Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 45.164 106.036 117.622 1.00 50.00 O
ATOM 2 P C A1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 3 OP1 C A1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 4 OP2 C A1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 5 O5' C A1088 44.349 105.344 119.891 1.00 53.50 O
ATOM 6 C5' C A1088 43.024 105.676 120.350 1.00 51.82 C
ATOM 7 C4' C A1088 42.348 104.450 120.918 1.00 53.13 C
ATOM 8 O4' C A1088 42.100 103.486 119.860 1.00 50.56 O
ATOM 9 C3' C A1088 43.159 103.667 121.936 1.00 54.88 C
ATOM 10 O3' C A1088 43.059 104.222 123.238 1.00 58.19 O
ATOM 11 C2' C A1088 42.496 102.300 121.884 1.00 54.20 C
ATOM 12 O2' C A1088 41.311 102.258 122.651 1.00 54.58 O
ATOM 13 C1' C A1088 42.180 102.172 120.388 1.00 51.75 C
ATOM 14 N1 C A1088 43.204 101.409 119.638 1.00 50.74 N
ATOM 15 C2 C A1088 43.372 100.047 119.925 1.00 49.83 C
ATOM 16 O2 C A1088 42.638 99.515 120.770 1.00 51.48 O
ATOM 17 N3 C A1088 44.323 99.345 119.278 1.00 49.89 N
ATOM 18 C4 C A1088 45.093 99.941 118.369 1.00 50.97 C
ATOM 19 N4 C A1088 46.039 99.206 117.779 1.00 49.11 N
ATOM 20 C5 C A1088 44.932 101.318 118.032 1.00 51.15 C
ATOM 21 C6 C A1088 43.984 102.009 118.687 1.00 51.68 C
ATOM 22 P U A1089 44.287 105.058 123.846 1.00 61.35 P
ATOM 23 OP1 U A1089 43.940 105.395 125.250 1.00 61.01 O
ATOM 24 OP2 U A1089 44.641 106.143 122.890 1.00 61.49 O
ATOM 25 O5' U A1089 45.490 104.027 123.878 1.00 63.36 O
TER
ATOM 1 O3' C B1086 49.827 101.880 115.395 1.00 46.47 O
ATOM 2 P U B1087 48.648 101.542 116.431 1.00 46.63 P
ATOM 3 OP1 U B1087 49.265 101.537 117.784 1.00 45.14 O
ATOM 4 OP2 U B1087 47.943 100.325 115.942 1.00 45.36 O
ATOM 5 O5' U B1087 47.679 102.799 116.331 1.00 44.45 O
ATOM 6 C5' U B1087 48.145 104.099 116.695 1.00 44.44 C
ATOM 7 C4' U B1087 47.057 105.124 116.502 1.00 46.62 C
ATOM 8 O4' U B1087 46.770 105.278 115.083 1.00 47.50 O
ATOM 9 C3' U B1087 45.721 104.821 117.174 1.00 48.20 C
ATOM 10 O3' U B1087 45.164 106.036 117.622 1.00 50.00 O
ATOM 11 C2' U B1087 44.874 104.302 116.022 1.00 47.77 C
ATOM 12 O2' U B1087 43.497 104.525 116.226 1.00 49.95 O
ATOM 13 C1' U B1087 45.379 105.178 114.883 1.00 46.27 C
ATOM 14 N1 U B1087 45.123 104.683 113.523 1.00 45.32 N
ATOM 15 C2 U B1087 44.582 105.584 112.624 1.00 45.20 C
ATOM 16 O2 U B1087 44.318 106.734 112.919 1.00 47.26 O
ATOM 17 N3 U B1087 44.360 105.093 111.366 1.00 43.98 N
ATOM 18 C4 U B1087 44.607 103.822 110.921 1.00 44.76 C
ATOM 19 O4 U B1087 44.346 103.541 109.755 1.00 45.89 O
ATOM 20 C5 U B1087 45.163 102.935 111.907 1.00 45.51 C
ATOM 21 C6 U B1087 45.399 103.388 113.144 1.00 45.15 C
ATOM 22 P C B1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 23 OP1 C B1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 24 OP2 C B1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 25 O5' C B1088 44.349 105.344 119.891 1.00 53.50 O
TER
ATOM 2 P C A1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 3 OP1 C A1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 4 OP2 C A1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 5 O5' C A1088 44.349 105.344 119.891 1.00 53.50 O
ATOM 6 C5' C A1088 43.024 105.676 120.350 1.00 51.82 C
ATOM 7 C4' C A1088 42.348 104.450 120.918 1.00 53.13 C
ATOM 8 O4' C A1088 42.100 103.486 119.860 1.00 50.56 O
ATOM 9 C3' C A1088 43.159 103.667 121.936 1.00 54.88 C
ATOM 10 O3' C A1088 43.059 104.222 123.238 1.00 58.19 O
ATOM 11 C2' C A1088 42.496 102.300 121.884 1.00 54.20 C
ATOM 12 O2' C A1088 41.311 102.258 122.651 1.00 54.58 O
ATOM 13 C1' C A1088 42.180 102.172 120.388 1.00 51.75 C
ATOM 14 N1 C A1088 43.204 101.409 119.638 1.00 50.74 N
ATOM 15 C2 C A1088 43.372 100.047 119.925 1.00 49.83 C
ATOM 16 O2 C A1088 42.638 99.515 120.770 1.00 51.48 O
ATOM 17 N3 C A1088 44.323 99.345 119.278 1.00 49.89 N
ATOM 18 C4 C A1088 45.093 99.941 118.369 1.00 50.97 C
ATOM 19 N4 C A1088 46.039 99.206 117.779 1.00 49.11 N
ATOM 20 C5 C A1088 44.932 101.318 118.032 1.00 51.15 C
ATOM 21 C6 C A1088 43.984 102.009 118.687 1.00 51.68 C
ATOM 22 P U A1089 44.287 105.058 123.846 1.00 61.35 P
ATOM 23 OP1 U A1089 43.940 105.395 125.250 1.00 61.01 O
ATOM 24 OP2 U A1089 44.641 106.143 122.890 1.00 61.49 O
ATOM 25 O5' U A1089 45.490 104.027 123.878 1.00 63.36 O
TER
ATOM 1 O3' C B1086 49.827 101.880 115.395 1.00 46.47 O
ATOM 2 P U B1087 48.648 101.542 116.431 1.00 46.63 P
ATOM 3 OP1 U B1087 49.265 101.537 117.784 1.00 45.14 O
ATOM 4 OP2 U B1087 47.943 100.325 115.942 1.00 45.36 O
ATOM 5 O5' U B1087 47.679 102.799 116.331 1.00 44.45 O
ATOM 6 C5' U B1087 48.145 104.099 116.695 1.00 44.44 C
ATOM 7 C4' U B1087 47.057 105.124 116.502 1.00 46.62 C
ATOM 8 O4' U B1087 46.770 105.278 115.083 1.00 47.50 O
ATOM 9 C3' U B1087 45.721 104.821 117.174 1.00 48.20 C
ATOM 10 O3' U B1087 45.164 106.036 117.622 1.00 50.00 O
ATOM 11 C2' U B1087 44.874 104.302 116.022 1.00 47.77 C
ATOM 12 O2' U B1087 43.497 104.525 116.226 1.00 49.95 O
ATOM 13 C1' U B1087 45.379 105.178 114.883 1.00 46.27 C
ATOM 14 N1 U B1087 45.123 104.683 113.523 1.00 45.32 N
ATOM 15 C2 U B1087 44.582 105.584 112.624 1.00 45.20 C
ATOM 16 O2 U B1087 44.318 106.734 112.919 1.00 47.26 O
ATOM 17 N3 U B1087 44.360 105.093 111.366 1.00 43.98 N
ATOM 18 C4 U B1087 44.607 103.822 110.921 1.00 44.76 C
ATOM 19 O4 U B1087 44.346 103.541 109.755 1.00 45.89 O
ATOM 20 C5 U B1087 45.163 102.935 111.907 1.00 45.51 C
ATOM 21 C6 U B1087 45.399 103.388 113.144 1.00 45.15 C
ATOM 22 P C B1088 45.275 106.425 119.166 1.00 53.83 P
ATOM 23 OP1 C B1088 44.682 107.779 119.317 1.00 52.79 O
ATOM 24 OP2 C B1088 46.686 106.192 119.578 1.00 52.89 O
ATOM 25 O5' C B1088 44.349 105.344 119.891 1.00 53.50 O
TER
Atoms:
C2: (43.372,100.047,119.925)
OP1: (44.682,107.779,119.317)
OP2: (46.686,106.192,119.578)
C4: (45.093,99.941,118.369)
O5': (44.349,105.344,119.891)
C3': (43.159,103.667,121.936)
C1': (42.180,102.172,120.388)
O4': (42.100,103.486,119.860)
C5': (43.024,105.676,120.350)
P: (45.275,106.425,119.166)
O2: (42.638,99.515,120.770)
C4': (42.348,104.450,120.918)
C2': (42.496,102.300,121.884)
O2': (41.311,102.258,122.651)
N1: (43.204,101.409,119.638)
N3: (44.323,99.345,119.278)
N4: (46.039,99.206,117.779)
C6: (43.984,102.009,118.687)
C5: (44.932,101.318,118.032)
O3': (43.059,104.222,123.238)
OP1: (44.682,107.779,119.317)
OP2: (46.686,106.192,119.578)
C4: (45.093,99.941,118.369)
O5': (44.349,105.344,119.891)
C3': (43.159,103.667,121.936)
C1': (42.180,102.172,120.388)
O4': (42.100,103.486,119.860)
C5': (43.024,105.676,120.350)
P: (45.275,106.425,119.166)
O2: (42.638,99.515,120.770)
C4': (42.348,104.450,120.918)
C2': (42.496,102.300,121.884)
O2': (41.311,102.258,122.651)
N1: (43.204,101.409,119.638)
N3: (44.323,99.345,119.278)
N4: (46.039,99.206,117.779)
C6: (43.984,102.009,118.687)
C5: (44.932,101.318,118.032)
O3': (43.059,104.222,123.238)
C4: (44.607,103.822,110.921)
N3: (44.360,105.093,111.366)
OP1: (49.265,101.537,117.784)
OP2: (47.943,100.325,115.942)
C2: (44.582,105.584,112.624)
C1': (45.379,105.178,114.883)
C3': (45.721,104.821,117.174)
O5': (47.679,102.799,116.331)
O4': (46.770,105.278,115.083)
C5': (48.145,104.099,116.695)
P: (48.648,101.542,116.431)
C4': (47.057,105.124,116.502)
C2': (44.874,104.302,116.022)
O2': (43.497,104.525,116.226)
N1: (45.123,104.683,113.523)
O4: (44.346,103.541,109.755)
O2: (44.318,106.734,112.919)
C6: (45.399,103.388,113.144)
C5: (45.163,102.935,111.907)
O3': (45.164,106.036,117.622)
N3: (44.360,105.093,111.366)
OP1: (49.265,101.537,117.784)
OP2: (47.943,100.325,115.942)
C2: (44.582,105.584,112.624)
C1': (45.379,105.178,114.883)
C3': (45.721,104.821,117.174)
O5': (47.679,102.799,116.331)
O4': (46.770,105.278,115.083)
C5': (48.145,104.099,116.695)
P: (48.648,101.542,116.431)
C4': (47.057,105.124,116.502)
C2': (44.874,104.302,116.022)
O2': (43.497,104.525,116.226)
N1: (45.123,104.683,113.523)
O4: (44.346,103.541,109.755)
O2: (44.318,106.734,112.919)
C6: (45.399,103.388,113.144)
C5: (45.163,102.935,111.907)
O3': (45.164,106.036,117.622)
Image (generated by PyMOL):