Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01730:01729
Extra
PDB:
ATOM 1 O3' U A1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 2 P C A1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 3 OP1 C A1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 4 OP2 C A1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 5 O5' C A1730 123.234 147.143 98.246 1.00 57.77 O
ATOM 6 C5' C A1730 122.357 148.236 97.909 1.00 59.93 C
ATOM 7 C4' C A1730 122.541 149.379 98.880 1.00 61.02 C
ATOM 8 O4' C A1730 122.229 148.924 100.223 1.00 61.19 O
ATOM 9 C3' C A1730 123.950 149.944 98.962 1.00 62.75 C
ATOM 10 O3' C A1730 123.840 151.294 99.419 1.00 63.45 O
ATOM 11 C2' C A1730 124.559 149.094 100.071 1.00 63.39 C
ATOM 12 O2' C A1730 125.697 149.671 100.682 1.00 65.47 O
ATOM 13 C1' C A1730 123.379 149.036 101.037 1.00 61.94 C
ATOM 14 N1 C A1730 123.374 147.934 102.011 1.00 61.21 N
ATOM 15 C2 C A1730 123.485 148.250 103.367 1.00 59.96 C
ATOM 16 O2 C A1730 123.647 149.435 103.691 1.00 59.55 O
ATOM 17 N3 C A1730 123.415 147.261 104.288 1.00 59.30 N
ATOM 18 C4 C A1730 123.251 145.995 103.895 1.00 59.67 C
ATOM 19 N4 C A1730 123.152 145.055 104.840 1.00 58.31 N
ATOM 20 C5 C A1730 123.172 145.638 102.515 1.00 60.18 C
ATOM 21 C6 C A1730 123.240 146.630 101.614 1.00 61.16 C
ATOM 22 P G A1731 124.265 152.507 98.458 1.00 62.83 P
ATOM 23 OP1 G A1731 125.295 151.984 97.511 1.00 62.16 O
ATOM 24 OP2 G A1731 124.576 153.683 99.318 1.00 61.65 O
ATOM 25 O5' G A1731 122.934 152.831 97.645 1.00 61.39 O
TER
ATOM 1 O3' U B1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 2 P U B1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 3 OP1 U B1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 4 OP2 U B1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 5 O5' U B1729 121.668 142.746 101.056 1.00 52.06 O
ATOM 6 C5' U B1729 122.723 142.737 100.100 1.00 53.72 C
ATOM 7 C4' U B1729 122.213 143.165 98.752 1.00 56.52 C
ATOM 8 O4' U B1729 121.229 142.207 98.272 1.00 57.05 O
ATOM 9 C3' U B1729 121.553 144.537 98.686 1.00 57.88 C
ATOM 10 O3' U B1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 11 C2' U B1729 120.062 144.196 98.713 1.00 57.48 C
ATOM 12 O2' U B1729 119.256 145.146 98.050 1.00 57.06 O
ATOM 13 C1' U B1729 120.031 142.881 97.939 1.00 56.23 C
ATOM 14 N1 U B1729 118.901 142.004 98.285 1.00 55.21 N
ATOM 15 C2 U B1729 118.098 141.546 97.254 1.00 54.51 C
ATOM 16 O2 U B1729 118.254 141.880 96.085 1.00 53.69 O
ATOM 17 N3 U B1729 117.100 140.680 97.643 1.00 52.96 N
ATOM 18 C4 U B1729 116.825 140.242 98.924 1.00 52.54 C
ATOM 19 O4 U B1729 115.988 139.355 99.097 1.00 49.60 O
ATOM 20 C5 U B1729 117.672 140.794 99.931 1.00 54.01 C
ATOM 21 C6 U B1729 118.656 141.632 99.588 1.00 54.95 C
ATOM 22 P C B1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 23 OP1 C B1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 24 OP2 C B1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 25 O5' C B1730 123.234 147.143 98.246 1.00 57.77 O
TER
ATOM 2 P C A1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 3 OP1 C A1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 4 OP2 C A1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 5 O5' C A1730 123.234 147.143 98.246 1.00 57.77 O
ATOM 6 C5' C A1730 122.357 148.236 97.909 1.00 59.93 C
ATOM 7 C4' C A1730 122.541 149.379 98.880 1.00 61.02 C
ATOM 8 O4' C A1730 122.229 148.924 100.223 1.00 61.19 O
ATOM 9 C3' C A1730 123.950 149.944 98.962 1.00 62.75 C
ATOM 10 O3' C A1730 123.840 151.294 99.419 1.00 63.45 O
ATOM 11 C2' C A1730 124.559 149.094 100.071 1.00 63.39 C
ATOM 12 O2' C A1730 125.697 149.671 100.682 1.00 65.47 O
ATOM 13 C1' C A1730 123.379 149.036 101.037 1.00 61.94 C
ATOM 14 N1 C A1730 123.374 147.934 102.011 1.00 61.21 N
ATOM 15 C2 C A1730 123.485 148.250 103.367 1.00 59.96 C
ATOM 16 O2 C A1730 123.647 149.435 103.691 1.00 59.55 O
ATOM 17 N3 C A1730 123.415 147.261 104.288 1.00 59.30 N
ATOM 18 C4 C A1730 123.251 145.995 103.895 1.00 59.67 C
ATOM 19 N4 C A1730 123.152 145.055 104.840 1.00 58.31 N
ATOM 20 C5 C A1730 123.172 145.638 102.515 1.00 60.18 C
ATOM 21 C6 C A1730 123.240 146.630 101.614 1.00 61.16 C
ATOM 22 P G A1731 124.265 152.507 98.458 1.00 62.83 P
ATOM 23 OP1 G A1731 125.295 151.984 97.511 1.00 62.16 O
ATOM 24 OP2 G A1731 124.576 153.683 99.318 1.00 61.65 O
ATOM 25 O5' G A1731 122.934 152.831 97.645 1.00 61.39 O
TER
ATOM 1 O3' U B1728 120.295 141.849 102.973 1.00 52.98 O
ATOM 2 P U B1729 121.780 141.853 102.364 1.00 53.84 P
ATOM 3 OP1 U B1729 122.112 140.468 101.933 1.00 51.94 O
ATOM 4 OP2 U B1729 122.673 142.559 103.311 1.00 55.99 O
ATOM 5 O5' U B1729 121.668 142.746 101.056 1.00 52.06 O
ATOM 6 C5' U B1729 122.723 142.737 100.100 1.00 53.72 C
ATOM 7 C4' U B1729 122.213 143.165 98.752 1.00 56.52 C
ATOM 8 O4' U B1729 121.229 142.207 98.272 1.00 57.05 O
ATOM 9 C3' U B1729 121.553 144.537 98.686 1.00 57.88 C
ATOM 10 O3' U B1729 121.908 145.140 97.449 1.00 59.19 O
ATOM 11 C2' U B1729 120.062 144.196 98.713 1.00 57.48 C
ATOM 12 O2' U B1729 119.256 145.146 98.050 1.00 57.06 O
ATOM 13 C1' U B1729 120.031 142.881 97.939 1.00 56.23 C
ATOM 14 N1 U B1729 118.901 142.004 98.285 1.00 55.21 N
ATOM 15 C2 U B1729 118.098 141.546 97.254 1.00 54.51 C
ATOM 16 O2 U B1729 118.254 141.880 96.085 1.00 53.69 O
ATOM 17 N3 U B1729 117.100 140.680 97.643 1.00 52.96 N
ATOM 18 C4 U B1729 116.825 140.242 98.924 1.00 52.54 C
ATOM 19 O4 U B1729 115.988 139.355 99.097 1.00 49.60 O
ATOM 20 C5 U B1729 117.672 140.794 99.931 1.00 54.01 C
ATOM 21 C6 U B1729 118.656 141.632 99.588 1.00 54.95 C
ATOM 22 P C B1730 123.333 145.859 97.303 1.00 58.22 P
ATOM 23 OP1 C B1730 123.451 146.297 95.896 1.00 57.34 O
ATOM 24 OP2 C B1730 124.334 144.929 97.866 1.00 58.70 O
ATOM 25 O5' C B1730 123.234 147.143 98.246 1.00 57.77 O
TER
Atoms:
C2: (123.485,148.250,103.367)
OP1: (123.451,146.297,95.896)
OP2: (124.334,144.929,97.866)
C4: (123.251,145.995,103.895)
O5': (123.234,147.143,98.246)
C3': (123.950,149.944,98.962)
C1': (123.379,149.036,101.037)
O4': (122.229,148.924,100.223)
C5': (122.357,148.236,97.909)
P: (123.333,145.859,97.303)
O2: (123.647,149.435,103.691)
C4': (122.541,149.379,98.880)
C2': (124.559,149.094,100.071)
O2': (125.697,149.671,100.682)
N1: (123.374,147.934,102.011)
N3: (123.415,147.261,104.288)
N4: (123.152,145.055,104.840)
C6: (123.240,146.630,101.614)
C5: (123.172,145.638,102.515)
O3': (123.840,151.294,99.419)
OP1: (123.451,146.297,95.896)
OP2: (124.334,144.929,97.866)
C4: (123.251,145.995,103.895)
O5': (123.234,147.143,98.246)
C3': (123.950,149.944,98.962)
C1': (123.379,149.036,101.037)
O4': (122.229,148.924,100.223)
C5': (122.357,148.236,97.909)
P: (123.333,145.859,97.303)
O2: (123.647,149.435,103.691)
C4': (122.541,149.379,98.880)
C2': (124.559,149.094,100.071)
O2': (125.697,149.671,100.682)
N1: (123.374,147.934,102.011)
N3: (123.415,147.261,104.288)
N4: (123.152,145.055,104.840)
C6: (123.240,146.630,101.614)
C5: (123.172,145.638,102.515)
O3': (123.840,151.294,99.419)
C4: (116.825,140.242,98.924)
N3: (117.100,140.680,97.643)
OP1: (122.112,140.468,101.933)
OP2: (122.673,142.559,103.311)
C2: (118.098,141.546,97.254)
C1': (120.031,142.881,97.939)
C3': (121.553,144.537,98.686)
O5': (121.668,142.746,101.056)
O4': (121.229,142.207,98.272)
C5': (122.723,142.737,100.100)
P: (121.780,141.853,102.364)
C4': (122.213,143.165,98.752)
C2': (120.062,144.196,98.713)
O2': (119.256,145.146,98.050)
N1: (118.901,142.004,98.285)
O4: (115.988,139.355,99.097)
O2: (118.254,141.880,96.085)
C6: (118.656,141.632,99.588)
C5: (117.672,140.794,99.931)
O3': (121.908,145.140,97.449)
N3: (117.100,140.680,97.643)
OP1: (122.112,140.468,101.933)
OP2: (122.673,142.559,103.311)
C2: (118.098,141.546,97.254)
C1': (120.031,142.881,97.939)
C3': (121.553,144.537,98.686)
O5': (121.668,142.746,101.056)
O4': (121.229,142.207,98.272)
C5': (122.723,142.737,100.100)
P: (121.780,141.853,102.364)
C4': (122.213,143.165,98.752)
C2': (120.062,144.196,98.713)
O2': (119.256,145.146,98.050)
N1: (118.901,142.004,98.285)
O4: (115.988,139.355,99.097)
O2: (118.254,141.880,96.085)
C6: (118.656,141.632,99.588)
C5: (117.672,140.794,99.931)
O3': (121.908,145.140,97.449)
Image (generated by PyMOL):