Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.905 104.680 117.259 1.00 47.20 O
ATOM 2 P C A1088 44.960 104.940 118.843 1.00 51.51 P
ATOM 3 OP1 C A1088 44.358 106.284 119.134 1.00 49.97 O
ATOM 4 OP2 C A1088 46.362 104.649 119.293 1.00 51.21 O
ATOM 5 O5' C A1088 44.015 103.793 119.428 1.00 49.45 O
ATOM 6 C5' C A1088 42.681 104.085 119.897 1.00 49.54 C
ATOM 7 C4' C A1088 42.089 102.867 120.560 1.00 49.39 C
ATOM 8 O4' C A1088 41.883 101.832 119.565 1.00 47.73 O
ATOM 9 C3' C A1088 42.980 102.217 121.608 1.00 50.78 C
ATOM 10 O3' C A1088 42.835 102.844 122.882 1.00 51.21 O
ATOM 11 C2' C A1088 42.465 100.782 121.624 1.00 51.09 C
ATOM 12 O2' C A1088 41.297 100.645 122.413 1.00 53.11 O
ATOM 13 C1' C A1088 42.128 100.558 120.143 1.00 48.97 C
ATOM 14 N1 C A1088 43.180 99.864 119.359 1.00 48.52 N
ATOM 15 C2 C A1088 43.393 98.490 119.573 1.00 48.85 C
ATOM 16 O2 C A1088 42.686 97.889 120.401 1.00 52.69 O
ATOM 17 N3 C A1088 44.363 97.849 118.869 1.00 47.40 N
ATOM 18 C4 C A1088 45.098 98.520 117.979 1.00 45.31 C
ATOM 19 N4 C A1088 46.041 97.847 117.313 1.00 40.56 N
ATOM 20 C5 C A1088 44.899 99.913 117.734 1.00 46.04 C
ATOM 21 C6 C A1088 43.940 100.539 118.439 1.00 48.23 C
ATOM 22 P U A1089 44.025 103.758 123.476 1.00 54.60 P
ATOM 23 OP1 U A1089 43.586 104.194 124.833 1.00 54.90 O
ATOM 24 OP2 U A1089 44.381 104.787 122.451 1.00 52.49 O
ATOM 25 O5' U A1089 45.261 102.762 123.653 1.00 53.25 O
TER
ATOM 1 O3' C B1086 49.613 100.622 114.879 1.00 43.09 O
ATOM 2 P U B1087 48.400 100.293 115.885 1.00 43.32 P
ATOM 3 OP1 U B1087 48.950 100.216 117.265 1.00 43.66 O
ATOM 4 OP2 U B1087 47.627 99.147 115.334 1.00 39.73 O
ATOM 5 O5' U B1087 47.467 101.576 115.811 1.00 42.90 O
ATOM 6 C5' U B1087 47.930 102.852 116.251 1.00 42.68 C
ATOM 7 C4' U B1087 46.835 103.869 116.076 1.00 45.07 C
ATOM 8 O4' U B1087 46.552 104.008 114.650 1.00 45.82 O
ATOM 9 C3' U B1087 45.500 103.506 116.731 1.00 45.54 C
ATOM 10 O3' U B1087 44.905 104.680 117.259 1.00 47.20 O
ATOM 11 C2' U B1087 44.673 102.991 115.557 1.00 44.58 C
ATOM 12 O2' U B1087 43.287 103.148 115.751 1.00 44.54 O
ATOM 13 C1' U B1087 45.162 103.905 114.442 1.00 43.61 C
ATOM 14 N1 U B1087 44.910 103.448 113.066 1.00 42.70 N
ATOM 15 C2 U B1087 44.274 104.339 112.214 1.00 41.94 C
ATOM 16 O2 U B1087 43.939 105.458 112.553 1.00 43.29 O
ATOM 17 N3 U B1087 44.042 103.872 110.949 1.00 42.14 N
ATOM 18 C4 U B1087 44.367 102.634 110.449 1.00 42.27 C
ATOM 19 O4 U B1087 44.076 102.366 109.277 1.00 43.43 O
ATOM 20 C5 U B1087 45.033 101.765 111.383 1.00 42.30 C
ATOM 21 C6 U B1087 45.276 102.193 112.629 1.00 42.11 C
ATOM 22 P C B1088 44.960 104.940 118.843 1.00 51.51 P
ATOM 23 OP1 C B1088 44.358 106.284 119.134 1.00 49.97 O
ATOM 24 OP2 C B1088 46.362 104.649 119.293 1.00 51.21 O
ATOM 25 O5' C B1088 44.015 103.793 119.428 1.00 49.45 O
TER
ATOM 2 P C A1088 44.960 104.940 118.843 1.00 51.51 P
ATOM 3 OP1 C A1088 44.358 106.284 119.134 1.00 49.97 O
ATOM 4 OP2 C A1088 46.362 104.649 119.293 1.00 51.21 O
ATOM 5 O5' C A1088 44.015 103.793 119.428 1.00 49.45 O
ATOM 6 C5' C A1088 42.681 104.085 119.897 1.00 49.54 C
ATOM 7 C4' C A1088 42.089 102.867 120.560 1.00 49.39 C
ATOM 8 O4' C A1088 41.883 101.832 119.565 1.00 47.73 O
ATOM 9 C3' C A1088 42.980 102.217 121.608 1.00 50.78 C
ATOM 10 O3' C A1088 42.835 102.844 122.882 1.00 51.21 O
ATOM 11 C2' C A1088 42.465 100.782 121.624 1.00 51.09 C
ATOM 12 O2' C A1088 41.297 100.645 122.413 1.00 53.11 O
ATOM 13 C1' C A1088 42.128 100.558 120.143 1.00 48.97 C
ATOM 14 N1 C A1088 43.180 99.864 119.359 1.00 48.52 N
ATOM 15 C2 C A1088 43.393 98.490 119.573 1.00 48.85 C
ATOM 16 O2 C A1088 42.686 97.889 120.401 1.00 52.69 O
ATOM 17 N3 C A1088 44.363 97.849 118.869 1.00 47.40 N
ATOM 18 C4 C A1088 45.098 98.520 117.979 1.00 45.31 C
ATOM 19 N4 C A1088 46.041 97.847 117.313 1.00 40.56 N
ATOM 20 C5 C A1088 44.899 99.913 117.734 1.00 46.04 C
ATOM 21 C6 C A1088 43.940 100.539 118.439 1.00 48.23 C
ATOM 22 P U A1089 44.025 103.758 123.476 1.00 54.60 P
ATOM 23 OP1 U A1089 43.586 104.194 124.833 1.00 54.90 O
ATOM 24 OP2 U A1089 44.381 104.787 122.451 1.00 52.49 O
ATOM 25 O5' U A1089 45.261 102.762 123.653 1.00 53.25 O
TER
ATOM 1 O3' C B1086 49.613 100.622 114.879 1.00 43.09 O
ATOM 2 P U B1087 48.400 100.293 115.885 1.00 43.32 P
ATOM 3 OP1 U B1087 48.950 100.216 117.265 1.00 43.66 O
ATOM 4 OP2 U B1087 47.627 99.147 115.334 1.00 39.73 O
ATOM 5 O5' U B1087 47.467 101.576 115.811 1.00 42.90 O
ATOM 6 C5' U B1087 47.930 102.852 116.251 1.00 42.68 C
ATOM 7 C4' U B1087 46.835 103.869 116.076 1.00 45.07 C
ATOM 8 O4' U B1087 46.552 104.008 114.650 1.00 45.82 O
ATOM 9 C3' U B1087 45.500 103.506 116.731 1.00 45.54 C
ATOM 10 O3' U B1087 44.905 104.680 117.259 1.00 47.20 O
ATOM 11 C2' U B1087 44.673 102.991 115.557 1.00 44.58 C
ATOM 12 O2' U B1087 43.287 103.148 115.751 1.00 44.54 O
ATOM 13 C1' U B1087 45.162 103.905 114.442 1.00 43.61 C
ATOM 14 N1 U B1087 44.910 103.448 113.066 1.00 42.70 N
ATOM 15 C2 U B1087 44.274 104.339 112.214 1.00 41.94 C
ATOM 16 O2 U B1087 43.939 105.458 112.553 1.00 43.29 O
ATOM 17 N3 U B1087 44.042 103.872 110.949 1.00 42.14 N
ATOM 18 C4 U B1087 44.367 102.634 110.449 1.00 42.27 C
ATOM 19 O4 U B1087 44.076 102.366 109.277 1.00 43.43 O
ATOM 20 C5 U B1087 45.033 101.765 111.383 1.00 42.30 C
ATOM 21 C6 U B1087 45.276 102.193 112.629 1.00 42.11 C
ATOM 22 P C B1088 44.960 104.940 118.843 1.00 51.51 P
ATOM 23 OP1 C B1088 44.358 106.284 119.134 1.00 49.97 O
ATOM 24 OP2 C B1088 46.362 104.649 119.293 1.00 51.21 O
ATOM 25 O5' C B1088 44.015 103.793 119.428 1.00 49.45 O
TER
Atoms:
C2: (43.393,98.490,119.573)
OP1: (44.358,106.284,119.134)
OP2: (46.362,104.649,119.293)
C4: (45.098,98.520,117.979)
O5': (44.015,103.793,119.428)
C3': (42.980,102.217,121.608)
C1': (42.128,100.558,120.143)
O4': (41.883,101.832,119.565)
C5': (42.681,104.085,119.897)
P: (44.960,104.940,118.843)
O2: (42.686,97.889,120.401)
C4': (42.089,102.867,120.560)
C2': (42.465,100.782,121.624)
O2': (41.297,100.645,122.413)
N1: (43.180,99.864,119.359)
N3: (44.363,97.849,118.869)
N4: (46.041,97.847,117.313)
C6: (43.940,100.539,118.439)
C5: (44.899,99.913,117.734)
O3': (42.835,102.844,122.882)
OP1: (44.358,106.284,119.134)
OP2: (46.362,104.649,119.293)
C4: (45.098,98.520,117.979)
O5': (44.015,103.793,119.428)
C3': (42.980,102.217,121.608)
C1': (42.128,100.558,120.143)
O4': (41.883,101.832,119.565)
C5': (42.681,104.085,119.897)
P: (44.960,104.940,118.843)
O2: (42.686,97.889,120.401)
C4': (42.089,102.867,120.560)
C2': (42.465,100.782,121.624)
O2': (41.297,100.645,122.413)
N1: (43.180,99.864,119.359)
N3: (44.363,97.849,118.869)
N4: (46.041,97.847,117.313)
C6: (43.940,100.539,118.439)
C5: (44.899,99.913,117.734)
O3': (42.835,102.844,122.882)
C4: (44.367,102.634,110.449)
N3: (44.042,103.872,110.949)
OP1: (48.950,100.216,117.265)
OP2: (47.627,99.147,115.334)
C2: (44.274,104.339,112.214)
C1': (45.162,103.905,114.442)
C3': (45.500,103.506,116.731)
O5': (47.467,101.576,115.811)
O4': (46.552,104.008,114.650)
C5': (47.930,102.852,116.251)
P: (48.400,100.293,115.885)
C4': (46.835,103.869,116.076)
C2': (44.673,102.991,115.557)
O2': (43.287,103.148,115.751)
N1: (44.910,103.448,113.066)
O4: (44.076,102.366,109.277)
O2: (43.939,105.458,112.553)
C6: (45.276,102.193,112.629)
C5: (45.033,101.765,111.383)
O3': (44.905,104.680,117.259)
N3: (44.042,103.872,110.949)
OP1: (48.950,100.216,117.265)
OP2: (47.627,99.147,115.334)
C2: (44.274,104.339,112.214)
C1': (45.162,103.905,114.442)
C3': (45.500,103.506,116.731)
O5': (47.467,101.576,115.811)
O4': (46.552,104.008,114.650)
C5': (47.930,102.852,116.251)
P: (48.400,100.293,115.885)
C4': (46.835,103.869,116.076)
C2': (44.673,102.991,115.557)
O2': (43.287,103.148,115.751)
N1: (44.910,103.448,113.066)
O4: (44.076,102.366,109.277)
O2: (43.939,105.458,112.553)
C6: (45.276,102.193,112.629)
C5: (45.033,101.765,111.383)
O3': (44.905,104.680,117.259)
Image (generated by PyMOL):