Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 2 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 3 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 4 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 5 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
ATOM 6 C5' C A1088 42.277 105.086 120.237 1.00 54.07 C
ATOM 7 C4' C A1088 41.672 103.875 120.902 1.00 54.76 C
ATOM 8 O4' C A1088 41.387 102.863 119.902 1.00 52.03 O
ATOM 9 C3' C A1088 42.548 103.157 121.914 1.00 56.20 C
ATOM 10 O3' C A1088 42.509 103.792 123.187 1.00 60.36 O
ATOM 11 C2' C A1088 41.913 101.772 121.949 1.00 55.58 C
ATOM 12 O2' C A1088 40.742 101.716 122.740 1.00 56.78 O
ATOM 13 C1' C A1088 41.533 101.575 120.477 1.00 52.52 C
ATOM 14 N1 C A1088 42.537 100.814 119.707 1.00 51.11 N
ATOM 15 C2 C A1088 42.651 99.439 119.935 1.00 50.20 C
ATOM 16 O2 C A1088 41.900 98.901 120.761 1.00 53.01 O
ATOM 17 N3 C A1088 43.572 98.730 119.257 1.00 49.70 N
ATOM 18 C4 C A1088 44.368 99.333 118.380 1.00 49.00 C
ATOM 19 N4 C A1088 45.279 98.582 117.757 1.00 46.83 N
ATOM 20 C5 C A1088 44.270 100.729 118.111 1.00 50.19 C
ATOM 21 C6 C A1088 43.350 101.426 118.792 1.00 50.48 C
ATOM 22 P U A1089 43.818 104.545 123.749 1.00 65.45 P
ATOM 23 OP1 U A1089 43.559 104.946 125.158 1.00 64.73 O
ATOM 24 OP2 U A1089 44.229 105.572 122.756 1.00 66.74 O
ATOM 25 O5' U A1089 44.934 103.419 123.782 1.00 67.27 O
TER
ATOM 1 O3' C B1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 2 P U B1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U B1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U B1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U B1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U B1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U B1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U B1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U B1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U B1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U B1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U B1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U B1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U B1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U B1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U B1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U B1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U B1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U B1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U B1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U B1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C B1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C B1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C B1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C B1088 43.548 104.755 119.654 1.00 55.35 O
TER
ATOM 2 P C A1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 3 OP1 C A1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 4 OP2 C A1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 5 O5' C A1088 43.548 104.755 119.654 1.00 55.35 O
ATOM 6 C5' C A1088 42.277 105.086 120.237 1.00 54.07 C
ATOM 7 C4' C A1088 41.672 103.875 120.902 1.00 54.76 C
ATOM 8 O4' C A1088 41.387 102.863 119.902 1.00 52.03 O
ATOM 9 C3' C A1088 42.548 103.157 121.914 1.00 56.20 C
ATOM 10 O3' C A1088 42.509 103.792 123.187 1.00 60.36 O
ATOM 11 C2' C A1088 41.913 101.772 121.949 1.00 55.58 C
ATOM 12 O2' C A1088 40.742 101.716 122.740 1.00 56.78 O
ATOM 13 C1' C A1088 41.533 101.575 120.477 1.00 52.52 C
ATOM 14 N1 C A1088 42.537 100.814 119.707 1.00 51.11 N
ATOM 15 C2 C A1088 42.651 99.439 119.935 1.00 50.20 C
ATOM 16 O2 C A1088 41.900 98.901 120.761 1.00 53.01 O
ATOM 17 N3 C A1088 43.572 98.730 119.257 1.00 49.70 N
ATOM 18 C4 C A1088 44.368 99.333 118.380 1.00 49.00 C
ATOM 19 N4 C A1088 45.279 98.582 117.757 1.00 46.83 N
ATOM 20 C5 C A1088 44.270 100.729 118.111 1.00 50.19 C
ATOM 21 C6 C A1088 43.350 101.426 118.792 1.00 50.48 C
ATOM 22 P U A1089 43.818 104.545 123.749 1.00 65.45 P
ATOM 23 OP1 U A1089 43.559 104.946 125.158 1.00 64.73 O
ATOM 24 OP2 U A1089 44.229 105.572 122.756 1.00 66.74 O
ATOM 25 O5' U A1089 44.934 103.419 123.782 1.00 67.27 O
TER
ATOM 1 O3' C B1086 49.251 101.371 115.323 1.00 51.31 O
ATOM 2 P U B1087 48.046 101.089 116.359 1.00 50.59 P
ATOM 3 OP1 U B1087 48.607 101.104 117.731 1.00 52.01 O
ATOM 4 OP2 U B1087 47.327 99.884 115.882 1.00 48.27 O
ATOM 5 O5' U B1087 47.104 102.362 116.222 1.00 49.70 O
ATOM 6 C5' U B1087 47.577 103.665 116.581 1.00 49.79 C
ATOM 7 C4' U B1087 46.486 104.686 116.388 1.00 52.24 C
ATOM 8 O4' U B1087 46.199 104.825 114.966 1.00 53.61 O
ATOM 9 C3' U B1087 45.152 104.354 117.054 1.00 53.33 C
ATOM 10 O3' U B1087 44.541 105.552 117.491 1.00 54.30 O
ATOM 11 C2' U B1087 44.340 103.781 115.900 1.00 53.74 C
ATOM 12 O2' U B1087 42.946 103.888 116.082 1.00 55.06 O
ATOM 13 C1' U B1087 44.811 104.674 114.760 1.00 52.79 C
ATOM 14 N1 U B1087 44.568 104.175 113.398 1.00 52.12 N
ATOM 15 C2 U B1087 44.027 105.070 112.483 1.00 51.63 C
ATOM 16 O2 U B1087 43.761 106.228 112.757 1.00 50.61 O
ATOM 17 N3 U B1087 43.807 104.558 111.233 1.00 51.85 N
ATOM 18 C4 U B1087 44.057 103.277 110.806 1.00 52.55 C
ATOM 19 O4 U B1087 43.796 102.976 109.643 1.00 54.71 O
ATOM 20 C5 U B1087 44.615 102.408 111.802 1.00 52.13 C
ATOM 21 C6 U B1087 44.851 102.877 113.032 1.00 52.27 C
ATOM 22 P C B1088 44.497 105.888 119.055 1.00 56.22 P
ATOM 23 OP1 C B1088 43.823 107.208 119.221 1.00 56.73 O
ATOM 24 OP2 C B1088 45.872 105.695 119.589 1.00 55.32 O
ATOM 25 O5' C B1088 43.548 104.755 119.654 1.00 55.35 O
TER
Atoms:
C2: (42.651,99.439,119.935)
OP1: (43.823,107.208,119.221)
OP2: (45.872,105.695,119.589)
C4: (44.368,99.333,118.380)
O5': (43.548,104.755,119.654)
C3': (42.548,103.157,121.914)
C1': (41.533,101.575,120.477)
O4': (41.387,102.863,119.902)
C5': (42.277,105.086,120.237)
P: (44.497,105.888,119.055)
O2: (41.900,98.901,120.761)
C4': (41.672,103.875,120.902)
C2': (41.913,101.772,121.949)
O2': (40.742,101.716,122.740)
N1: (42.537,100.814,119.707)
N3: (43.572,98.730,119.257)
N4: (45.279,98.582,117.757)
C6: (43.350,101.426,118.792)
C5: (44.270,100.729,118.111)
O3': (42.509,103.792,123.187)
OP1: (43.823,107.208,119.221)
OP2: (45.872,105.695,119.589)
C4: (44.368,99.333,118.380)
O5': (43.548,104.755,119.654)
C3': (42.548,103.157,121.914)
C1': (41.533,101.575,120.477)
O4': (41.387,102.863,119.902)
C5': (42.277,105.086,120.237)
P: (44.497,105.888,119.055)
O2: (41.900,98.901,120.761)
C4': (41.672,103.875,120.902)
C2': (41.913,101.772,121.949)
O2': (40.742,101.716,122.740)
N1: (42.537,100.814,119.707)
N3: (43.572,98.730,119.257)
N4: (45.279,98.582,117.757)
C6: (43.350,101.426,118.792)
C5: (44.270,100.729,118.111)
O3': (42.509,103.792,123.187)
C4: (44.057,103.277,110.806)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
N3: (43.807,104.558,111.233)
OP1: (48.607,101.104,117.731)
OP2: (47.327,99.884,115.882)
C2: (44.027,105.070,112.483)
C1': (44.811,104.674,114.760)
C3': (45.152,104.354,117.054)
O5': (47.104,102.362,116.222)
O4': (46.199,104.825,114.966)
C5': (47.577,103.665,116.581)
P: (48.046,101.089,116.359)
C4': (46.486,104.686,116.388)
C2': (44.340,103.781,115.900)
O2': (42.946,103.888,116.082)
N1: (44.568,104.175,113.398)
O4: (43.796,102.976,109.643)
O2: (43.761,106.228,112.757)
C6: (44.851,102.877,113.032)
C5: (44.615,102.408,111.802)
O3': (44.541,105.552,117.491)
Image (generated by PyMOL):