Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YLS:D34:D33
Extra
PDB:
ATOM 1 O3' U A 33 53.286 30.017 32.475 1.00 20.15 O
ATOM 2 P C A 34 52.004 29.405 33.163 1.00 20.88 P
ATOM 3 OP1 C A 34 51.358 30.458 33.972 1.00 21.09 O
ATOM 4 OP2 C A 34 52.466 28.143 33.794 1.00 21.26 O
ATOM 5 O5' C A 34 51.053 29.052 31.940 1.00 18.47 O
ATOM 6 C5' C A 34 50.376 30.079 31.356 1.00 20.73 C
ATOM 7 C4' C A 34 49.385 29.551 30.341 1.00 22.83 C
ATOM 8 O4' C A 34 49.919 29.713 28.993 1.00 22.92 O
ATOM 9 C3' C A 34 49.044 28.077 30.458 1.00 22.95 C
ATOM 10 O3' C A 34 47.997 27.870 31.376 1.00 21.91 O
ATOM 11 C2' C A 34 48.608 27.789 29.040 1.00 22.31 C
ATOM 12 O2' C A 34 47.311 28.240 28.803 1.00 19.56 O
ATOM 13 C1' C A 34 49.648 28.565 28.251 1.00 21.91 C
ATOM 14 N1 C A 34 50.903 27.840 28.089 1.00 21.33 N
ATOM 15 C2 C A 34 51.016 26.929 27.046 1.00 22.47 C
ATOM 16 O2 C A 34 50.045 26.751 26.303 1.00 24.32 O
ATOM 17 N3 C A 34 52.161 26.272 26.862 1.00 21.58 N
ATOM 18 C4 C A 34 53.164 26.506 27.694 1.00 25.50 C
ATOM 19 N4 C A 34 54.310 25.825 27.531 1.00 27.27 N
ATOM 20 C5 C A 34 53.066 27.445 28.762 1.00 24.83 C
ATOM 21 C6 C A 34 51.918 28.080 28.926 1.00 21.53 C
ATOM 22 P G A 35 47.650 26.395 31.915 1.00 20.97 P
ATOM 23 OP1 G A 35 46.284 26.514 32.505 1.00 23.15 O
ATOM 24 OP2 G A 35 48.794 25.866 32.699 1.00 14.69 O
ATOM 25 O5' G A 35 47.442 25.541 30.585 1.00 21.27 O
TER
ATOM 1 O3' C B 32 57.645 25.374 31.833 1.00 19.79 O
ATOM 2 P U B 33 56.406 25.285 30.918 1.00 23.96 P
ATOM 3 OP1 U B 33 55.505 24.202 31.423 1.00 25.48 O
ATOM 4 OP2 U B 33 56.939 25.215 29.527 1.00 25.81 O
ATOM 5 O5' U B 33 55.674 26.718 31.161 1.00 24.94 O
ATOM 6 C5' U B 33 55.302 27.094 32.525 1.00 22.65 C
ATOM 7 C4' U B 33 55.039 28.574 32.712 1.00 20.20 C
ATOM 8 O4' U B 33 56.205 29.391 32.459 1.00 22.85 O
ATOM 9 C3' U B 33 54.035 29.120 31.775 1.00 20.38 C
ATOM 10 O3' U B 33 53.286 30.017 32.475 1.00 20.15 O
ATOM 11 C2' U B 33 54.871 29.731 30.666 1.00 21.19 C
ATOM 12 O2' U B 33 54.172 30.654 29.875 1.00 23.86 O
ATOM 13 C1' U B 33 55.913 30.389 31.487 1.00 21.87 C
ATOM 14 N1 U B 33 57.181 30.732 30.772 1.00 24.50 N
ATOM 15 C2 U B 33 57.778 32.004 30.902 1.00 25.71 C
ATOM 16 O2 U B 33 57.282 32.935 31.503 1.00 25.15 O
ATOM 17 N3 U B 33 58.989 32.165 30.254 1.00 26.81 N
ATOM 18 C4 U B 33 59.669 31.192 29.530 1.00 27.48 C
ATOM 19 O4 U B 33 60.744 31.453 28.999 1.00 24.83 O
ATOM 20 C5 U B 33 59.011 29.897 29.472 1.00 29.04 C
ATOM 21 C6 U B 33 57.820 29.723 30.084 1.00 26.92 C
ATOM 22 P C B 34 52.004 29.405 33.163 1.00 20.88 P
ATOM 23 OP1 C B 34 51.358 30.458 33.972 1.00 21.09 O
ATOM 24 OP2 C B 34 52.466 28.143 33.794 1.00 21.26 O
ATOM 25 O5' C B 34 51.053 29.052 31.940 1.00 18.47 O
TER
ATOM 2 P C A 34 52.004 29.405 33.163 1.00 20.88 P
ATOM 3 OP1 C A 34 51.358 30.458 33.972 1.00 21.09 O
ATOM 4 OP2 C A 34 52.466 28.143 33.794 1.00 21.26 O
ATOM 5 O5' C A 34 51.053 29.052 31.940 1.00 18.47 O
ATOM 6 C5' C A 34 50.376 30.079 31.356 1.00 20.73 C
ATOM 7 C4' C A 34 49.385 29.551 30.341 1.00 22.83 C
ATOM 8 O4' C A 34 49.919 29.713 28.993 1.00 22.92 O
ATOM 9 C3' C A 34 49.044 28.077 30.458 1.00 22.95 C
ATOM 10 O3' C A 34 47.997 27.870 31.376 1.00 21.91 O
ATOM 11 C2' C A 34 48.608 27.789 29.040 1.00 22.31 C
ATOM 12 O2' C A 34 47.311 28.240 28.803 1.00 19.56 O
ATOM 13 C1' C A 34 49.648 28.565 28.251 1.00 21.91 C
ATOM 14 N1 C A 34 50.903 27.840 28.089 1.00 21.33 N
ATOM 15 C2 C A 34 51.016 26.929 27.046 1.00 22.47 C
ATOM 16 O2 C A 34 50.045 26.751 26.303 1.00 24.32 O
ATOM 17 N3 C A 34 52.161 26.272 26.862 1.00 21.58 N
ATOM 18 C4 C A 34 53.164 26.506 27.694 1.00 25.50 C
ATOM 19 N4 C A 34 54.310 25.825 27.531 1.00 27.27 N
ATOM 20 C5 C A 34 53.066 27.445 28.762 1.00 24.83 C
ATOM 21 C6 C A 34 51.918 28.080 28.926 1.00 21.53 C
ATOM 22 P G A 35 47.650 26.395 31.915 1.00 20.97 P
ATOM 23 OP1 G A 35 46.284 26.514 32.505 1.00 23.15 O
ATOM 24 OP2 G A 35 48.794 25.866 32.699 1.00 14.69 O
ATOM 25 O5' G A 35 47.442 25.541 30.585 1.00 21.27 O
TER
ATOM 1 O3' C B 32 57.645 25.374 31.833 1.00 19.79 O
ATOM 2 P U B 33 56.406 25.285 30.918 1.00 23.96 P
ATOM 3 OP1 U B 33 55.505 24.202 31.423 1.00 25.48 O
ATOM 4 OP2 U B 33 56.939 25.215 29.527 1.00 25.81 O
ATOM 5 O5' U B 33 55.674 26.718 31.161 1.00 24.94 O
ATOM 6 C5' U B 33 55.302 27.094 32.525 1.00 22.65 C
ATOM 7 C4' U B 33 55.039 28.574 32.712 1.00 20.20 C
ATOM 8 O4' U B 33 56.205 29.391 32.459 1.00 22.85 O
ATOM 9 C3' U B 33 54.035 29.120 31.775 1.00 20.38 C
ATOM 10 O3' U B 33 53.286 30.017 32.475 1.00 20.15 O
ATOM 11 C2' U B 33 54.871 29.731 30.666 1.00 21.19 C
ATOM 12 O2' U B 33 54.172 30.654 29.875 1.00 23.86 O
ATOM 13 C1' U B 33 55.913 30.389 31.487 1.00 21.87 C
ATOM 14 N1 U B 33 57.181 30.732 30.772 1.00 24.50 N
ATOM 15 C2 U B 33 57.778 32.004 30.902 1.00 25.71 C
ATOM 16 O2 U B 33 57.282 32.935 31.503 1.00 25.15 O
ATOM 17 N3 U B 33 58.989 32.165 30.254 1.00 26.81 N
ATOM 18 C4 U B 33 59.669 31.192 29.530 1.00 27.48 C
ATOM 19 O4 U B 33 60.744 31.453 28.999 1.00 24.83 O
ATOM 20 C5 U B 33 59.011 29.897 29.472 1.00 29.04 C
ATOM 21 C6 U B 33 57.820 29.723 30.084 1.00 26.92 C
ATOM 22 P C B 34 52.004 29.405 33.163 1.00 20.88 P
ATOM 23 OP1 C B 34 51.358 30.458 33.972 1.00 21.09 O
ATOM 24 OP2 C B 34 52.466 28.143 33.794 1.00 21.26 O
ATOM 25 O5' C B 34 51.053 29.052 31.940 1.00 18.47 O
TER
Atoms:
C2: (51.016,26.929,27.046)
OP1: (51.358,30.458,33.972)
OP2: (52.466,28.143,33.794)
C4: (53.164,26.506,27.694)
O5': (51.053,29.052,31.940)
C3': (49.044,28.077,30.458)
C1': (49.648,28.565,28.251)
O4': (49.919,29.713,28.993)
C5': (50.376,30.079,31.356)
P: (52.004,29.405,33.163)
O2: (50.045,26.751,26.303)
C4': (49.385,29.551,30.341)
C2': (48.608,27.789,29.040)
O2': (47.311,28.240,28.803)
N1: (50.903,27.840,28.089)
N3: (52.161,26.272,26.862)
N4: (54.310,25.825,27.531)
C6: (51.918,28.080,28.926)
C5: (53.066,27.445,28.762)
O3': (47.997,27.870,31.376)
OP1: (51.358,30.458,33.972)
OP2: (52.466,28.143,33.794)
C4: (53.164,26.506,27.694)
O5': (51.053,29.052,31.940)
C3': (49.044,28.077,30.458)
C1': (49.648,28.565,28.251)
O4': (49.919,29.713,28.993)
C5': (50.376,30.079,31.356)
P: (52.004,29.405,33.163)
O2: (50.045,26.751,26.303)
C4': (49.385,29.551,30.341)
C2': (48.608,27.789,29.040)
O2': (47.311,28.240,28.803)
N1: (50.903,27.840,28.089)
N3: (52.161,26.272,26.862)
N4: (54.310,25.825,27.531)
C6: (51.918,28.080,28.926)
C5: (53.066,27.445,28.762)
O3': (47.997,27.870,31.376)
C4: (59.669,31.192,29.530)
N3: (58.989,32.165,30.254)
OP1: (55.505,24.202,31.423)
OP2: (56.939,25.215,29.527)
C2: (57.778,32.004,30.902)
C1': (55.913,30.389,31.487)
C3': (54.035,29.120,31.775)
O5': (55.674,26.718,31.161)
O4': (56.205,29.391,32.459)
C5': (55.302,27.094,32.525)
P: (56.406,25.285,30.918)
C4': (55.039,28.574,32.712)
C2': (54.871,29.731,30.666)
O2': (54.172,30.654,29.875)
N1: (57.181,30.732,30.772)
O4: (60.744,31.453,28.999)
O2: (57.282,32.935,31.503)
C6: (57.820,29.723,30.084)
C5: (59.011,29.897,29.472)
O3': (53.286,30.017,32.475)
N3: (58.989,32.165,30.254)
OP1: (55.505,24.202,31.423)
OP2: (56.939,25.215,29.527)
C2: (57.778,32.004,30.902)
C1': (55.913,30.389,31.487)
C3': (54.035,29.120,31.775)
O5': (55.674,26.718,31.161)
O4': (56.205,29.391,32.459)
C5': (55.302,27.094,32.525)
P: (56.406,25.285,30.918)
C4': (55.039,28.574,32.712)
C2': (54.871,29.731,30.666)
O2': (54.172,30.654,29.875)
N1: (57.181,30.732,30.772)
O4: (60.744,31.453,28.999)
O2: (57.282,32.935,31.503)
C6: (57.820,29.723,30.084)
C5: (59.011,29.897,29.472)
O3': (53.286,30.017,32.475)
Image (generated by PyMOL):