Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 45.342 106.013 117.722 1.00 53.63 O
ATOM 2 P C A1088 45.157 106.263 119.299 1.00 56.00 P
ATOM 3 OP1 C A1088 44.604 107.636 119.467 1.00 54.05 O
ATOM 4 OP2 C A1088 46.432 105.895 119.969 1.00 55.51 O
ATOM 5 O5' C A1088 44.047 105.203 119.731 1.00 56.96 O
ATOM 6 C5' C A1088 42.863 105.605 120.447 1.00 57.90 C
ATOM 7 C4' C A1088 42.247 104.416 121.148 1.00 60.19 C
ATOM 8 O4' C A1088 41.911 103.401 120.167 1.00 59.58 O
ATOM 9 C3' C A1088 43.141 103.682 122.136 1.00 60.87 C
ATOM 10 O3' C A1088 43.119 104.302 123.408 1.00 63.24 O
ATOM 11 C2' C A1088 42.485 102.311 122.203 1.00 60.91 C
ATOM 12 O2' C A1088 41.345 102.296 123.042 1.00 60.14 O
ATOM 13 C1' C A1088 42.058 102.116 120.746 1.00 59.13 C
ATOM 14 N1 C A1088 43.029 101.344 119.951 1.00 58.68 N
ATOM 15 C2 C A1088 43.044 99.957 120.088 1.00 59.71 C
ATOM 16 O2 C A1088 42.262 99.423 120.890 1.00 61.64 O
ATOM 17 N3 C A1088 43.911 99.228 119.353 1.00 60.67 N
ATOM 18 C4 C A1088 44.756 99.833 118.519 1.00 59.71 C
ATOM 19 N4 C A1088 45.608 99.062 117.829 1.00 58.23 N
ATOM 20 C5 C A1088 44.770 101.249 118.359 1.00 58.92 C
ATOM 21 C6 C A1088 43.897 101.960 119.090 1.00 58.81 C
ATOM 22 P U A1089 44.424 105.053 123.948 1.00 65.95 P
ATOM 23 OP1 U A1089 44.126 105.499 125.332 1.00 65.57 O
ATOM 24 OP2 U A1089 44.855 106.047 122.926 1.00 66.85 O
ATOM 25 O5' U A1089 45.524 103.914 124.033 1.00 67.10 O
TER
ATOM 1 O3' C B1086 49.684 101.601 115.353 1.00 50.13 O
ATOM 2 P U B1087 48.466 101.274 116.345 1.00 49.92 P
ATOM 3 OP1 U B1087 49.044 101.147 117.705 1.00 49.46 O
ATOM 4 OP2 U B1087 47.693 100.147 115.763 1.00 48.58 O
ATOM 5 O5' U B1087 47.570 102.590 116.307 1.00 49.30 O
ATOM 6 C5' U B1087 48.140 103.864 116.644 1.00 50.08 C
ATOM 7 C4' U B1087 47.114 104.960 116.508 1.00 50.28 C
ATOM 8 O4' U B1087 46.763 105.125 115.105 1.00 50.57 O
ATOM 9 C3' U B1087 45.800 104.750 117.254 1.00 51.38 C
ATOM 10 O3' U B1087 45.342 106.013 117.722 1.00 53.63 O
ATOM 11 C2' U B1087 44.879 104.241 116.148 1.00 50.48 C
ATOM 12 O2' U B1087 43.510 104.488 116.374 1.00 50.15 O
ATOM 13 C1' U B1087 45.359 105.080 114.973 1.00 49.88 C
ATOM 14 N1 U B1087 45.005 104.582 113.635 1.00 49.66 N
ATOM 15 C2 U B1087 44.234 105.413 112.841 1.00 49.35 C
ATOM 16 O2 U B1087 43.838 106.502 113.211 1.00 49.65 O
ATOM 17 N3 U B1087 43.934 104.921 111.598 1.00 49.58 N
ATOM 18 C4 U B1087 44.303 103.703 111.075 1.00 50.39 C
ATOM 19 O4 U B1087 43.956 103.413 109.926 1.00 51.20 O
ATOM 20 C5 U B1087 45.093 102.886 111.957 1.00 49.36 C
ATOM 21 C6 U B1087 45.412 103.345 113.175 1.00 49.85 C
ATOM 22 P C B1088 45.157 106.263 119.299 1.00 56.00 P
ATOM 23 OP1 C B1088 44.604 107.636 119.467 1.00 54.05 O
ATOM 24 OP2 C B1088 46.432 105.895 119.969 1.00 55.51 O
ATOM 25 O5' C B1088 44.047 105.203 119.731 1.00 56.96 O
TER
ATOM 2 P C A1088 45.157 106.263 119.299 1.00 56.00 P
ATOM 3 OP1 C A1088 44.604 107.636 119.467 1.00 54.05 O
ATOM 4 OP2 C A1088 46.432 105.895 119.969 1.00 55.51 O
ATOM 5 O5' C A1088 44.047 105.203 119.731 1.00 56.96 O
ATOM 6 C5' C A1088 42.863 105.605 120.447 1.00 57.90 C
ATOM 7 C4' C A1088 42.247 104.416 121.148 1.00 60.19 C
ATOM 8 O4' C A1088 41.911 103.401 120.167 1.00 59.58 O
ATOM 9 C3' C A1088 43.141 103.682 122.136 1.00 60.87 C
ATOM 10 O3' C A1088 43.119 104.302 123.408 1.00 63.24 O
ATOM 11 C2' C A1088 42.485 102.311 122.203 1.00 60.91 C
ATOM 12 O2' C A1088 41.345 102.296 123.042 1.00 60.14 O
ATOM 13 C1' C A1088 42.058 102.116 120.746 1.00 59.13 C
ATOM 14 N1 C A1088 43.029 101.344 119.951 1.00 58.68 N
ATOM 15 C2 C A1088 43.044 99.957 120.088 1.00 59.71 C
ATOM 16 O2 C A1088 42.262 99.423 120.890 1.00 61.64 O
ATOM 17 N3 C A1088 43.911 99.228 119.353 1.00 60.67 N
ATOM 18 C4 C A1088 44.756 99.833 118.519 1.00 59.71 C
ATOM 19 N4 C A1088 45.608 99.062 117.829 1.00 58.23 N
ATOM 20 C5 C A1088 44.770 101.249 118.359 1.00 58.92 C
ATOM 21 C6 C A1088 43.897 101.960 119.090 1.00 58.81 C
ATOM 22 P U A1089 44.424 105.053 123.948 1.00 65.95 P
ATOM 23 OP1 U A1089 44.126 105.499 125.332 1.00 65.57 O
ATOM 24 OP2 U A1089 44.855 106.047 122.926 1.00 66.85 O
ATOM 25 O5' U A1089 45.524 103.914 124.033 1.00 67.10 O
TER
ATOM 1 O3' C B1086 49.684 101.601 115.353 1.00 50.13 O
ATOM 2 P U B1087 48.466 101.274 116.345 1.00 49.92 P
ATOM 3 OP1 U B1087 49.044 101.147 117.705 1.00 49.46 O
ATOM 4 OP2 U B1087 47.693 100.147 115.763 1.00 48.58 O
ATOM 5 O5' U B1087 47.570 102.590 116.307 1.00 49.30 O
ATOM 6 C5' U B1087 48.140 103.864 116.644 1.00 50.08 C
ATOM 7 C4' U B1087 47.114 104.960 116.508 1.00 50.28 C
ATOM 8 O4' U B1087 46.763 105.125 115.105 1.00 50.57 O
ATOM 9 C3' U B1087 45.800 104.750 117.254 1.00 51.38 C
ATOM 10 O3' U B1087 45.342 106.013 117.722 1.00 53.63 O
ATOM 11 C2' U B1087 44.879 104.241 116.148 1.00 50.48 C
ATOM 12 O2' U B1087 43.510 104.488 116.374 1.00 50.15 O
ATOM 13 C1' U B1087 45.359 105.080 114.973 1.00 49.88 C
ATOM 14 N1 U B1087 45.005 104.582 113.635 1.00 49.66 N
ATOM 15 C2 U B1087 44.234 105.413 112.841 1.00 49.35 C
ATOM 16 O2 U B1087 43.838 106.502 113.211 1.00 49.65 O
ATOM 17 N3 U B1087 43.934 104.921 111.598 1.00 49.58 N
ATOM 18 C4 U B1087 44.303 103.703 111.075 1.00 50.39 C
ATOM 19 O4 U B1087 43.956 103.413 109.926 1.00 51.20 O
ATOM 20 C5 U B1087 45.093 102.886 111.957 1.00 49.36 C
ATOM 21 C6 U B1087 45.412 103.345 113.175 1.00 49.85 C
ATOM 22 P C B1088 45.157 106.263 119.299 1.00 56.00 P
ATOM 23 OP1 C B1088 44.604 107.636 119.467 1.00 54.05 O
ATOM 24 OP2 C B1088 46.432 105.895 119.969 1.00 55.51 O
ATOM 25 O5' C B1088 44.047 105.203 119.731 1.00 56.96 O
TER
Atoms:
C2: (43.044,99.957,120.088)
OP1: (44.604,107.636,119.467)
OP2: (46.432,105.895,119.969)
C4: (44.756,99.833,118.519)
O5': (44.047,105.203,119.731)
C3': (43.141,103.682,122.136)
C1': (42.058,102.116,120.746)
O4': (41.911,103.401,120.167)
C5': (42.863,105.605,120.447)
P: (45.157,106.263,119.299)
O2: (42.262,99.423,120.890)
C4': (42.247,104.416,121.148)
C2': (42.485,102.311,122.203)
O2': (41.345,102.296,123.042)
N1: (43.029,101.344,119.951)
N3: (43.911,99.228,119.353)
N4: (45.608,99.062,117.829)
C6: (43.897,101.960,119.090)
C5: (44.770,101.249,118.359)
O3': (43.119,104.302,123.408)
OP1: (44.604,107.636,119.467)
OP2: (46.432,105.895,119.969)
C4: (44.756,99.833,118.519)
O5': (44.047,105.203,119.731)
C3': (43.141,103.682,122.136)
C1': (42.058,102.116,120.746)
O4': (41.911,103.401,120.167)
C5': (42.863,105.605,120.447)
P: (45.157,106.263,119.299)
O2: (42.262,99.423,120.890)
C4': (42.247,104.416,121.148)
C2': (42.485,102.311,122.203)
O2': (41.345,102.296,123.042)
N1: (43.029,101.344,119.951)
N3: (43.911,99.228,119.353)
N4: (45.608,99.062,117.829)
C6: (43.897,101.960,119.090)
C5: (44.770,101.249,118.359)
O3': (43.119,104.302,123.408)
C4: (44.303,103.703,111.075)
N3: (43.934,104.921,111.598)
OP1: (49.044,101.147,117.705)
OP2: (47.693,100.147,115.763)
C2: (44.234,105.413,112.841)
C1': (45.359,105.080,114.973)
C3': (45.800,104.750,117.254)
O5': (47.570,102.590,116.307)
O4': (46.763,105.125,115.105)
C5': (48.140,103.864,116.644)
P: (48.466,101.274,116.345)
C4': (47.114,104.960,116.508)
C2': (44.879,104.241,116.148)
O2': (43.510,104.488,116.374)
N1: (45.005,104.582,113.635)
O4: (43.956,103.413,109.926)
O2: (43.838,106.502,113.211)
C6: (45.412,103.345,113.175)
C5: (45.093,102.886,111.957)
O3': (45.342,106.013,117.722)
N3: (43.934,104.921,111.598)
OP1: (49.044,101.147,117.705)
OP2: (47.693,100.147,115.763)
C2: (44.234,105.413,112.841)
C1': (45.359,105.080,114.973)
C3': (45.800,104.750,117.254)
O5': (47.570,102.590,116.307)
O4': (46.763,105.125,115.105)
C5': (48.140,103.864,116.644)
P: (48.466,101.274,116.345)
C4': (47.114,104.960,116.508)
C2': (44.879,104.241,116.148)
O2': (43.510,104.488,116.374)
N1: (45.005,104.582,113.635)
O4: (43.956,103.413,109.926)
O2: (43.838,106.502,113.211)
C6: (45.412,103.345,113.175)
C5: (45.093,102.886,111.957)
O3': (45.342,106.013,117.722)
Image (generated by PyMOL):