Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DLC:Y58:Y57
Extra
PDB:
ATOM 1 O3' U A 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 2 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 3 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 4 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 5 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
ATOM 6 C5' C A 58 12.824 -10.507 131.627 1.00 32.76 C
ATOM 7 C4' C A 58 14.061 -11.059 130.934 1.00 32.88 C
ATOM 8 O4' C A 58 14.071 -10.666 129.536 1.00 32.97 O
ATOM 9 C3' C A 58 15.402 -10.570 131.465 1.00 32.88 C
ATOM 10 O3' C A 58 15.779 -11.304 132.623 1.00 32.66 O
ATOM 11 C2' C A 58 16.312 -10.838 130.267 1.00 33.09 C
ATOM 12 O2' C A 58 16.713 -12.190 130.139 1.00 33.20 O
ATOM 13 C1' C A 58 15.404 -10.438 129.104 1.00 33.15 C
ATOM 14 N1 C A 58 15.581 -8.999 128.664 1.00 33.59 N
ATOM 15 C2 C A 58 16.753 -8.594 127.988 1.00 33.59 C
ATOM 16 O2 C A 58 17.650 -9.415 127.745 1.00 33.80 O
ATOM 17 N3 C A 58 16.878 -7.293 127.609 1.00 33.40 N
ATOM 18 C4 C A 58 15.905 -6.414 127.873 1.00 33.43 C
ATOM 19 N4 C A 58 16.076 -5.149 127.479 1.00 33.28 N
ATOM 20 C5 C A 58 14.711 -6.799 128.555 1.00 33.48 C
ATOM 21 C6 C A 58 14.595 -8.081 128.925 1.00 33.38 C
ATOM 22 P G A 59 16.763 -10.668 133.713 1.00 32.33 P
ATOM 23 OP1 G A 59 16.816 -11.607 134.858 1.00 32.38 O
ATOM 24 OP2 G A 59 16.384 -9.255 133.939 1.00 31.77 O
ATOM 25 O5' G A 59 18.176 -10.663 132.964 1.00 32.57 O
TER
ATOM 1 O3' C B 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 2 P U B 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U B 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U B 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U B 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U B 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U B 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U B 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U B 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U B 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U B 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U B 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U B 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U B 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U B 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U B 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U B 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U B 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U B 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U B 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U B 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C B 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C B 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C B 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C B 58 12.990 -9.146 132.038 1.00 32.48 O
TER
ATOM 2 P C A 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 3 OP1 C A 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 4 OP2 C A 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 5 O5' C A 58 12.990 -9.146 132.038 1.00 32.48 O
ATOM 6 C5' C A 58 12.824 -10.507 131.627 1.00 32.76 C
ATOM 7 C4' C A 58 14.061 -11.059 130.934 1.00 32.88 C
ATOM 8 O4' C A 58 14.071 -10.666 129.536 1.00 32.97 O
ATOM 9 C3' C A 58 15.402 -10.570 131.465 1.00 32.88 C
ATOM 10 O3' C A 58 15.779 -11.304 132.623 1.00 32.66 O
ATOM 11 C2' C A 58 16.312 -10.838 130.267 1.00 33.09 C
ATOM 12 O2' C A 58 16.713 -12.190 130.139 1.00 33.20 O
ATOM 13 C1' C A 58 15.404 -10.438 129.104 1.00 33.15 C
ATOM 14 N1 C A 58 15.581 -8.999 128.664 1.00 33.59 N
ATOM 15 C2 C A 58 16.753 -8.594 127.988 1.00 33.59 C
ATOM 16 O2 C A 58 17.650 -9.415 127.745 1.00 33.80 O
ATOM 17 N3 C A 58 16.878 -7.293 127.609 1.00 33.40 N
ATOM 18 C4 C A 58 15.905 -6.414 127.873 1.00 33.43 C
ATOM 19 N4 C A 58 16.076 -5.149 127.479 1.00 33.28 N
ATOM 20 C5 C A 58 14.711 -6.799 128.555 1.00 33.48 C
ATOM 21 C6 C A 58 14.595 -8.081 128.925 1.00 33.38 C
ATOM 22 P G A 59 16.763 -10.668 133.713 1.00 32.33 P
ATOM 23 OP1 G A 59 16.816 -11.607 134.858 1.00 32.38 O
ATOM 24 OP2 G A 59 16.384 -9.255 133.939 1.00 31.77 O
ATOM 25 O5' G A 59 18.176 -10.663 132.964 1.00 32.57 O
TER
ATOM 1 O3' C B 56 12.361 -1.633 129.569 1.00 31.88 O
ATOM 2 P U B 57 13.191 -2.966 129.269 1.00 32.10 P
ATOM 3 OP1 U B 57 14.406 -2.939 130.118 1.00 31.99 O
ATOM 4 OP2 U B 57 13.347 -3.123 127.811 1.00 32.45 O
ATOM 5 O5' U B 57 12.215 -4.151 129.720 1.00 32.28 O
ATOM 6 C5' U B 57 11.973 -4.462 131.085 1.00 32.21 C
ATOM 7 C4' U B 57 10.875 -5.509 131.168 1.00 32.50 C
ATOM 8 O4' U B 57 9.780 -5.167 130.279 1.00 32.64 O
ATOM 9 C3' U B 57 11.324 -6.914 130.778 1.00 32.62 C
ATOM 10 O3' U B 57 10.850 -7.843 131.740 1.00 32.31 O
ATOM 11 C2' U B 57 10.712 -7.151 129.400 1.00 32.73 C
ATOM 12 O2' U B 57 10.333 -8.496 129.184 1.00 33.28 O
ATOM 13 C1' U B 57 9.472 -6.266 129.442 1.00 32.87 C
ATOM 14 N1 U B 57 9.047 -5.782 128.087 1.00 32.73 N
ATOM 15 C2 U B 57 7.852 -6.234 127.545 1.00 32.77 C
ATOM 16 O2 U B 57 7.101 -7.013 128.109 1.00 32.57 O
ATOM 17 N3 U B 57 7.559 -5.729 126.297 1.00 32.87 N
ATOM 18 C4 U B 57 8.325 -4.843 125.553 1.00 32.75 C
ATOM 19 O4 U B 57 7.932 -4.475 124.450 1.00 33.09 O
ATOM 20 C5 U B 57 9.552 -4.419 126.180 1.00 32.63 C
ATOM 21 C6 U B 57 9.860 -4.895 127.395 1.00 32.74 C
ATOM 22 P C B 58 11.844 -8.389 132.864 1.00 32.09 P
ATOM 23 OP1 C B 58 11.076 -9.378 133.658 1.00 32.29 O
ATOM 24 OP2 C B 58 12.481 -7.224 133.526 1.00 32.02 O
ATOM 25 O5' C B 58 12.990 -9.146 132.038 1.00 32.48 O
TER
Atoms:
C2: (16.753,-8.594,127.988)
OP1: (11.076,-9.378,133.658)
OP2: (12.481,-7.224,133.526)
C4: (15.905,-6.414,127.873)
O5': (12.990,-9.146,132.038)
C3': (15.402,-10.570,131.465)
C1': (15.404,-10.438,129.104)
O4': (14.071,-10.666,129.536)
C5': (12.824,-10.507,131.627)
P: (11.844,-8.389,132.864)
O2: (17.650,-9.415,127.745)
C4': (14.061,-11.059,130.934)
C2': (16.312,-10.838,130.267)
O2': (16.713,-12.190,130.139)
N1: (15.581,-8.999,128.664)
N3: (16.878,-7.293,127.609)
N4: (16.076,-5.149,127.479)
C6: (14.595,-8.081,128.925)
C5: (14.711,-6.799,128.555)
O3': (15.779,-11.304,132.623)
OP1: (11.076,-9.378,133.658)
OP2: (12.481,-7.224,133.526)
C4: (15.905,-6.414,127.873)
O5': (12.990,-9.146,132.038)
C3': (15.402,-10.570,131.465)
C1': (15.404,-10.438,129.104)
O4': (14.071,-10.666,129.536)
C5': (12.824,-10.507,131.627)
P: (11.844,-8.389,132.864)
O2: (17.650,-9.415,127.745)
C4': (14.061,-11.059,130.934)
C2': (16.312,-10.838,130.267)
O2': (16.713,-12.190,130.139)
N1: (15.581,-8.999,128.664)
N3: (16.878,-7.293,127.609)
N4: (16.076,-5.149,127.479)
C6: (14.595,-8.081,128.925)
C5: (14.711,-6.799,128.555)
O3': (15.779,-11.304,132.623)
C4: (8.325,-4.843,125.553)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
N3: (7.559,-5.729,126.297)
OP1: (14.406,-2.939,130.118)
OP2: (13.347,-3.123,127.811)
C2: (7.852,-6.234,127.545)
C1': (9.472,-6.266,129.442)
C3': (11.324,-6.914,130.778)
O5': (12.215,-4.151,129.720)
O4': (9.780,-5.167,130.279)
C5': (11.973,-4.462,131.085)
P: (13.191,-2.966,129.269)
C4': (10.875,-5.509,131.168)
C2': (10.712,-7.151,129.400)
O2': (10.333,-8.496,129.184)
N1: (9.047,-5.782,128.087)
O4: (7.932,-4.475,124.450)
O2: (7.101,-7.013,128.109)
C6: (9.860,-4.895,127.395)
C5: (9.552,-4.419,126.180)
O3': (10.850,-7.843,131.740)
Image (generated by PyMOL):