Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1279:A1278
Extra
PDB:
ATOM 1 O3' U A1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 2 P C A1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 3 OP1 C A1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 4 OP2 C A1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 5 O5' C A1279 24.617 -78.260 -9.660 1.00 35.86 O
ATOM 6 C5' C A1279 24.363 -77.626 -8.431 1.00 34.41 C
ATOM 7 C4' C A1279 25.270 -76.449 -8.231 1.00 35.43 C
ATOM 8 O4' C A1279 26.560 -76.896 -7.770 1.00 31.54 O
ATOM 9 C3' C A1279 25.569 -75.619 -9.461 1.00 32.14 C
ATOM 10 O3' C A1279 24.547 -74.680 -9.723 1.00 36.29 O
ATOM 11 C2' C A1279 26.884 -74.965 -9.093 1.00 36.56 C
ATOM 12 O2' C A1279 26.651 -73.856 -8.244 1.00 40.58 O
ATOM 13 C1' C A1279 27.556 -76.054 -8.267 1.00 33.48 C
ATOM 14 N1 C A1279 28.483 -76.867 -9.053 1.00 37.17 N
ATOM 15 C2 C A1279 29.629 -76.294 -9.588 1.00 35.87 C
ATOM 16 O2 C A1279 29.831 -75.075 -9.445 1.00 35.69 O
ATOM 17 N3 C A1279 30.473 -77.101 -10.258 1.00 33.30 N
ATOM 18 C4 C A1279 30.199 -78.396 -10.383 1.00 34.66 C
ATOM 19 N4 C A1279 31.044 -79.144 -11.069 1.00 42.08 N
ATOM 20 C5 C A1279 29.057 -79.011 -9.836 1.00 34.18 C
ATOM 21 C6 C A1279 28.240 -78.201 -9.171 1.00 36.04 C
ATOM 22 P A A1280 24.220 -74.210 -11.218 1.00 35.88 P
ATOM 23 OP1 A A1280 23.044 -73.299 -11.145 1.00 36.53 O
ATOM 24 OP2 A A1280 24.121 -75.431 -12.046 1.00 38.13 O
ATOM 25 O5' A A1280 25.511 -73.388 -11.612 1.00 32.26 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
ATOM 2 P C A1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 3 OP1 C A1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 4 OP2 C A1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 5 O5' C A1279 24.617 -78.260 -9.660 1.00 35.86 O
ATOM 6 C5' C A1279 24.363 -77.626 -8.431 1.00 34.41 C
ATOM 7 C4' C A1279 25.270 -76.449 -8.231 1.00 35.43 C
ATOM 8 O4' C A1279 26.560 -76.896 -7.770 1.00 31.54 O
ATOM 9 C3' C A1279 25.569 -75.619 -9.461 1.00 32.14 C
ATOM 10 O3' C A1279 24.547 -74.680 -9.723 1.00 36.29 O
ATOM 11 C2' C A1279 26.884 -74.965 -9.093 1.00 36.56 C
ATOM 12 O2' C A1279 26.651 -73.856 -8.244 1.00 40.58 O
ATOM 13 C1' C A1279 27.556 -76.054 -8.267 1.00 33.48 C
ATOM 14 N1 C A1279 28.483 -76.867 -9.053 1.00 37.17 N
ATOM 15 C2 C A1279 29.629 -76.294 -9.588 1.00 35.87 C
ATOM 16 O2 C A1279 29.831 -75.075 -9.445 1.00 35.69 O
ATOM 17 N3 C A1279 30.473 -77.101 -10.258 1.00 33.30 N
ATOM 18 C4 C A1279 30.199 -78.396 -10.383 1.00 34.66 C
ATOM 19 N4 C A1279 31.044 -79.144 -11.069 1.00 42.08 N
ATOM 20 C5 C A1279 29.057 -79.011 -9.836 1.00 34.18 C
ATOM 21 C6 C A1279 28.240 -78.201 -9.171 1.00 36.04 C
ATOM 22 P A A1280 24.220 -74.210 -11.218 1.00 35.88 P
ATOM 23 OP1 A A1280 23.044 -73.299 -11.145 1.00 36.53 O
ATOM 24 OP2 A A1280 24.121 -75.431 -12.046 1.00 38.13 O
ATOM 25 O5' A A1280 25.511 -73.388 -11.612 1.00 32.26 O
TER
ATOM 1 O3' G B1277 30.529 -83.018 -7.876 1.00 40.14 O
ATOM 2 P U B1278 29.859 -82.992 -9.316 1.00 35.50 P
ATOM 3 OP1 U B1278 30.005 -84.356 -9.892 1.00 28.18 O
ATOM 4 OP2 U B1278 30.435 -81.837 -10.036 1.00 34.22 O
ATOM 5 O5' U B1278 28.342 -82.711 -8.970 1.00 31.51 O
ATOM 6 C5' U B1278 27.394 -82.436 -9.985 1.00 32.41 C
ATOM 7 C4' U B1278 26.013 -82.257 -9.404 1.00 30.35 C
ATOM 8 O4' U B1278 25.831 -83.211 -8.330 1.00 28.95 O
ATOM 9 C3' U B1278 25.748 -80.900 -8.789 1.00 29.05 C
ATOM 10 O3' U B1278 24.367 -80.604 -8.906 1.00 26.56 O
ATOM 11 C2' U B1278 26.114 -81.127 -7.332 1.00 28.07 C
ATOM 12 O2' U B1278 25.548 -80.213 -6.431 1.00 37.65 O
ATOM 13 C1' U B1278 25.605 -82.537 -7.115 1.00 24.66 C
ATOM 14 N1 U B1278 26.310 -83.278 -6.069 1.00 29.75 N
ATOM 15 C2 U B1278 25.540 -83.985 -5.196 1.00 33.56 C
ATOM 16 O2 U B1278 24.349 -83.949 -5.287 1.00 45.94 O
ATOM 17 N3 U B1278 26.181 -84.716 -4.235 1.00 38.63 N
ATOM 18 C4 U B1278 27.541 -84.803 -4.088 1.00 39.37 C
ATOM 19 O4 U B1278 27.988 -85.474 -3.173 1.00 38.45 O
ATOM 20 C5 U B1278 28.304 -84.061 -5.055 1.00 40.90 C
ATOM 21 C6 U B1278 27.683 -83.347 -6.006 1.00 39.06 C
ATOM 22 P C B1279 23.856 -79.589 -10.036 1.00 40.83 P
ATOM 23 OP1 C B1279 22.396 -79.404 -9.816 1.00 58.52 O
ATOM 24 OP2 C B1279 24.335 -80.088 -11.364 1.00 29.76 O
ATOM 25 O5' C B1279 24.617 -78.260 -9.660 1.00 35.86 O
TER
Atoms:
C2: (29.629,-76.294,-9.588)
OP1: (22.396,-79.404,-9.816)
OP2: (24.335,-80.088,-11.364)
C4: (30.199,-78.396,-10.383)
O5': (24.617,-78.260,-9.660)
C3': (25.569,-75.619,-9.461)
C1': (27.556,-76.054,-8.267)
O4': (26.560,-76.896,-7.770)
C5': (24.363,-77.626,-8.431)
P: (23.856,-79.589,-10.036)
O2: (29.831,-75.075,-9.445)
C4': (25.270,-76.449,-8.231)
C2': (26.884,-74.965,-9.093)
O2': (26.651,-73.856,-8.244)
N1: (28.483,-76.867,-9.053)
N3: (30.473,-77.101,-10.258)
N4: (31.044,-79.144,-11.069)
C6: (28.240,-78.201,-9.171)
C5: (29.057,-79.011,-9.836)
O3': (24.547,-74.680,-9.723)
OP1: (22.396,-79.404,-9.816)
OP2: (24.335,-80.088,-11.364)
C4: (30.199,-78.396,-10.383)
O5': (24.617,-78.260,-9.660)
C3': (25.569,-75.619,-9.461)
C1': (27.556,-76.054,-8.267)
O4': (26.560,-76.896,-7.770)
C5': (24.363,-77.626,-8.431)
P: (23.856,-79.589,-10.036)
O2: (29.831,-75.075,-9.445)
C4': (25.270,-76.449,-8.231)
C2': (26.884,-74.965,-9.093)
O2': (26.651,-73.856,-8.244)
N1: (28.483,-76.867,-9.053)
N3: (30.473,-77.101,-10.258)
N4: (31.044,-79.144,-11.069)
C6: (28.240,-78.201,-9.171)
C5: (29.057,-79.011,-9.836)
O3': (24.547,-74.680,-9.723)
C4: (27.541,-84.803,-4.088)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
N3: (26.181,-84.716,-4.235)
OP1: (30.005,-84.356,-9.892)
OP2: (30.435,-81.837,-10.036)
C2: (25.540,-83.985,-5.196)
C1': (25.605,-82.537,-7.115)
C3': (25.748,-80.900,-8.789)
O5': (28.342,-82.711,-8.970)
O4': (25.831,-83.211,-8.330)
C5': (27.394,-82.436,-9.985)
P: (29.859,-82.992,-9.316)
C4': (26.013,-82.257,-9.404)
C2': (26.114,-81.127,-7.332)
O2': (25.548,-80.213,-6.431)
N1: (26.310,-83.278,-6.069)
O4: (27.988,-85.474,-3.173)
O2: (24.349,-83.949,-5.287)
C6: (27.683,-83.347,-6.006)
C5: (28.304,-84.061,-5.055)
O3': (24.367,-80.604,-8.906)
Image (generated by PyMOL):