Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H58:H57
Extra
PDB:
ATOM 1 O3' U A 57 -13.069 58.845 80.055 1.00 68.76 O
ATOM 2 P C A 58 -12.780 60.390 79.735 1.00 69.47 P
ATOM 3 OP1 C A 58 -13.540 60.771 78.517 1.00 68.94 O
ATOM 4 OP2 C A 58 -11.307 60.575 79.769 1.00 69.13 O
ATOM 5 O5' C A 58 -13.402 61.161 80.983 1.00 68.06 O
ATOM 6 C5' C A 58 -14.108 62.382 80.803 1.00 67.98 C
ATOM 7 C4' C A 58 -13.698 63.386 81.854 1.00 68.38 C
ATOM 8 O4' C A 58 -14.148 62.946 83.161 1.00 67.72 O
ATOM 9 C3' C A 58 -12.203 63.576 82.039 1.00 69.41 C
ATOM 10 O3' C A 58 -11.661 64.446 81.053 1.00 69.21 O
ATOM 11 C2' C A 58 -12.136 64.186 83.433 1.00 69.74 C
ATOM 12 O2' C A 58 -12.423 65.570 83.439 1.00 71.60 O
ATOM 13 C1' C A 58 -13.252 63.425 84.153 1.00 68.63 C
ATOM 14 N1 C A 58 -12.753 62.281 84.932 1.00 68.27 N
ATOM 15 C2 C A 58 -12.223 62.521 86.203 1.00 67.11 C
ATOM 16 O2 C A 58 -12.194 63.685 86.627 1.00 65.09 O
ATOM 17 N3 C A 58 -11.756 61.483 86.933 1.00 67.06 N
ATOM 18 C4 C A 58 -11.803 60.245 86.438 1.00 67.04 C
ATOM 19 N4 C A 58 -11.327 59.253 87.195 1.00 66.31 N
ATOM 20 C5 C A 58 -12.338 59.970 85.145 1.00 67.97 C
ATOM 21 C6 C A 58 -12.799 61.009 84.433 1.00 68.91 C
ATOM 22 P C A 59 -10.134 64.262 80.586 1.00 68.27 P
ATOM 23 OP1 C A 59 -9.917 65.068 79.358 1.00 68.97 O
ATOM 24 OP2 C A 59 -9.849 62.805 80.568 1.00 70.06 O
ATOM 25 O5' C A 59 -9.289 64.916 81.766 1.00 66.68 O
TER
ATOM 1 O3' G B 56 -10.293 54.713 84.443 1.00 64.43 O
ATOM 2 P U B 57 -10.595 56.276 84.672 1.00 64.35 P
ATOM 3 OP1 U B 57 -9.321 57.024 84.524 1.00 65.51 O
ATOM 4 OP2 U B 57 -11.378 56.408 85.925 1.00 63.75 O
ATOM 5 O5' U B 57 -11.543 56.672 83.455 1.00 65.29 O
ATOM 6 C5' U B 57 -11.117 56.494 82.109 1.00 66.82 C
ATOM 7 C4' U B 57 -12.219 56.891 81.160 1.00 67.74 C
ATOM 8 O4' U B 57 -13.361 56.016 81.360 1.00 66.40 O
ATOM 9 C3' U B 57 -12.724 58.320 81.329 1.00 68.45 C
ATOM 10 O3' U B 57 -13.069 58.845 80.055 1.00 68.76 O
ATOM 11 C2' U B 57 -13.988 58.142 82.160 1.00 68.07 C
ATOM 12 O2' U B 57 -14.937 59.173 81.974 1.00 67.96 O
ATOM 13 C1' U B 57 -14.501 56.788 81.668 1.00 67.61 C
ATOM 14 N1 U B 57 -15.287 56.070 82.680 1.00 67.19 N
ATOM 15 C2 U B 57 -16.645 55.937 82.464 1.00 67.19 C
ATOM 16 O2 U B 57 -17.202 56.367 81.468 1.00 67.17 O
ATOM 17 N3 U B 57 -17.327 55.277 83.458 1.00 66.91 N
ATOM 18 C4 U B 57 -16.798 54.749 84.618 1.00 66.85 C
ATOM 19 O4 U B 57 -17.544 54.190 85.424 1.00 65.99 O
ATOM 20 C5 U B 57 -15.386 54.922 84.763 1.00 67.19 C
ATOM 21 C6 U B 57 -14.695 55.559 83.811 1.00 67.74 C
ATOM 22 P C B 58 -12.780 60.390 79.735 1.00 69.47 P
ATOM 23 OP1 C B 58 -13.540 60.771 78.517 1.00 68.94 O
ATOM 24 OP2 C B 58 -11.307 60.575 79.769 1.00 69.13 O
ATOM 25 O5' C B 58 -13.402 61.161 80.983 1.00 68.06 O
TER
ATOM 2 P C A 58 -12.780 60.390 79.735 1.00 69.47 P
ATOM 3 OP1 C A 58 -13.540 60.771 78.517 1.00 68.94 O
ATOM 4 OP2 C A 58 -11.307 60.575 79.769 1.00 69.13 O
ATOM 5 O5' C A 58 -13.402 61.161 80.983 1.00 68.06 O
ATOM 6 C5' C A 58 -14.108 62.382 80.803 1.00 67.98 C
ATOM 7 C4' C A 58 -13.698 63.386 81.854 1.00 68.38 C
ATOM 8 O4' C A 58 -14.148 62.946 83.161 1.00 67.72 O
ATOM 9 C3' C A 58 -12.203 63.576 82.039 1.00 69.41 C
ATOM 10 O3' C A 58 -11.661 64.446 81.053 1.00 69.21 O
ATOM 11 C2' C A 58 -12.136 64.186 83.433 1.00 69.74 C
ATOM 12 O2' C A 58 -12.423 65.570 83.439 1.00 71.60 O
ATOM 13 C1' C A 58 -13.252 63.425 84.153 1.00 68.63 C
ATOM 14 N1 C A 58 -12.753 62.281 84.932 1.00 68.27 N
ATOM 15 C2 C A 58 -12.223 62.521 86.203 1.00 67.11 C
ATOM 16 O2 C A 58 -12.194 63.685 86.627 1.00 65.09 O
ATOM 17 N3 C A 58 -11.756 61.483 86.933 1.00 67.06 N
ATOM 18 C4 C A 58 -11.803 60.245 86.438 1.00 67.04 C
ATOM 19 N4 C A 58 -11.327 59.253 87.195 1.00 66.31 N
ATOM 20 C5 C A 58 -12.338 59.970 85.145 1.00 67.97 C
ATOM 21 C6 C A 58 -12.799 61.009 84.433 1.00 68.91 C
ATOM 22 P C A 59 -10.134 64.262 80.586 1.00 68.27 P
ATOM 23 OP1 C A 59 -9.917 65.068 79.358 1.00 68.97 O
ATOM 24 OP2 C A 59 -9.849 62.805 80.568 1.00 70.06 O
ATOM 25 O5' C A 59 -9.289 64.916 81.766 1.00 66.68 O
TER
ATOM 1 O3' G B 56 -10.293 54.713 84.443 1.00 64.43 O
ATOM 2 P U B 57 -10.595 56.276 84.672 1.00 64.35 P
ATOM 3 OP1 U B 57 -9.321 57.024 84.524 1.00 65.51 O
ATOM 4 OP2 U B 57 -11.378 56.408 85.925 1.00 63.75 O
ATOM 5 O5' U B 57 -11.543 56.672 83.455 1.00 65.29 O
ATOM 6 C5' U B 57 -11.117 56.494 82.109 1.00 66.82 C
ATOM 7 C4' U B 57 -12.219 56.891 81.160 1.00 67.74 C
ATOM 8 O4' U B 57 -13.361 56.016 81.360 1.00 66.40 O
ATOM 9 C3' U B 57 -12.724 58.320 81.329 1.00 68.45 C
ATOM 10 O3' U B 57 -13.069 58.845 80.055 1.00 68.76 O
ATOM 11 C2' U B 57 -13.988 58.142 82.160 1.00 68.07 C
ATOM 12 O2' U B 57 -14.937 59.173 81.974 1.00 67.96 O
ATOM 13 C1' U B 57 -14.501 56.788 81.668 1.00 67.61 C
ATOM 14 N1 U B 57 -15.287 56.070 82.680 1.00 67.19 N
ATOM 15 C2 U B 57 -16.645 55.937 82.464 1.00 67.19 C
ATOM 16 O2 U B 57 -17.202 56.367 81.468 1.00 67.17 O
ATOM 17 N3 U B 57 -17.327 55.277 83.458 1.00 66.91 N
ATOM 18 C4 U B 57 -16.798 54.749 84.618 1.00 66.85 C
ATOM 19 O4 U B 57 -17.544 54.190 85.424 1.00 65.99 O
ATOM 20 C5 U B 57 -15.386 54.922 84.763 1.00 67.19 C
ATOM 21 C6 U B 57 -14.695 55.559 83.811 1.00 67.74 C
ATOM 22 P C B 58 -12.780 60.390 79.735 1.00 69.47 P
ATOM 23 OP1 C B 58 -13.540 60.771 78.517 1.00 68.94 O
ATOM 24 OP2 C B 58 -11.307 60.575 79.769 1.00 69.13 O
ATOM 25 O5' C B 58 -13.402 61.161 80.983 1.00 68.06 O
TER
Atoms:
C2: (-12.223,62.521,86.203)
OP1: (-13.540,60.771,78.517)
OP2: (-11.307,60.575,79.769)
C4: (-11.803,60.245,86.438)
O5': (-13.402,61.161,80.983)
C3': (-12.203,63.576,82.039)
C1': (-13.252,63.425,84.153)
O4': (-14.148,62.946,83.161)
C5': (-14.108,62.382,80.803)
P: (-12.780,60.390,79.735)
O2: (-12.194,63.685,86.627)
C4': (-13.698,63.386,81.854)
C2': (-12.136,64.186,83.433)
O2': (-12.423,65.570,83.439)
N1: (-12.753,62.281,84.932)
N3: (-11.756,61.483,86.933)
N4: (-11.327,59.253,87.195)
C6: (-12.799,61.009,84.433)
C5: (-12.338,59.970,85.145)
O3': (-11.661,64.446,81.053)
OP1: (-13.540,60.771,78.517)
OP2: (-11.307,60.575,79.769)
C4: (-11.803,60.245,86.438)
O5': (-13.402,61.161,80.983)
C3': (-12.203,63.576,82.039)
C1': (-13.252,63.425,84.153)
O4': (-14.148,62.946,83.161)
C5': (-14.108,62.382,80.803)
P: (-12.780,60.390,79.735)
O2: (-12.194,63.685,86.627)
C4': (-13.698,63.386,81.854)
C2': (-12.136,64.186,83.433)
O2': (-12.423,65.570,83.439)
N1: (-12.753,62.281,84.932)
N3: (-11.756,61.483,86.933)
N4: (-11.327,59.253,87.195)
C6: (-12.799,61.009,84.433)
C5: (-12.338,59.970,85.145)
O3': (-11.661,64.446,81.053)
C4: (-16.798,54.749,84.618)
N3: (-17.327,55.277,83.458)
OP1: (-9.321,57.024,84.524)
OP2: (-11.378,56.408,85.925)
C2: (-16.645,55.937,82.464)
C1': (-14.501,56.788,81.668)
C3': (-12.724,58.320,81.329)
O5': (-11.543,56.672,83.455)
O4': (-13.361,56.016,81.360)
C5': (-11.117,56.494,82.109)
P: (-10.595,56.276,84.672)
C4': (-12.219,56.891,81.160)
C2': (-13.988,58.142,82.160)
O2': (-14.937,59.173,81.974)
N1: (-15.287,56.070,82.680)
O4: (-17.544,54.190,85.424)
O2: (-17.202,56.367,81.468)
C6: (-14.695,55.559,83.811)
C5: (-15.386,54.922,84.763)
O3': (-13.069,58.845,80.055)
N3: (-17.327,55.277,83.458)
OP1: (-9.321,57.024,84.524)
OP2: (-11.378,56.408,85.925)
C2: (-16.645,55.937,82.464)
C1': (-14.501,56.788,81.668)
C3': (-12.724,58.320,81.329)
O5': (-11.543,56.672,83.455)
O4': (-13.361,56.016,81.360)
C5': (-11.117,56.494,82.109)
P: (-10.595,56.276,84.672)
C4': (-12.219,56.891,81.160)
C2': (-13.988,58.142,82.160)
O2': (-14.937,59.173,81.974)
N1: (-15.287,56.070,82.680)
O4: (-17.544,54.190,85.424)
O2: (-17.202,56.367,81.468)
C6: (-14.695,55.559,83.811)
C5: (-15.386,54.922,84.763)
O3': (-13.069,58.845,80.055)
Image (generated by PyMOL):