Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21288:21287
Extra
PDB:
ATOM 1 O3' U A1287 -87.647 -23.238 84.176 1.00 80.41 O
ATOM 2 P C A1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 3 OP1 C A1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 4 OP2 C A1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 5 O5' C A1288 -87.522 -22.960 86.643 1.00 94.26 O
ATOM 6 C5' C A1288 -86.589 -22.052 87.214 1.00 93.77 C
ATOM 7 C4' C A1288 -86.558 -22.181 88.712 1.00 94.11 C
ATOM 8 O4' C A1288 -87.922 -22.161 89.193 1.00 94.94 O
ATOM 9 C3' C A1288 -85.944 -23.479 89.234 1.00 94.13 C
ATOM 10 O3' C A1288 -85.372 -23.264 90.529 1.00 94.13 O
ATOM 11 C2' C A1288 -87.154 -24.394 89.360 1.00 94.93 C
ATOM 12 O2' C A1288 -87.001 -25.436 90.302 1.00 95.27 O
ATOM 13 C1' C A1288 -88.263 -23.413 89.766 1.00 95.46 C
ATOM 14 N1 C A1288 -89.596 -23.786 89.252 1.00 96.11 N
ATOM 15 C2 C A1288 -90.307 -24.843 89.812 1.00 96.81 C
ATOM 16 O2 C A1288 -89.795 -25.447 90.771 1.00 96.88 O
ATOM 17 N3 C A1288 -91.521 -25.169 89.277 1.00 97.41 N
ATOM 18 C4 C A1288 -92.011 -24.475 88.239 1.00 97.32 C
ATOM 19 N4 C A1288 -93.193 -24.803 87.730 1.00 97.93 N
ATOM 20 C5 C A1288 -91.307 -23.397 87.651 1.00 96.62 C
ATOM 21 C6 C A1288 -90.117 -23.097 88.189 1.00 96.04 C
ATOM 22 P U A1289 -83.776 -23.272 90.735 1.00115.76 P
ATOM 23 OP1 U A1289 -83.335 -21.850 90.759 1.00115.31 O
ATOM 24 OP2 U A1289 -83.202 -24.183 89.709 1.00115.37 O
ATOM 25 O5' U A1289 -83.614 -23.911 92.187 1.00116.18 O
TER
ATOM 1 O3' G B1286 -93.698 -21.407 84.834 1.00 89.42 O
ATOM 2 P U B1287 -93.421 -22.819 84.138 1.00 83.57 P
ATOM 3 OP1 U B1287 -93.943 -22.736 82.737 1.00 83.61 O
ATOM 4 OP2 U B1287 -93.977 -23.853 85.049 1.00 84.22 O
ATOM 5 O5' U B1287 -91.839 -22.927 84.128 1.00 82.67 O
ATOM 6 C5' U B1287 -91.203 -24.136 83.728 1.00 82.38 C
ATOM 7 C4' U B1287 -89.793 -23.901 83.278 1.00 81.48 C
ATOM 8 O4' U B1287 -89.793 -23.437 81.891 1.00 81.16 O
ATOM 9 C3' U B1287 -89.025 -22.850 84.090 1.00 81.08 C
ATOM 10 O3' U B1287 -87.647 -23.238 84.176 1.00 80.41 O
ATOM 11 C2' U B1287 -89.157 -21.601 83.220 1.00 80.83 C
ATOM 12 O2' U B1287 -88.170 -20.618 83.437 1.00 80.22 O
ATOM 13 C1' U B1287 -89.074 -22.211 81.811 1.00 80.61 C
ATOM 14 N1 U B1287 -89.672 -21.362 80.735 1.00 80.67 N
ATOM 15 C2 U B1287 -91.048 -21.249 80.706 1.00 81.42 C
ATOM 16 O2 U B1287 -91.756 -21.815 81.496 1.00 82.01 O
ATOM 17 N3 U B1287 -91.618 -20.457 79.754 1.00 81.53 N
ATOM 18 C4 U B1287 -90.966 -19.745 78.802 1.00 80.96 C
ATOM 19 O4 U B1287 -91.670 -19.086 78.021 1.00 81.21 O
ATOM 20 C5 U B1287 -89.519 -19.891 78.877 1.00 80.17 C
ATOM 21 C6 U B1287 -88.923 -20.663 79.813 1.00 80.04 C
ATOM 22 P C B1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 23 OP1 C B1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 24 OP2 C B1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 25 O5' C B1288 -87.522 -22.960 86.643 1.00 94.26 O
TER
ATOM 2 P C A1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 3 OP1 C A1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 4 OP2 C A1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 5 O5' C A1288 -87.522 -22.960 86.643 1.00 94.26 O
ATOM 6 C5' C A1288 -86.589 -22.052 87.214 1.00 93.77 C
ATOM 7 C4' C A1288 -86.558 -22.181 88.712 1.00 94.11 C
ATOM 8 O4' C A1288 -87.922 -22.161 89.193 1.00 94.94 O
ATOM 9 C3' C A1288 -85.944 -23.479 89.234 1.00 94.13 C
ATOM 10 O3' C A1288 -85.372 -23.264 90.529 1.00 94.13 O
ATOM 11 C2' C A1288 -87.154 -24.394 89.360 1.00 94.93 C
ATOM 12 O2' C A1288 -87.001 -25.436 90.302 1.00 95.27 O
ATOM 13 C1' C A1288 -88.263 -23.413 89.766 1.00 95.46 C
ATOM 14 N1 C A1288 -89.596 -23.786 89.252 1.00 96.11 N
ATOM 15 C2 C A1288 -90.307 -24.843 89.812 1.00 96.81 C
ATOM 16 O2 C A1288 -89.795 -25.447 90.771 1.00 96.88 O
ATOM 17 N3 C A1288 -91.521 -25.169 89.277 1.00 97.41 N
ATOM 18 C4 C A1288 -92.011 -24.475 88.239 1.00 97.32 C
ATOM 19 N4 C A1288 -93.193 -24.803 87.730 1.00 97.93 N
ATOM 20 C5 C A1288 -91.307 -23.397 87.651 1.00 96.62 C
ATOM 21 C6 C A1288 -90.117 -23.097 88.189 1.00 96.04 C
ATOM 22 P U A1289 -83.776 -23.272 90.735 1.00115.76 P
ATOM 23 OP1 U A1289 -83.335 -21.850 90.759 1.00115.31 O
ATOM 24 OP2 U A1289 -83.202 -24.183 89.709 1.00115.37 O
ATOM 25 O5' U A1289 -83.614 -23.911 92.187 1.00116.18 O
TER
ATOM 1 O3' G B1286 -93.698 -21.407 84.834 1.00 89.42 O
ATOM 2 P U B1287 -93.421 -22.819 84.138 1.00 83.57 P
ATOM 3 OP1 U B1287 -93.943 -22.736 82.737 1.00 83.61 O
ATOM 4 OP2 U B1287 -93.977 -23.853 85.049 1.00 84.22 O
ATOM 5 O5' U B1287 -91.839 -22.927 84.128 1.00 82.67 O
ATOM 6 C5' U B1287 -91.203 -24.136 83.728 1.00 82.38 C
ATOM 7 C4' U B1287 -89.793 -23.901 83.278 1.00 81.48 C
ATOM 8 O4' U B1287 -89.793 -23.437 81.891 1.00 81.16 O
ATOM 9 C3' U B1287 -89.025 -22.850 84.090 1.00 81.08 C
ATOM 10 O3' U B1287 -87.647 -23.238 84.176 1.00 80.41 O
ATOM 11 C2' U B1287 -89.157 -21.601 83.220 1.00 80.83 C
ATOM 12 O2' U B1287 -88.170 -20.618 83.437 1.00 80.22 O
ATOM 13 C1' U B1287 -89.074 -22.211 81.811 1.00 80.61 C
ATOM 14 N1 U B1287 -89.672 -21.362 80.735 1.00 80.67 N
ATOM 15 C2 U B1287 -91.048 -21.249 80.706 1.00 81.42 C
ATOM 16 O2 U B1287 -91.756 -21.815 81.496 1.00 82.01 O
ATOM 17 N3 U B1287 -91.618 -20.457 79.754 1.00 81.53 N
ATOM 18 C4 U B1287 -90.966 -19.745 78.802 1.00 80.96 C
ATOM 19 O4 U B1287 -91.670 -19.086 78.021 1.00 81.21 O
ATOM 20 C5 U B1287 -89.519 -19.891 78.877 1.00 80.17 C
ATOM 21 C6 U B1287 -88.923 -20.663 79.813 1.00 80.04 C
ATOM 22 P C B1288 -87.089 -23.969 85.497 1.00 93.94 P
ATOM 23 OP1 C B1288 -85.616 -24.006 85.388 1.00 93.16 O
ATOM 24 OP2 C B1288 -87.816 -25.249 85.646 1.00 94.54 O
ATOM 25 O5' C B1288 -87.522 -22.960 86.643 1.00 94.26 O
TER
Atoms:
C2: (-90.307,-24.843,89.812)
OP1: (-85.616,-24.006,85.388)
OP2: (-87.816,-25.249,85.646)
C4: (-92.011,-24.475,88.239)
O5': (-87.522,-22.960,86.643)
C3': (-85.944,-23.479,89.234)
C1': (-88.263,-23.413,89.766)
O4': (-87.922,-22.161,89.193)
C5': (-86.589,-22.052,87.214)
P: (-87.089,-23.969,85.497)
O2: (-89.795,-25.447,90.771)
C4': (-86.558,-22.181,88.712)
C2': (-87.154,-24.394,89.360)
O2': (-87.001,-25.436,90.302)
N1: (-89.596,-23.786,89.252)
N3: (-91.521,-25.169,89.277)
N4: (-93.193,-24.803,87.730)
C6: (-90.117,-23.097,88.189)
C5: (-91.307,-23.397,87.651)
O3': (-85.372,-23.264,90.529)
OP1: (-85.616,-24.006,85.388)
OP2: (-87.816,-25.249,85.646)
C4: (-92.011,-24.475,88.239)
O5': (-87.522,-22.960,86.643)
C3': (-85.944,-23.479,89.234)
C1': (-88.263,-23.413,89.766)
O4': (-87.922,-22.161,89.193)
C5': (-86.589,-22.052,87.214)
P: (-87.089,-23.969,85.497)
O2: (-89.795,-25.447,90.771)
C4': (-86.558,-22.181,88.712)
C2': (-87.154,-24.394,89.360)
O2': (-87.001,-25.436,90.302)
N1: (-89.596,-23.786,89.252)
N3: (-91.521,-25.169,89.277)
N4: (-93.193,-24.803,87.730)
C6: (-90.117,-23.097,88.189)
C5: (-91.307,-23.397,87.651)
O3': (-85.372,-23.264,90.529)
C4: (-90.966,-19.745,78.802)
N3: (-91.618,-20.457,79.754)
OP1: (-93.943,-22.736,82.737)
OP2: (-93.977,-23.853,85.049)
C2: (-91.048,-21.249,80.706)
C1': (-89.074,-22.211,81.811)
C3': (-89.025,-22.850,84.090)
O5': (-91.839,-22.927,84.128)
O4': (-89.793,-23.437,81.891)
C5': (-91.203,-24.136,83.728)
P: (-93.421,-22.819,84.138)
C4': (-89.793,-23.901,83.278)
C2': (-89.157,-21.601,83.220)
O2': (-88.170,-20.618,83.437)
N1: (-89.672,-21.362,80.735)
O4: (-91.670,-19.086,78.021)
O2: (-91.756,-21.815,81.496)
C6: (-88.923,-20.663,79.813)
C5: (-89.519,-19.891,78.877)
O3': (-87.647,-23.238,84.176)
N3: (-91.618,-20.457,79.754)
OP1: (-93.943,-22.736,82.737)
OP2: (-93.977,-23.853,85.049)
C2: (-91.048,-21.249,80.706)
C1': (-89.074,-22.211,81.811)
C3': (-89.025,-22.850,84.090)
O5': (-91.839,-22.927,84.128)
O4': (-89.793,-23.437,81.891)
C5': (-91.203,-24.136,83.728)
P: (-93.421,-22.819,84.138)
C4': (-89.793,-23.901,83.278)
C2': (-89.157,-21.601,83.220)
O2': (-88.170,-20.618,83.437)
N1: (-89.672,-21.362,80.735)
O4: (-91.670,-19.086,78.021)
O2: (-91.756,-21.815,81.496)
C6: (-88.923,-20.663,79.813)
C5: (-89.519,-19.891,78.877)
O3': (-87.647,-23.238,84.176)
Image (generated by PyMOL):