Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VFG:C19:C18
Extra
PDB:
ATOM 1 O3' U A 18 22.185 -46.402 1.754 1.00151.11 O
ATOM 2 P C A 19 22.786 -44.994 1.269 1.00149.83 P
ATOM 3 OP1 C A 19 23.446 -44.365 2.439 1.00149.55 O
ATOM 4 OP2 C A 19 21.688 -44.273 0.562 1.00149.87 O
ATOM 5 O5' C A 19 23.891 -45.379 0.183 1.00149.28 O
ATOM 6 C5' C A 19 25.216 -44.837 0.238 1.00148.73 C
ATOM 7 C4' C A 19 25.462 -43.923 -0.948 1.00148.48 C
ATOM 8 O4' C A 19 25.215 -44.659 -2.176 1.00148.06 O
ATOM 9 C3' C A 19 24.566 -42.694 -1.033 1.00148.60 C
ATOM 10 O3' C A 19 25.162 -41.618 -0.296 1.00148.43 O
ATOM 11 C2' C A 19 24.571 -42.397 -2.533 1.00148.07 C
ATOM 12 O2' C A 19 25.699 -41.658 -2.959 1.00147.94 O
ATOM 13 C1' C A 19 24.601 -43.808 -3.133 1.00147.39 C
ATOM 14 N1 C A 19 23.286 -44.391 -3.466 1.00145.97 N
ATOM 15 C2 C A 19 22.969 -44.630 -4.808 1.00145.11 C
ATOM 16 O2 C A 19 23.750 -44.249 -5.689 1.00144.06 O
ATOM 17 N3 C A 19 21.810 -45.258 -5.108 1.00144.92 N
ATOM 18 C4 C A 19 20.965 -45.600 -4.134 1.00145.08 C
ATOM 19 N4 C A 19 19.842 -46.228 -4.475 1.00145.04 N
ATOM 20 C5 C A 19 21.238 -45.320 -2.767 1.00144.95 C
ATOM 21 C6 C A 19 22.399 -44.725 -2.479 1.00145.30 C
ATOM 22 P C A 20 24.348 -40.906 0.906 1.00148.10 P
ATOM 23 OP1 C A 20 24.939 -41.282 2.215 1.00147.65 O
ATOM 24 OP2 C A 20 22.898 -41.118 0.670 1.00148.36 O
ATOM 25 O5' C A 20 24.626 -39.361 0.671 1.00147.56 O
TER
ATOM 1 O3' U B 17 16.977 -47.040 -0.456 1.00155.60 O
ATOM 2 P U B 18 18.521 -46.731 -0.842 1.00157.21 P
ATOM 3 OP1 U B 18 18.962 -45.554 -0.043 1.00156.93 O
ATOM 4 OP2 U B 18 18.581 -46.664 -2.329 1.00157.00 O
ATOM 5 O5' U B 18 19.369 -48.008 -0.363 1.00156.51 O
ATOM 6 C5' U B 18 19.585 -48.295 1.029 1.00154.74 C
ATOM 7 C4' U B 18 21.068 -48.517 1.332 1.00153.42 C
ATOM 8 O4' U B 18 21.589 -49.755 0.794 1.00153.14 O
ATOM 9 C3' U B 18 22.067 -47.479 0.827 1.00152.86 C
ATOM 10 O3' U B 18 22.185 -46.402 1.754 1.00151.11 O
ATOM 11 C2' U B 18 23.404 -48.245 0.739 1.00153.07 C
ATOM 12 O2' U B 18 24.320 -47.821 1.733 1.00153.27 O
ATOM 13 C1' U B 18 22.995 -49.713 0.959 1.00152.94 C
ATOM 14 N1 U B 18 23.655 -50.731 0.106 1.00152.41 N
ATOM 15 C2 U B 18 24.913 -51.203 0.513 1.00151.88 C
ATOM 16 O2 U B 18 25.488 -50.802 1.507 1.00152.71 O
ATOM 17 N3 U B 18 25.470 -52.164 -0.293 1.00150.27 N
ATOM 18 C4 U B 18 24.936 -52.698 -1.434 1.00149.67 C
ATOM 19 O4 U B 18 25.544 -53.592 -2.012 1.00148.46 O
ATOM 20 C5 U B 18 23.658 -52.165 -1.806 1.00150.16 C
ATOM 21 C6 U B 18 23.073 -51.222 -1.044 1.00151.47 C
ATOM 22 P C B 19 22.786 -44.994 1.269 1.00149.83 P
ATOM 23 OP1 C B 19 23.446 -44.365 2.439 1.00149.55 O
ATOM 24 OP2 C B 19 21.688 -44.273 0.562 1.00149.87 O
ATOM 25 O5' C B 19 23.891 -45.379 0.183 1.00149.28 O
TER
ATOM 2 P C A 19 22.786 -44.994 1.269 1.00149.83 P
ATOM 3 OP1 C A 19 23.446 -44.365 2.439 1.00149.55 O
ATOM 4 OP2 C A 19 21.688 -44.273 0.562 1.00149.87 O
ATOM 5 O5' C A 19 23.891 -45.379 0.183 1.00149.28 O
ATOM 6 C5' C A 19 25.216 -44.837 0.238 1.00148.73 C
ATOM 7 C4' C A 19 25.462 -43.923 -0.948 1.00148.48 C
ATOM 8 O4' C A 19 25.215 -44.659 -2.176 1.00148.06 O
ATOM 9 C3' C A 19 24.566 -42.694 -1.033 1.00148.60 C
ATOM 10 O3' C A 19 25.162 -41.618 -0.296 1.00148.43 O
ATOM 11 C2' C A 19 24.571 -42.397 -2.533 1.00148.07 C
ATOM 12 O2' C A 19 25.699 -41.658 -2.959 1.00147.94 O
ATOM 13 C1' C A 19 24.601 -43.808 -3.133 1.00147.39 C
ATOM 14 N1 C A 19 23.286 -44.391 -3.466 1.00145.97 N
ATOM 15 C2 C A 19 22.969 -44.630 -4.808 1.00145.11 C
ATOM 16 O2 C A 19 23.750 -44.249 -5.689 1.00144.06 O
ATOM 17 N3 C A 19 21.810 -45.258 -5.108 1.00144.92 N
ATOM 18 C4 C A 19 20.965 -45.600 -4.134 1.00145.08 C
ATOM 19 N4 C A 19 19.842 -46.228 -4.475 1.00145.04 N
ATOM 20 C5 C A 19 21.238 -45.320 -2.767 1.00144.95 C
ATOM 21 C6 C A 19 22.399 -44.725 -2.479 1.00145.30 C
ATOM 22 P C A 20 24.348 -40.906 0.906 1.00148.10 P
ATOM 23 OP1 C A 20 24.939 -41.282 2.215 1.00147.65 O
ATOM 24 OP2 C A 20 22.898 -41.118 0.670 1.00148.36 O
ATOM 25 O5' C A 20 24.626 -39.361 0.671 1.00147.56 O
TER
ATOM 1 O3' U B 17 16.977 -47.040 -0.456 1.00155.60 O
ATOM 2 P U B 18 18.521 -46.731 -0.842 1.00157.21 P
ATOM 3 OP1 U B 18 18.962 -45.554 -0.043 1.00156.93 O
ATOM 4 OP2 U B 18 18.581 -46.664 -2.329 1.00157.00 O
ATOM 5 O5' U B 18 19.369 -48.008 -0.363 1.00156.51 O
ATOM 6 C5' U B 18 19.585 -48.295 1.029 1.00154.74 C
ATOM 7 C4' U B 18 21.068 -48.517 1.332 1.00153.42 C
ATOM 8 O4' U B 18 21.589 -49.755 0.794 1.00153.14 O
ATOM 9 C3' U B 18 22.067 -47.479 0.827 1.00152.86 C
ATOM 10 O3' U B 18 22.185 -46.402 1.754 1.00151.11 O
ATOM 11 C2' U B 18 23.404 -48.245 0.739 1.00153.07 C
ATOM 12 O2' U B 18 24.320 -47.821 1.733 1.00153.27 O
ATOM 13 C1' U B 18 22.995 -49.713 0.959 1.00152.94 C
ATOM 14 N1 U B 18 23.655 -50.731 0.106 1.00152.41 N
ATOM 15 C2 U B 18 24.913 -51.203 0.513 1.00151.88 C
ATOM 16 O2 U B 18 25.488 -50.802 1.507 1.00152.71 O
ATOM 17 N3 U B 18 25.470 -52.164 -0.293 1.00150.27 N
ATOM 18 C4 U B 18 24.936 -52.698 -1.434 1.00149.67 C
ATOM 19 O4 U B 18 25.544 -53.592 -2.012 1.00148.46 O
ATOM 20 C5 U B 18 23.658 -52.165 -1.806 1.00150.16 C
ATOM 21 C6 U B 18 23.073 -51.222 -1.044 1.00151.47 C
ATOM 22 P C B 19 22.786 -44.994 1.269 1.00149.83 P
ATOM 23 OP1 C B 19 23.446 -44.365 2.439 1.00149.55 O
ATOM 24 OP2 C B 19 21.688 -44.273 0.562 1.00149.87 O
ATOM 25 O5' C B 19 23.891 -45.379 0.183 1.00149.28 O
TER
Atoms:
C2: (22.969,-44.630,-4.808)
OP1: (23.446,-44.365,2.439)
OP2: (21.688,-44.273,0.562)
C4: (20.965,-45.600,-4.134)
O5': (23.891,-45.379,0.183)
C3': (24.566,-42.694,-1.033)
C1': (24.601,-43.808,-3.133)
O4': (25.215,-44.659,-2.176)
C5': (25.216,-44.837,0.238)
P: (22.786,-44.994,1.269)
O2: (23.750,-44.249,-5.689)
C4': (25.462,-43.923,-0.948)
C2': (24.571,-42.397,-2.533)
O2': (25.699,-41.658,-2.959)
N1: (23.286,-44.391,-3.466)
N3: (21.810,-45.258,-5.108)
N4: (19.842,-46.228,-4.475)
C6: (22.399,-44.725,-2.479)
C5: (21.238,-45.320,-2.767)
O3': (25.162,-41.618,-0.296)
OP1: (23.446,-44.365,2.439)
OP2: (21.688,-44.273,0.562)
C4: (20.965,-45.600,-4.134)
O5': (23.891,-45.379,0.183)
C3': (24.566,-42.694,-1.033)
C1': (24.601,-43.808,-3.133)
O4': (25.215,-44.659,-2.176)
C5': (25.216,-44.837,0.238)
P: (22.786,-44.994,1.269)
O2: (23.750,-44.249,-5.689)
C4': (25.462,-43.923,-0.948)
C2': (24.571,-42.397,-2.533)
O2': (25.699,-41.658,-2.959)
N1: (23.286,-44.391,-3.466)
N3: (21.810,-45.258,-5.108)
N4: (19.842,-46.228,-4.475)
C6: (22.399,-44.725,-2.479)
C5: (21.238,-45.320,-2.767)
O3': (25.162,-41.618,-0.296)
C4: (24.936,-52.698,-1.434)
N3: (25.470,-52.164,-0.293)
OP1: (18.962,-45.554,-0.043)
OP2: (18.581,-46.664,-2.329)
C2: (24.913,-51.203,0.513)
C1': (22.995,-49.713,0.959)
C3': (22.067,-47.479,0.827)
O5': (19.369,-48.008,-0.363)
O4': (21.589,-49.755,0.794)
C5': (19.585,-48.295,1.029)
P: (18.521,-46.731,-0.842)
C4': (21.068,-48.517,1.332)
C2': (23.404,-48.245,0.739)
O2': (24.320,-47.821,1.733)
N1: (23.655,-50.731,0.106)
O4: (25.544,-53.592,-2.012)
O2: (25.488,-50.802,1.507)
C6: (23.073,-51.222,-1.044)
C5: (23.658,-52.165,-1.806)
O3': (22.185,-46.402,1.754)
N3: (25.470,-52.164,-0.293)
OP1: (18.962,-45.554,-0.043)
OP2: (18.581,-46.664,-2.329)
C2: (24.913,-51.203,0.513)
C1': (22.995,-49.713,0.959)
C3': (22.067,-47.479,0.827)
O5': (19.369,-48.008,-0.363)
O4': (21.589,-49.755,0.794)
C5': (19.585,-48.295,1.029)
P: (18.521,-46.731,-0.842)
C4': (21.068,-48.517,1.332)
C2': (23.404,-48.245,0.739)
O2': (24.320,-47.821,1.733)
N1: (23.655,-50.731,0.106)
O4: (25.544,-53.592,-2.012)
O2: (25.488,-50.802,1.507)
C6: (23.073,-51.222,-1.044)
C5: (23.658,-52.165,-1.806)
O3': (22.185,-46.402,1.754)
Image (generated by PyMOL):