Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B61:B60
Extra
PDB:
ATOM 1 O3' U A 60 -16.703 34.764 85.238 1.00 34.90 O
ATOM 2 P C A 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 3 OP1 C A 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 4 OP2 C A 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 5 O5' C A 61 -17.450 35.789 82.993 1.00 37.55 O
ATOM 6 C5' C A 61 -18.780 35.296 82.697 1.00 41.46 C
ATOM 7 C4' C A 61 -19.643 36.400 82.129 1.00 30.84 C
ATOM 8 O4' C A 61 -20.229 37.135 83.221 1.00 34.17 O
ATOM 9 C3' C A 61 -18.900 37.471 81.325 1.00 35.54 C
ATOM 10 O3' C A 61 -18.550 36.977 80.018 1.00 50.56 O
ATOM 11 C2' C A 61 -19.888 38.638 81.388 1.00 42.12 C
ATOM 12 O2' C A 61 -21.051 38.509 80.491 1.00 39.04 O
ATOM 13 C1' C A 61 -20.355 38.517 82.857 1.00 34.64 C
ATOM 14 N1 C A 61 -19.514 39.251 83.793 1.00 28.19 N
ATOM 15 C2 C A 61 -19.610 40.573 83.798 1.00 32.14 C
ATOM 16 O2 C A 61 -20.337 41.110 82.936 1.00 35.84 O
ATOM 17 N3 C A 61 -18.922 41.311 84.706 1.00 35.75 N
ATOM 18 C4 C A 61 -18.149 40.737 85.586 1.00 30.63 C
ATOM 19 N4 C A 61 -17.511 41.564 86.451 1.00 31.32 N
ATOM 20 C5 C A 61 -17.988 39.317 85.623 1.00 36.86 C
ATOM 21 C6 C A 61 -18.681 38.605 84.668 1.00 26.17 C
ATOM 22 P C A 62 -17.249 37.565 79.235 1.00 44.39 P
ATOM 23 OP1 C A 62 -17.134 36.591 78.113 1.00 51.87 O
ATOM 24 OP2 C A 62 -16.108 37.755 80.192 1.00 45.02 O
ATOM 25 O5' C A 62 -17.636 39.040 78.773 1.00 41.59 O
TER
ATOM 1 O3' A B 59 -13.465 39.168 88.981 1.00 29.92 O
ATOM 2 P U B 60 -14.689 39.519 87.957 1.00 33.44 P
ATOM 3 OP1 U B 60 -14.215 40.207 86.797 1.00 33.70 O
ATOM 4 OP2 U B 60 -15.818 40.142 88.678 1.00 33.85 O
ATOM 5 O5' U B 60 -15.216 38.038 87.634 1.00 32.93 O
ATOM 6 C5' U B 60 -14.449 37.054 86.893 1.00 33.31 C
ATOM 7 C4' U B 60 -15.211 35.771 86.877 1.00 29.22 C
ATOM 8 O4' U B 60 -15.550 35.393 88.214 1.00 36.72 O
ATOM 9 C3' U B 60 -16.532 35.938 86.087 1.00 34.96 C
ATOM 10 O3' U B 60 -16.703 34.764 85.238 1.00 34.90 O
ATOM 11 C2' U B 60 -17.625 35.879 87.151 1.00 37.88 C
ATOM 12 O2' U B 60 -18.907 35.421 86.725 1.00 36.32 O
ATOM 13 C1' U B 60 -16.942 35.091 88.284 1.00 35.22 C
ATOM 14 N1 U B 60 -17.426 35.438 89.620 1.00 34.61 N
ATOM 15 C2 U B 60 -18.096 34.488 90.367 1.00 35.73 C
ATOM 16 O2 U B 60 -18.383 33.343 89.939 1.00 42.00 O
ATOM 17 N3 U B 60 -18.449 34.917 91.625 1.00 33.66 N
ATOM 18 C4 U B 60 -18.256 36.165 92.171 1.00 35.32 C
ATOM 19 O4 U B 60 -18.700 36.398 93.260 1.00 36.90 O
ATOM 20 C5 U B 60 -17.605 37.100 91.335 1.00 34.85 C
ATOM 21 C6 U B 60 -17.211 36.719 90.113 1.00 31.50 C
ATOM 22 P C B 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 23 OP1 C B 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 24 OP2 C B 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 25 O5' C B 61 -17.450 35.789 82.993 1.00 37.55 O
TER
ATOM 2 P C A 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 3 OP1 C A 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 4 OP2 C A 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 5 O5' C A 61 -17.450 35.789 82.993 1.00 37.55 O
ATOM 6 C5' C A 61 -18.780 35.296 82.697 1.00 41.46 C
ATOM 7 C4' C A 61 -19.643 36.400 82.129 1.00 30.84 C
ATOM 8 O4' C A 61 -20.229 37.135 83.221 1.00 34.17 O
ATOM 9 C3' C A 61 -18.900 37.471 81.325 1.00 35.54 C
ATOM 10 O3' C A 61 -18.550 36.977 80.018 1.00 50.56 O
ATOM 11 C2' C A 61 -19.888 38.638 81.388 1.00 42.12 C
ATOM 12 O2' C A 61 -21.051 38.509 80.491 1.00 39.04 O
ATOM 13 C1' C A 61 -20.355 38.517 82.857 1.00 34.64 C
ATOM 14 N1 C A 61 -19.514 39.251 83.793 1.00 28.19 N
ATOM 15 C2 C A 61 -19.610 40.573 83.798 1.00 32.14 C
ATOM 16 O2 C A 61 -20.337 41.110 82.936 1.00 35.84 O
ATOM 17 N3 C A 61 -18.922 41.311 84.706 1.00 35.75 N
ATOM 18 C4 C A 61 -18.149 40.737 85.586 1.00 30.63 C
ATOM 19 N4 C A 61 -17.511 41.564 86.451 1.00 31.32 N
ATOM 20 C5 C A 61 -17.988 39.317 85.623 1.00 36.86 C
ATOM 21 C6 C A 61 -18.681 38.605 84.668 1.00 26.17 C
ATOM 22 P C A 62 -17.249 37.565 79.235 1.00 44.39 P
ATOM 23 OP1 C A 62 -17.134 36.591 78.113 1.00 51.87 O
ATOM 24 OP2 C A 62 -16.108 37.755 80.192 1.00 45.02 O
ATOM 25 O5' C A 62 -17.636 39.040 78.773 1.00 41.59 O
TER
ATOM 1 O3' A B 59 -13.465 39.168 88.981 1.00 29.92 O
ATOM 2 P U B 60 -14.689 39.519 87.957 1.00 33.44 P
ATOM 3 OP1 U B 60 -14.215 40.207 86.797 1.00 33.70 O
ATOM 4 OP2 U B 60 -15.818 40.142 88.678 1.00 33.85 O
ATOM 5 O5' U B 60 -15.216 38.038 87.634 1.00 32.93 O
ATOM 6 C5' U B 60 -14.449 37.054 86.893 1.00 33.31 C
ATOM 7 C4' U B 60 -15.211 35.771 86.877 1.00 29.22 C
ATOM 8 O4' U B 60 -15.550 35.393 88.214 1.00 36.72 O
ATOM 9 C3' U B 60 -16.532 35.938 86.087 1.00 34.96 C
ATOM 10 O3' U B 60 -16.703 34.764 85.238 1.00 34.90 O
ATOM 11 C2' U B 60 -17.625 35.879 87.151 1.00 37.88 C
ATOM 12 O2' U B 60 -18.907 35.421 86.725 1.00 36.32 O
ATOM 13 C1' U B 60 -16.942 35.091 88.284 1.00 35.22 C
ATOM 14 N1 U B 60 -17.426 35.438 89.620 1.00 34.61 N
ATOM 15 C2 U B 60 -18.096 34.488 90.367 1.00 35.73 C
ATOM 16 O2 U B 60 -18.383 33.343 89.939 1.00 42.00 O
ATOM 17 N3 U B 60 -18.449 34.917 91.625 1.00 33.66 N
ATOM 18 C4 U B 60 -18.256 36.165 92.171 1.00 35.32 C
ATOM 19 O4 U B 60 -18.700 36.398 93.260 1.00 36.90 O
ATOM 20 C5 U B 60 -17.605 37.100 91.335 1.00 34.85 C
ATOM 21 C6 U B 60 -17.211 36.719 90.113 1.00 31.50 C
ATOM 22 P C B 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 23 OP1 C B 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 24 OP2 C B 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 25 O5' C B 61 -17.450 35.789 82.993 1.00 37.55 O
TER
Atoms:
C2: (-19.610,40.573,83.798)
OP1: (-16.425,33.411,83.231)
OP2: (-15.075,35.599,83.421)
C4: (-18.149,40.737,85.586)
O5': (-17.450,35.789,82.993)
C3': (-18.900,37.471,81.325)
C1': (-20.355,38.517,82.857)
O4': (-20.229,37.135,83.221)
C5': (-18.780,35.296,82.697)
P: (-16.339,34.827,83.663)
O2: (-20.337,41.110,82.936)
C4': (-19.643,36.400,82.129)
C2': (-19.888,38.638,81.388)
O2': (-21.051,38.509,80.491)
N1: (-19.514,39.251,83.793)
N3: (-18.922,41.311,84.706)
N4: (-17.511,41.564,86.451)
C6: (-18.681,38.605,84.668)
C5: (-17.988,39.317,85.623)
O3': (-18.550,36.977,80.018)
OP1: (-16.425,33.411,83.231)
OP2: (-15.075,35.599,83.421)
C4: (-18.149,40.737,85.586)
O5': (-17.450,35.789,82.993)
C3': (-18.900,37.471,81.325)
C1': (-20.355,38.517,82.857)
O4': (-20.229,37.135,83.221)
C5': (-18.780,35.296,82.697)
P: (-16.339,34.827,83.663)
O2: (-20.337,41.110,82.936)
C4': (-19.643,36.400,82.129)
C2': (-19.888,38.638,81.388)
O2': (-21.051,38.509,80.491)
N1: (-19.514,39.251,83.793)
N3: (-18.922,41.311,84.706)
N4: (-17.511,41.564,86.451)
C6: (-18.681,38.605,84.668)
C5: (-17.988,39.317,85.623)
O3': (-18.550,36.977,80.018)
C4: (-18.256,36.165,92.171)
N3: (-18.449,34.917,91.625)
OP1: (-14.215,40.207,86.797)
OP2: (-15.818,40.142,88.678)
C2: (-18.096,34.488,90.367)
C1': (-16.942,35.091,88.284)
C3': (-16.532,35.938,86.087)
O5': (-15.216,38.038,87.634)
O4': (-15.550,35.393,88.214)
C5': (-14.449,37.054,86.893)
P: (-14.689,39.519,87.957)
C4': (-15.211,35.771,86.877)
C2': (-17.625,35.879,87.151)
O2': (-18.907,35.421,86.725)
N1: (-17.426,35.438,89.620)
O4: (-18.700,36.398,93.260)
O2: (-18.383,33.343,89.939)
C6: (-17.211,36.719,90.113)
C5: (-17.605,37.100,91.335)
O3': (-16.703,34.764,85.238)
N3: (-18.449,34.917,91.625)
OP1: (-14.215,40.207,86.797)
OP2: (-15.818,40.142,88.678)
C2: (-18.096,34.488,90.367)
C1': (-16.942,35.091,88.284)
C3': (-16.532,35.938,86.087)
O5': (-15.216,38.038,87.634)
O4': (-15.550,35.393,88.214)
C5': (-14.449,37.054,86.893)
P: (-14.689,39.519,87.957)
C4': (-15.211,35.771,86.877)
C2': (-17.625,35.879,87.151)
O2': (-18.907,35.421,86.725)
N1: (-17.426,35.438,89.620)
O4: (-18.700,36.398,93.260)
O2: (-18.383,33.343,89.939)
C6: (-17.211,36.719,90.113)
C5: (-17.605,37.100,91.335)
O3': (-16.703,34.764,85.238)
Image (generated by PyMOL):