Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01433:01432
Extra
PDB:
ATOM 1 O3' U A1432 82.883 134.836 44.536 1.00 36.29 O
ATOM 2 P C A1433 84.394 135.088 45.018 1.00 35.85 P
ATOM 3 OP1 C A1433 84.391 136.388 45.727 1.00 40.64 O
ATOM 4 OP2 C A1433 85.323 134.877 43.891 1.00 36.27 O
ATOM 5 O5' C A1433 84.657 133.993 46.138 1.00 34.71 O
ATOM 6 C5' C A1433 84.446 132.621 45.869 1.00 32.22 C
ATOM 7 C4' C A1433 85.246 131.765 46.814 1.00 31.04 C
ATOM 8 O4' C A1433 85.227 130.434 46.234 1.00 32.17 O
ATOM 9 C3' C A1433 86.725 132.127 46.965 1.00 32.54 C
ATOM 10 O3' C A1433 86.966 132.880 48.167 1.00 33.22 O
ATOM 11 C2' C A1433 87.412 130.763 46.971 1.00 30.69 C
ATOM 12 O2' C A1433 87.304 130.092 48.209 1.00 30.34 O
ATOM 13 C1' C A1433 86.545 130.004 45.975 1.00 29.24 C
ATOM 14 N1 C A1433 86.854 130.259 44.556 1.00 27.86 N
ATOM 15 C2 C A1433 87.988 129.664 44.002 1.00 27.30 C
ATOM 16 O2 C A1433 88.717 128.990 44.726 1.00 27.54 O
ATOM 17 N3 C A1433 88.265 129.848 42.692 1.00 27.91 N
ATOM 18 C4 C A1433 87.464 130.610 41.942 1.00 29.11 C
ATOM 19 N4 C A1433 87.770 130.763 40.651 1.00 28.39 N
ATOM 20 C5 C A1433 86.310 131.249 42.485 1.00 30.66 C
ATOM 21 C6 C A1433 86.045 131.049 43.784 1.00 28.34 C
ATOM 22 P G A1434 88.349 133.702 48.354 1.00 32.05 P
ATOM 23 OP1 G A1434 88.442 134.098 49.777 1.00 31.37 O
ATOM 24 OP2 G A1434 88.418 134.745 47.303 1.00 31.95 O
ATOM 25 O5' G A1434 89.501 132.640 48.066 1.00 32.59 O
TER
ATOM 1 O3' C B1431 83.209 131.804 39.081 1.00 36.38 O
ATOM 2 P U B1432 84.147 133.097 39.284 1.00 35.32 P
ATOM 3 OP1 U B1432 83.683 134.027 38.226 1.00 36.26 O
ATOM 4 OP2 U B1432 85.584 132.694 39.353 1.00 31.46 O
ATOM 5 O5' U B1432 83.709 133.717 40.683 1.00 31.27 O
ATOM 6 C5' U B1432 82.342 134.071 40.904 1.00 33.47 C
ATOM 7 C4' U B1432 82.161 134.730 42.251 1.00 34.21 C
ATOM 8 O4' U B1432 80.736 134.954 42.428 1.00 35.31 O
ATOM 9 C3' U B1432 82.602 133.925 43.471 1.00 35.09 C
ATOM 10 O3' U B1432 82.883 134.836 44.536 1.00 36.29 O
ATOM 11 C2' U B1432 81.336 133.144 43.806 1.00 35.74 C
ATOM 12 O2' U B1432 81.255 132.740 45.157 1.00 36.61 O
ATOM 13 C1' U B1432 80.262 134.188 43.513 1.00 35.48 C
ATOM 14 N1 U B1432 78.962 133.616 43.142 1.00 35.92 N
ATOM 15 C2 U B1432 77.897 133.859 43.982 1.00 36.98 C
ATOM 16 O2 U B1432 77.993 134.521 45.003 1.00 37.63 O
ATOM 17 N3 U B1432 76.711 133.294 43.589 1.00 36.15 N
ATOM 18 C4 U B1432 76.492 132.526 42.469 1.00 38.25 C
ATOM 19 O4 U B1432 75.369 132.073 42.263 1.00 41.75 O
ATOM 20 C5 U B1432 77.642 132.318 41.647 1.00 36.83 C
ATOM 21 C6 U B1432 78.808 132.858 42.001 1.00 36.71 C
ATOM 22 P C B1433 84.394 135.088 45.018 1.00 35.85 P
ATOM 23 OP1 C B1433 84.391 136.388 45.727 1.00 40.64 O
ATOM 24 OP2 C B1433 85.323 134.877 43.891 1.00 36.27 O
ATOM 25 O5' C B1433 84.657 133.993 46.138 1.00 34.71 O
TER
ATOM 2 P C A1433 84.394 135.088 45.018 1.00 35.85 P
ATOM 3 OP1 C A1433 84.391 136.388 45.727 1.00 40.64 O
ATOM 4 OP2 C A1433 85.323 134.877 43.891 1.00 36.27 O
ATOM 5 O5' C A1433 84.657 133.993 46.138 1.00 34.71 O
ATOM 6 C5' C A1433 84.446 132.621 45.869 1.00 32.22 C
ATOM 7 C4' C A1433 85.246 131.765 46.814 1.00 31.04 C
ATOM 8 O4' C A1433 85.227 130.434 46.234 1.00 32.17 O
ATOM 9 C3' C A1433 86.725 132.127 46.965 1.00 32.54 C
ATOM 10 O3' C A1433 86.966 132.880 48.167 1.00 33.22 O
ATOM 11 C2' C A1433 87.412 130.763 46.971 1.00 30.69 C
ATOM 12 O2' C A1433 87.304 130.092 48.209 1.00 30.34 O
ATOM 13 C1' C A1433 86.545 130.004 45.975 1.00 29.24 C
ATOM 14 N1 C A1433 86.854 130.259 44.556 1.00 27.86 N
ATOM 15 C2 C A1433 87.988 129.664 44.002 1.00 27.30 C
ATOM 16 O2 C A1433 88.717 128.990 44.726 1.00 27.54 O
ATOM 17 N3 C A1433 88.265 129.848 42.692 1.00 27.91 N
ATOM 18 C4 C A1433 87.464 130.610 41.942 1.00 29.11 C
ATOM 19 N4 C A1433 87.770 130.763 40.651 1.00 28.39 N
ATOM 20 C5 C A1433 86.310 131.249 42.485 1.00 30.66 C
ATOM 21 C6 C A1433 86.045 131.049 43.784 1.00 28.34 C
ATOM 22 P G A1434 88.349 133.702 48.354 1.00 32.05 P
ATOM 23 OP1 G A1434 88.442 134.098 49.777 1.00 31.37 O
ATOM 24 OP2 G A1434 88.418 134.745 47.303 1.00 31.95 O
ATOM 25 O5' G A1434 89.501 132.640 48.066 1.00 32.59 O
TER
ATOM 1 O3' C B1431 83.209 131.804 39.081 1.00 36.38 O
ATOM 2 P U B1432 84.147 133.097 39.284 1.00 35.32 P
ATOM 3 OP1 U B1432 83.683 134.027 38.226 1.00 36.26 O
ATOM 4 OP2 U B1432 85.584 132.694 39.353 1.00 31.46 O
ATOM 5 O5' U B1432 83.709 133.717 40.683 1.00 31.27 O
ATOM 6 C5' U B1432 82.342 134.071 40.904 1.00 33.47 C
ATOM 7 C4' U B1432 82.161 134.730 42.251 1.00 34.21 C
ATOM 8 O4' U B1432 80.736 134.954 42.428 1.00 35.31 O
ATOM 9 C3' U B1432 82.602 133.925 43.471 1.00 35.09 C
ATOM 10 O3' U B1432 82.883 134.836 44.536 1.00 36.29 O
ATOM 11 C2' U B1432 81.336 133.144 43.806 1.00 35.74 C
ATOM 12 O2' U B1432 81.255 132.740 45.157 1.00 36.61 O
ATOM 13 C1' U B1432 80.262 134.188 43.513 1.00 35.48 C
ATOM 14 N1 U B1432 78.962 133.616 43.142 1.00 35.92 N
ATOM 15 C2 U B1432 77.897 133.859 43.982 1.00 36.98 C
ATOM 16 O2 U B1432 77.993 134.521 45.003 1.00 37.63 O
ATOM 17 N3 U B1432 76.711 133.294 43.589 1.00 36.15 N
ATOM 18 C4 U B1432 76.492 132.526 42.469 1.00 38.25 C
ATOM 19 O4 U B1432 75.369 132.073 42.263 1.00 41.75 O
ATOM 20 C5 U B1432 77.642 132.318 41.647 1.00 36.83 C
ATOM 21 C6 U B1432 78.808 132.858 42.001 1.00 36.71 C
ATOM 22 P C B1433 84.394 135.088 45.018 1.00 35.85 P
ATOM 23 OP1 C B1433 84.391 136.388 45.727 1.00 40.64 O
ATOM 24 OP2 C B1433 85.323 134.877 43.891 1.00 36.27 O
ATOM 25 O5' C B1433 84.657 133.993 46.138 1.00 34.71 O
TER
Atoms:
C2: (87.988,129.664,44.002)
OP1: (84.391,136.388,45.727)
OP2: (85.323,134.877,43.891)
C4: (87.464,130.610,41.942)
O5': (84.657,133.993,46.138)
C3': (86.725,132.127,46.965)
C1': (86.545,130.004,45.975)
O4': (85.227,130.434,46.234)
C5': (84.446,132.621,45.869)
P: (84.394,135.088,45.018)
O2: (88.717,128.990,44.726)
C4': (85.246,131.765,46.814)
C2': (87.412,130.763,46.971)
O2': (87.304,130.092,48.209)
N1: (86.854,130.259,44.556)
N3: (88.265,129.848,42.692)
N4: (87.770,130.763,40.651)
C6: (86.045,131.049,43.784)
C5: (86.310,131.249,42.485)
O3': (86.966,132.880,48.167)
OP1: (84.391,136.388,45.727)
OP2: (85.323,134.877,43.891)
C4: (87.464,130.610,41.942)
O5': (84.657,133.993,46.138)
C3': (86.725,132.127,46.965)
C1': (86.545,130.004,45.975)
O4': (85.227,130.434,46.234)
C5': (84.446,132.621,45.869)
P: (84.394,135.088,45.018)
O2: (88.717,128.990,44.726)
C4': (85.246,131.765,46.814)
C2': (87.412,130.763,46.971)
O2': (87.304,130.092,48.209)
N1: (86.854,130.259,44.556)
N3: (88.265,129.848,42.692)
N4: (87.770,130.763,40.651)
C6: (86.045,131.049,43.784)
C5: (86.310,131.249,42.485)
O3': (86.966,132.880,48.167)
C4: (76.492,132.526,42.469)
N3: (76.711,133.294,43.589)
OP1: (83.683,134.027,38.226)
OP2: (85.584,132.694,39.353)
C2: (77.897,133.859,43.982)
C1': (80.262,134.188,43.513)
C3': (82.602,133.925,43.471)
O5': (83.709,133.717,40.683)
O4': (80.736,134.954,42.428)
C5': (82.342,134.071,40.904)
P: (84.147,133.097,39.284)
C4': (82.161,134.730,42.251)
C2': (81.336,133.144,43.806)
O2': (81.255,132.740,45.157)
N1: (78.962,133.616,43.142)
O4: (75.369,132.073,42.263)
O2: (77.993,134.521,45.003)
C6: (78.808,132.858,42.001)
C5: (77.642,132.318,41.647)
O3': (82.883,134.836,44.536)
N3: (76.711,133.294,43.589)
OP1: (83.683,134.027,38.226)
OP2: (85.584,132.694,39.353)
C2: (77.897,133.859,43.982)
C1': (80.262,134.188,43.513)
C3': (82.602,133.925,43.471)
O5': (83.709,133.717,40.683)
O4': (80.736,134.954,42.428)
C5': (82.342,134.071,40.904)
P: (84.147,133.097,39.284)
C4': (82.161,134.730,42.251)
C2': (81.336,133.144,43.806)
O2': (81.255,132.740,45.157)
N1: (78.962,133.616,43.142)
O4: (75.369,132.073,42.263)
O2: (77.993,134.521,45.003)
C6: (78.808,132.858,42.001)
C5: (77.642,132.318,41.647)
O3': (82.883,134.836,44.536)
Image (generated by PyMOL):