Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDH:R7:R6
Extra
PDB:
ATOM 1 O3' U A 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 2 P C A 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 3 OP1 C A 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 4 OP2 C A 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 5 O5' C A 7 20.719 105.080 20.438 0.60 54.41 O
ATOM 6 C5' C A 7 19.541 104.251 20.451 0.60 50.84 C
ATOM 7 C4' C A 7 18.742 104.530 21.695 0.60 47.35 C
ATOM 8 O4' C A 7 19.480 104.037 22.843 0.60 44.62 O
ATOM 9 C3' C A 7 18.466 106.007 21.944 0.60 46.72 C
ATOM 10 O3' C A 7 17.190 106.123 22.569 0.60 50.79 O
ATOM 11 C2' C A 7 19.562 106.406 22.937 0.60 44.74 C
ATOM 12 O2' C A 7 19.110 107.427 23.817 0.60 47.24 O
ATOM 13 C1' C A 7 19.800 105.105 23.708 0.60 41.80 C
ATOM 14 N1 C A 7 21.193 104.895 24.125 0.60 36.96 N
ATOM 15 C2 C A 7 21.556 105.136 25.462 0.60 35.60 C
ATOM 16 O2 C A 7 20.712 105.615 26.241 0.60 35.31 O
ATOM 17 N3 C A 7 22.820 104.856 25.866 0.60 34.27 N
ATOM 18 C4 C A 7 23.712 104.382 24.986 0.60 33.60 C
ATOM 19 N4 C A 7 24.942 104.109 25.427 0.60 32.20 N
ATOM 20 C5 C A 7 23.385 104.172 23.610 0.60 33.89 C
ATOM 21 C6 C A 7 22.122 104.439 23.232 0.60 34.92 C
ATOM 22 P A A 8 15.885 106.482 21.692 0.60 50.93 P
ATOM 23 OP1 A A 8 15.875 105.618 20.461 0.60 51.50 O
ATOM 24 OP2 A A 8 15.797 107.993 21.547 0.60 50.93 O
ATOM 25 O5' A A 8 14.696 106.015 22.654 0.60 49.67 O
TER
ATOM 1 O3' A B 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 2 P U B 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 3 OP1 U B 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 4 OP2 U B 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 5 O5' U B 6 25.502 103.446 21.189 0.60 48.92 O
ATOM 6 C5' U B 6 25.655 104.433 20.141 0.60 49.43 C
ATOM 7 C4' U B 6 24.657 104.175 19.030 0.60 50.47 C
ATOM 8 O4' U B 6 25.053 103.002 18.244 0.60 49.91 O
ATOM 9 C3' U B 6 23.216 103.923 19.484 0.60 50.96 C
ATOM 10 O3' U B 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 11 C2' U B 6 23.100 102.397 19.372 0.60 50.12 C
ATOM 12 O2' U B 6 21.786 101.896 19.226 0.60 50.23 O
ATOM 13 C1' U B 6 23.943 102.135 18.125 0.60 48.17 C
ATOM 14 N1 U B 6 24.404 100.762 17.864 0.00 44.45 N
ATOM 15 C2 U B 6 24.382 100.338 16.543 0.00 43.06 C
ATOM 16 O2 U B 6 24.017 101.050 15.623 0.00 42.42 O
ATOM 17 N3 U B 6 24.802 99.048 16.339 0.00 42.08 N
ATOM 18 C4 U B 6 25.235 98.155 17.293 0.00 41.43 C
ATOM 19 O4 U B 6 25.567 97.018 16.951 0.00 40.13 O
ATOM 20 C5 U B 6 25.237 98.666 18.634 0.00 41.68 C
ATOM 21 C6 U B 6 24.830 99.924 18.867 0.00 43.35 C
ATOM 22 P C B 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 23 OP1 C B 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 24 OP2 C B 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 25 O5' C B 7 20.719 105.080 20.438 0.60 54.41 O
TER
ATOM 2 P C A 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 3 OP1 C A 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 4 OP2 C A 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 5 O5' C A 7 20.719 105.080 20.438 0.60 54.41 O
ATOM 6 C5' C A 7 19.541 104.251 20.451 0.60 50.84 C
ATOM 7 C4' C A 7 18.742 104.530 21.695 0.60 47.35 C
ATOM 8 O4' C A 7 19.480 104.037 22.843 0.60 44.62 O
ATOM 9 C3' C A 7 18.466 106.007 21.944 0.60 46.72 C
ATOM 10 O3' C A 7 17.190 106.123 22.569 0.60 50.79 O
ATOM 11 C2' C A 7 19.562 106.406 22.937 0.60 44.74 C
ATOM 12 O2' C A 7 19.110 107.427 23.817 0.60 47.24 O
ATOM 13 C1' C A 7 19.800 105.105 23.708 0.60 41.80 C
ATOM 14 N1 C A 7 21.193 104.895 24.125 0.60 36.96 N
ATOM 15 C2 C A 7 21.556 105.136 25.462 0.60 35.60 C
ATOM 16 O2 C A 7 20.712 105.615 26.241 0.60 35.31 O
ATOM 17 N3 C A 7 22.820 104.856 25.866 0.60 34.27 N
ATOM 18 C4 C A 7 23.712 104.382 24.986 0.60 33.60 C
ATOM 19 N4 C A 7 24.942 104.109 25.427 0.60 32.20 N
ATOM 20 C5 C A 7 23.385 104.172 23.610 0.60 33.89 C
ATOM 21 C6 C A 7 22.122 104.439 23.232 0.60 34.92 C
ATOM 22 P A A 8 15.885 106.482 21.692 0.60 50.93 P
ATOM 23 OP1 A A 8 15.875 105.618 20.461 0.60 51.50 O
ATOM 24 OP2 A A 8 15.797 107.993 21.547 0.60 50.93 O
ATOM 25 O5' A A 8 14.696 106.015 22.654 0.60 49.67 O
TER
ATOM 1 O3' A B 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 2 P U B 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 3 OP1 U B 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 4 OP2 U B 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 5 O5' U B 6 25.502 103.446 21.189 0.60 48.92 O
ATOM 6 C5' U B 6 25.655 104.433 20.141 0.60 49.43 C
ATOM 7 C4' U B 6 24.657 104.175 19.030 0.60 50.47 C
ATOM 8 O4' U B 6 25.053 103.002 18.244 0.60 49.91 O
ATOM 9 C3' U B 6 23.216 103.923 19.484 0.60 50.96 C
ATOM 10 O3' U B 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 11 C2' U B 6 23.100 102.397 19.372 0.60 50.12 C
ATOM 12 O2' U B 6 21.786 101.896 19.226 0.60 50.23 O
ATOM 13 C1' U B 6 23.943 102.135 18.125 0.60 48.17 C
ATOM 14 N1 U B 6 24.404 100.762 17.864 0.00 44.45 N
ATOM 15 C2 U B 6 24.382 100.338 16.543 0.00 43.06 C
ATOM 16 O2 U B 6 24.017 101.050 15.623 0.00 42.42 O
ATOM 17 N3 U B 6 24.802 99.048 16.339 0.00 42.08 N
ATOM 18 C4 U B 6 25.235 98.155 17.293 0.00 41.43 C
ATOM 19 O4 U B 6 25.567 97.018 16.951 0.00 40.13 O
ATOM 20 C5 U B 6 25.237 98.666 18.634 0.00 41.68 C
ATOM 21 C6 U B 6 24.830 99.924 18.867 0.00 43.35 C
ATOM 22 P C B 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 23 OP1 C B 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 24 OP2 C B 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 25 O5' C B 7 20.719 105.080 20.438 0.60 54.41 O
TER
Atoms:
C2: (21.556,105.136,25.462)
OP1: (20.119,105.711,18.083)
OP2: (22.002,106.970,19.366)
C4: (23.712,104.382,24.986)
O5': (20.719,105.080,20.438)
C3': (18.466,106.007,21.944)
C1': (19.800,105.105,23.708)
O4': (19.480,104.037,22.843)
C5': (19.541,104.251,20.451)
P: (21.271,105.687,19.065)
O2: (20.712,105.615,26.241)
C4': (18.742,104.530,21.695)
C2': (19.562,106.406,22.937)
O2': (19.110,107.427,23.817)
N1: (21.193,104.895,24.125)
N3: (22.820,104.856,25.866)
N4: (24.942,104.109,25.427)
C6: (22.122,104.439,23.232)
C5: (23.385,104.172,23.610)
O3': (17.190,106.123,22.569)
OP1: (20.119,105.711,18.083)
OP2: (22.002,106.970,19.366)
C4: (23.712,104.382,24.986)
O5': (20.719,105.080,20.438)
C3': (18.466,106.007,21.944)
C1': (19.800,105.105,23.708)
O4': (19.480,104.037,22.843)
C5': (19.541,104.251,20.451)
P: (21.271,105.687,19.065)
O2: (20.712,105.615,26.241)
C4': (18.742,104.530,21.695)
C2': (19.562,106.406,22.937)
O2': (19.110,107.427,23.817)
N1: (21.193,104.895,24.125)
N3: (22.820,104.856,25.866)
N4: (24.942,104.109,25.427)
C6: (22.122,104.439,23.232)
C5: (23.385,104.172,23.610)
O3': (17.190,106.123,22.569)
C4: (25.235,98.155,17.293)
N3: (24.802,99.048,16.339)
OP1: (27.986,102.972,21.186)
OP2: (26.750,103.643,23.385)
C2: (24.382,100.338,16.543)
C1': (23.943,102.135,18.125)
C3': (23.216,103.923,19.484)
O5': (25.502,103.446,21.189)
O4': (25.053,103.002,18.244)
C5': (25.655,104.433,20.141)
P: (26.752,102.938,22.049)
C4': (24.657,104.175,19.030)
C2': (23.100,102.397,19.372)
O2': (21.786,101.896,19.226)
N1: (24.404,100.762,17.864)
O4: (25.567,97.018,16.951)
O2: (24.017,101.050,15.623)
C6: (24.830,99.924,18.867)
C5: (25.237,98.666,18.634)
O3': (22.324,104.560,18.552)
N3: (24.802,99.048,16.339)
OP1: (27.986,102.972,21.186)
OP2: (26.750,103.643,23.385)
C2: (24.382,100.338,16.543)
C1': (23.943,102.135,18.125)
C3': (23.216,103.923,19.484)
O5': (25.502,103.446,21.189)
O4': (25.053,103.002,18.244)
C5': (25.655,104.433,20.141)
P: (26.752,102.938,22.049)
C4': (24.657,104.175,19.030)
C2': (23.100,102.397,19.372)
O2': (21.786,101.896,19.226)
N1: (24.404,100.762,17.864)
O4: (25.567,97.018,16.951)
O2: (24.017,101.050,15.623)
C6: (24.830,99.924,18.867)
C5: (25.237,98.666,18.634)
O3': (22.324,104.560,18.552)
Image (generated by PyMOL):