102.17 C
ATOM 12 O2' U B 128 215.746 116.648 233.947 1.00101.92 O
ATOM 13 C1' U B 128 217.355 115.116 233.007 1.00101.26 C
ATOM 14 N1 U B 128 218.458 115.003 234.001 1.00101.28 N
ATOM 15 C2 U B 128 218.294 114.046 234.991 1.00100.38 C
ATOM 16 O2 U B 128 217.299 113.368 235.050 1.00 99.63 O
ATOM 17 N3 U B 128 219.295 113.888 235.913 1.00100.39 N
ATOM 18 C4 U B 128 220.464 114.610 235.938 1.00101.25 C
ATOM 19 O4 U B 128 221.287 114.367 236.830 1.00101.19 O
ATOM 20 C5 U B 128 220.585 115.592 234.882 1.00102.17 C
ATOM 21 C6 U B 128 219.612 115.755 233.965 1.00102.16 C
ATOM 22 P C B 129 213.787 116.114 230.380 1.00103.87 P
ATOM 23 OP1 C B 129 212.777 115.039 230.410 1.00102.87 O
ATOM 24 OP2 C B 129 214.528 116.351 229.128 1.00104.48 O
ATOM 25 O5' C B 129 213.146 117.480 230.896 1.00104.70 O
TER
ATOM 2 P C A 129 213.787 116.114 230.380 1.00103.87 P
ATOM 3 OP1 C A 129 212.777 115.039 230.410 1.00102.87 O
ATOM 4 OP2 C A 129 214.528 116.351 229.128 1.00104.48 O
ATOM 5 O5' C A 129 213.146 117.480 230.896 1.00104.70 O
ATOM 6 C5' C A 129 212.368 117.520 232.084 1.00104.36 C
ATOM 7 C4' C A 129 212.082 118.939 232.512 1.00105.34 C
ATOM 8 O4' C A 129 213.325 119.629 232.785 1.00106.06 O
ATOM 9 C3' C A 129 211.387 119.812 231.484 1.00106.10 C
ATOM 10 O3' C A 129 209.985 119.616 231.461 1.00105.73 O
ATOM 11 C2' C A 129 211.807 121.230 231.886 1.00107.23 C
ATOM 12 O2' C A 129 210.986 121.740 232.935 1.00107.32 O
ATOM 13 C1' C A 129 213.212 120.996 232.436 1.00107.20 C
ATOM 14 N1 C A 129 214.265 121.319 231.445 1.00107.86 N
ATOM 15 C2 C A 129 214.600 122.658 231.120 1.00109.09 C
ATOM 16 O2 C A 129 214.002 123.618 231.645 1.00109.66 O
ATOM 17 N3 C A 129 215.590 122.879 230.207 1.00109.68 N
ATOM 18 C4 C A 129 216.234 121.850 229.635 1.00109.11 C
ATOM 19 N4 C A 129 217.194 122.109 228.743 1.00109.76 N
ATOM 20 C5 C A 129 215.916 120.496 229.954 1.00107.86 C
ATOM 21 C6 C A 129 214.941 120.278 230.854 1.00107.27 C
ATOM 22 P C A 130 209.201 119.518 230.063 1.00127.93 P
ATOM 23 OP1 C A 130 207.771 119.333 230.387 1.00127.53 O
ATOM 24 OP2 C A 130 209.889 118.490 229.245 1.00127.40 O
ATOM 25 O5' C A 130 209.428 120.959 229.426 1.00129.24 O
TER
ATOM 1 O3' U B 127 220.767 117.532 229.591 1.00 88.07 O
ATOM 2 P U B 128 219.641 118.579 230.084 1.00105.10 P
ATOM 3 OP1 U B 128 219.191 119.337 228.883 1.00105.86 O
ATOM 4 OP2 U B 128 220.204 119.339 231.239 1.00105.63 O
ATOM 5 O5' U B 128 218.476 117.633 230.598 1.00103.94 O
ATOM 6 C5' U B 128 218.129 116.446 229.920 1.00103.07 C
ATOM 7 C4' U B 128 217.155 115.643 230.735 1.00102.04 C
ATOM 8 O4' U B 128 217.886 114.873 231.721 1.00101.43 O
ATOM 9 C3' U B 128 216.130 116.468 231.516 1.00102.29 C
ATOM 10 O3' U B 128 214.876 115.790 231.515 1.00101.50 O
ATOM 11 C2' U B 128 216.704 116.483 232.932 1.00102.17 C
ATOM 12 O2' U B 128 215.746 116.648 233.947 1.00101.92 O
ATOM 13 C1' U B 128 217.355 115.116 233.007 1.00101.26 C
ATOM 14 N1 U B 128 218.458 115.003 234.001 1.00101.28 N
ATOM 15 C2 U B 128 218.294 114.046 234.991 1.00100.38 C
ATOM 16 O2 U B 128 217.299 113.368 235.050 1.00 99.63 O
ATOM 17 N3 U B 128 219.295 113.888 235.913 1.00100.39 N
ATOM 18 C4 U B 128 220.464 114.610 235.938 1.00101.25 C
ATOM 19 O4 U B 128 221.287 114.367 236.830 1.00101.19 O
ATOM 20 C5 U B 128 220.585 115.592 234.882 1.00102.17 C
ATOM 21 C6 U B 128 219.612 115.755 233.965 1.00102.16 C
ATOM 22 P C B 129 213.787 116.114 230.380 1.00103.87 P
ATOM 23 OP1 C B 129 212.777 115.039 230.410 1.00102.87 O
ATOM 24 OP2 C B 129 214.528 116.351 229.128 1.00104.48 O
ATOM 25 O5' C B 129 213.146 117.480 230.896 1.00104.70 O
TER
Atoms:
C2: (214.600,122.658,231.120)
OP1: (212.777,115.039,230.410)
OP2: (214.528,116.351,229.128)
C4: (216.234,121.850,229.635)
O5': (213.146,117.480,230.896)
C3': (211.387,119.812,231.484)
C1': (213.212,120.996,232.436)
O4': (213.325,119.629,232.785)
C5': (212.368,117.520,232.084)
P: (213.787,116.114,230.380)
O2: (214.002,123.618,231.645)
C4': (212.082,118.939,232.512)
C2': (211.807,121.230,231.886)
O2': (210.986,121.740,232.935)
N1: (214.265,121.319,231.445)
N3: (215.590,122.879,230.207)
N4: (217.194,122.109,228.743)
C6: (214.941,120.278,230.854)
C5: (215.916,120.496,229.954)
O3': (209.985,119.616,231.461)
OP1: (212.777,115.039,230.410)
OP2: (214.528,116.351,229.128)
C4: (216.234,121.850,229.635)
O5': (213.146,117.480,230.896)
C3': (211.387,119.812,231.484)
C1': (213.212,120.996,232.436)
O4': (213.325,119.629,232.785)
C5': (212.368,117.520,232.084)
P: (213.787,116.114,230.380)
O2: (214.002,123.618,231.645)
C4': (212.082,118.939,232.512)
C2': (211.807,121.230,231.886)
O2': (210.986,121.740,232.935)
N1: (214.265,121.319,231.445)
N3: (215.590,122.879,230.207)
N4: (217.194,122.109,228.743)
C6: (214.941,120.278,230.854)
C5: (215.916,120.496,229.954)
O3': (209.985,119.616,231.461)
C4: (220.464,114.610,235.938)
N3: (219.295,113.888,235.913)
OP1: (219.191,119.337,228.883)
OP2: (220.204,119.339,231.239)
C2: (218.294,114.046,234.991)
C1': (217.355,115.116,233.007)
C3': (216.130,116.468,231.516)
O5': (218.476,117.633,230.598)
O4': (217.886,114.873,231.721)
C5': (218.129,116.446,229.920)
P: (219.641,118.579,230.084)
C4': (217.155,115.643,230.735)
C2': (216.704,116.483,232.932)
O2': (215.746,116.648,233.947)
N1: (218.458,115.003,234.001)
O4: (221.287,114.367,236.830)
O2: (217.299,113.368,235.050)
C6: (219.612,115.755,233.965)
C5: (220.585,115.592,234.882)
O3': (214.876,115.790,231.515)
N3: (219.295,113.888,235.913)
OP1: (219.191,119.337,228.883)
OP2: (220.204,119.339,231.239)
C2: (218.294,114.046,234.991)
C1': (217.355,115.116,233.007)
C3': (216.130,116.468,231.516)
O5': (218.476,117.633,230.598)
O4': (217.886,114.873,231.721)
C5': (218.129,116.446,229.920)
P: (219.641,118.579,230.084)
C4': (217.155,115.643,230.735)
C2': (216.704,116.483,232.932)
O2': (215.746,116.648,233.947)
N1: (218.458,115.003,234.001)
O4: (221.287,114.367,236.830)
O2: (217.299,113.368,235.050)
C6: (219.612,115.755,233.965)
C5: (220.585,115.592,234.882)
O3': (214.876,115.790,231.515)
Image (generated by PyMOL):