Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B34:B33
Extra
PDB:
ATOM 1 O3' U A 33 32.693 63.329 33.923 1.00115.95 O
ATOM 2 P C A 34 32.333 64.872 34.242 1.00121.34 P
ATOM 3 OP1 C A 34 33.318 65.722 33.525 1.00121.69 O
ATOM 4 OP2 C A 34 32.177 65.011 35.715 1.00116.25 O
ATOM 5 O5' C A 34 30.900 65.118 33.585 1.00116.97 O
ATOM 6 C5' C A 34 30.761 65.716 32.276 1.00106.94 C
ATOM 7 C4' C A 34 29.476 66.511 32.208 1.00 99.78 C
ATOM 8 O4' C A 34 28.387 65.639 32.613 1.00 90.67 O
ATOM 9 C3' C A 34 29.415 67.710 33.150 1.00 96.21 C
ATOM 10 O3' C A 34 28.496 68.684 32.644 1.00100.42 O
ATOM 11 C2' C A 34 28.839 67.086 34.416 1.00 90.79 C
ATOM 12 O2' C A 34 28.218 68.034 35.263 1.00 75.16 O
ATOM 13 C1' C A 34 27.820 66.112 33.820 1.00 94.40 C
ATOM 14 N1 C A 34 27.504 64.941 34.657 1.00 96.08 N
ATOM 15 C2 C A 34 26.502 65.047 35.628 1.00 96.05 C
ATOM 16 O2 C A 34 25.931 66.136 35.785 1.00103.32 O
ATOM 17 N3 C A 34 26.181 63.961 36.368 1.00 93.74 N
ATOM 18 C4 C A 34 26.820 62.806 36.169 1.00 93.82 C
ATOM 19 N4 C A 34 26.450 61.751 36.899 1.00 87.54 N
ATOM 20 C5 C A 34 27.861 62.678 35.206 1.00 95.58 C
ATOM 21 C6 C A 34 28.169 63.760 34.480 1.00 94.64 C
ATOM 22 P G A 35 28.876 69.563 31.350 1.00 98.67 P
ATOM 23 OP1 G A 35 30.340 69.801 31.370 1.00100.50 O
ATOM 24 OP2 G A 35 27.944 70.718 31.325 1.00 95.17 O
ATOM 25 O5' G A 35 28.514 68.625 30.106 1.00 95.58 O
TER
ATOM 1 O3' U B 32 28.734 58.487 35.714 1.00104.97 O
ATOM 2 P U B 33 29.460 59.486 36.749 1.00108.34 P
ATOM 3 OP1 U B 33 30.555 58.715 37.389 1.00107.72 O
ATOM 4 OP2 U B 33 28.413 60.121 37.597 1.00107.21 O
ATOM 5 O5' U B 33 30.098 60.608 35.811 1.00111.95 O
ATOM 6 C5' U B 33 30.661 60.246 34.535 1.00117.27 C
ATOM 7 C4' U B 33 31.889 61.073 34.231 1.00115.37 C
ATOM 8 O4' U B 33 32.738 60.299 33.347 1.00117.58 O
ATOM 9 C3' U B 33 31.663 62.416 33.540 1.00114.88 C
ATOM 10 O3' U B 33 32.693 63.329 33.923 1.00115.95 O
ATOM 11 C2' U B 33 31.803 62.044 32.062 1.00112.25 C
ATOM 12 O2' U B 33 32.247 63.116 31.254 1.00115.17 O
ATOM 13 C1' U B 33 32.887 60.971 32.115 1.00114.64 C
ATOM 14 N1 U B 33 32.792 59.970 31.042 1.00113.77 N
ATOM 15 C2 U B 33 32.108 58.792 31.308 1.00114.26 C
ATOM 16 O2 U B 33 31.552 58.570 32.373 1.00115.84 O
ATOM 17 N3 U B 33 32.098 57.882 30.277 1.00108.97 N
ATOM 18 C4 U B 33 32.674 58.030 29.031 1.00 99.16 C
ATOM 19 O4 U B 33 32.611 57.103 28.221 1.00 94.17 O
ATOM 20 C5 U B 33 33.336 59.281 28.825 1.00100.33 C
ATOM 21 C6 U B 33 33.371 60.187 29.813 1.00111.62 C
ATOM 22 P C B 34 32.333 64.872 34.242 1.00121.34 P
ATOM 23 OP1 C B 34 33.318 65.722 33.525 1.00121.69 O
ATOM 24 OP2 C B 34 32.177 65.011 35.715 1.00116.25 O
ATOM 25 O5' C B 34 30.900 65.118 33.585 1.00116.97 O
TER
ATOM 2 P C A 34 32.333 64.872 34.242 1.00121.34 P
ATOM 3 OP1 C A 34 33.318 65.722 33.525 1.00121.69 O
ATOM 4 OP2 C A 34 32.177 65.011 35.715 1.00116.25 O
ATOM 5 O5' C A 34 30.900 65.118 33.585 1.00116.97 O
ATOM 6 C5' C A 34 30.761 65.716 32.276 1.00106.94 C
ATOM 7 C4' C A 34 29.476 66.511 32.208 1.00 99.78 C
ATOM 8 O4' C A 34 28.387 65.639 32.613 1.00 90.67 O
ATOM 9 C3' C A 34 29.415 67.710 33.150 1.00 96.21 C
ATOM 10 O3' C A 34 28.496 68.684 32.644 1.00100.42 O
ATOM 11 C2' C A 34 28.839 67.086 34.416 1.00 90.79 C
ATOM 12 O2' C A 34 28.218 68.034 35.263 1.00 75.16 O
ATOM 13 C1' C A 34 27.820 66.112 33.820 1.00 94.40 C
ATOM 14 N1 C A 34 27.504 64.941 34.657 1.00 96.08 N
ATOM 15 C2 C A 34 26.502 65.047 35.628 1.00 96.05 C
ATOM 16 O2 C A 34 25.931 66.136 35.785 1.00103.32 O
ATOM 17 N3 C A 34 26.181 63.961 36.368 1.00 93.74 N
ATOM 18 C4 C A 34 26.820 62.806 36.169 1.00 93.82 C
ATOM 19 N4 C A 34 26.450 61.751 36.899 1.00 87.54 N
ATOM 20 C5 C A 34 27.861 62.678 35.206 1.00 95.58 C
ATOM 21 C6 C A 34 28.169 63.760 34.480 1.00 94.64 C
ATOM 22 P G A 35 28.876 69.563 31.350 1.00 98.67 P
ATOM 23 OP1 G A 35 30.340 69.801 31.370 1.00100.50 O
ATOM 24 OP2 G A 35 27.944 70.718 31.325 1.00 95.17 O
ATOM 25 O5' G A 35 28.514 68.625 30.106 1.00 95.58 O
TER
ATOM 1 O3' U B 32 28.734 58.487 35.714 1.00104.97 O
ATOM 2 P U B 33 29.460 59.486 36.749 1.00108.34 P
ATOM 3 OP1 U B 33 30.555 58.715 37.389 1.00107.72 O
ATOM 4 OP2 U B 33 28.413 60.121 37.597 1.00107.21 O
ATOM 5 O5' U B 33 30.098 60.608 35.811 1.00111.95 O
ATOM 6 C5' U B 33 30.661 60.246 34.535 1.00117.27 C
ATOM 7 C4' U B 33 31.889 61.073 34.231 1.00115.37 C
ATOM 8 O4' U B 33 32.738 60.299 33.347 1.00117.58 O
ATOM 9 C3' U B 33 31.663 62.416 33.540 1.00114.88 C
ATOM 10 O3' U B 33 32.693 63.329 33.923 1.00115.95 O
ATOM 11 C2' U B 33 31.803 62.044 32.062 1.00112.25 C
ATOM 12 O2' U B 33 32.247 63.116 31.254 1.00115.17 O
ATOM 13 C1' U B 33 32.887 60.971 32.115 1.00114.64 C
ATOM 14 N1 U B 33 32.792 59.970 31.042 1.00113.77 N
ATOM 15 C2 U B 33 32.108 58.792 31.308 1.00114.26 C
ATOM 16 O2 U B 33 31.552 58.570 32.373 1.00115.84 O
ATOM 17 N3 U B 33 32.098 57.882 30.277 1.00108.97 N
ATOM 18 C4 U B 33 32.674 58.030 29.031 1.00 99.16 C
ATOM 19 O4 U B 33 32.611 57.103 28.221 1.00 94.17 O
ATOM 20 C5 U B 33 33.336 59.281 28.825 1.00100.33 C
ATOM 21 C6 U B 33 33.371 60.187 29.813 1.00111.62 C
ATOM 22 P C B 34 32.333 64.872 34.242 1.00121.34 P
ATOM 23 OP1 C B 34 33.318 65.722 33.525 1.00121.69 O
ATOM 24 OP2 C B 34 32.177 65.011 35.715 1.00116.25 O
ATOM 25 O5' C B 34 30.900 65.118 33.585 1.00116.97 O
TER
Atoms:
C2: (26.502,65.047,35.628)
OP1: (33.318,65.722,33.525)
OP2: (32.177,65.011,35.715)
C4: (26.820,62.806,36.169)
O5': (30.900,65.118,33.585)
C3': (29.415,67.710,33.150)
C1': (27.820,66.112,33.820)
O4': (28.387,65.639,32.613)
C5': (30.761,65.716,32.276)
P: (32.333,64.872,34.242)
O2: (25.931,66.136,35.785)
C4': (29.476,66.511,32.208)
C2': (28.839,67.086,34.416)
O2': (28.218,68.034,35.263)
N1: (27.504,64.941,34.657)
N3: (26.181,63.961,36.368)
N4: (26.450,61.751,36.899)
C6: (28.169,63.760,34.480)
C5: (27.861,62.678,35.206)
O3': (28.496,68.684,32.644)
OP1: (33.318,65.722,33.525)
OP2: (32.177,65.011,35.715)
C4: (26.820,62.806,36.169)
O5': (30.900,65.118,33.585)
C3': (29.415,67.710,33.150)
C1': (27.820,66.112,33.820)
O4': (28.387,65.639,32.613)
C5': (30.761,65.716,32.276)
P: (32.333,64.872,34.242)
O2: (25.931,66.136,35.785)
C4': (29.476,66.511,32.208)
C2': (28.839,67.086,34.416)
O2': (28.218,68.034,35.263)
N1: (27.504,64.941,34.657)
N3: (26.181,63.961,36.368)
N4: (26.450,61.751,36.899)
C6: (28.169,63.760,34.480)
C5: (27.861,62.678,35.206)
O3': (28.496,68.684,32.644)
C4: (32.674,58.030,29.031)
N3: (32.098,57.882,30.277)
OP1: (30.555,58.715,37.389)
OP2: (28.413,60.121,37.597)
C2: (32.108,58.792,31.308)
C1': (32.887,60.971,32.115)
C3': (31.663,62.416,33.540)
O5': (30.098,60.608,35.811)
O4': (32.738,60.299,33.347)
C5': (30.661,60.246,34.535)
P: (29.460,59.486,36.749)
C4': (31.889,61.073,34.231)
C2': (31.803,62.044,32.062)
O2': (32.247,63.116,31.254)
N1: (32.792,59.970,31.042)
O4: (32.611,57.103,28.221)
O2: (31.552,58.570,32.373)
C6: (33.371,60.187,29.813)
C5: (33.336,59.281,28.825)
O3': (32.693,63.329,33.923)
N3: (32.098,57.882,30.277)
OP1: (30.555,58.715,37.389)
OP2: (28.413,60.121,37.597)
C2: (32.108,58.792,31.308)
C1': (32.887,60.971,32.115)
C3': (31.663,62.416,33.540)
O5': (30.098,60.608,35.811)
O4': (32.738,60.299,33.347)
C5': (30.661,60.246,34.535)
P: (29.460,59.486,36.749)
C4': (31.889,61.073,34.231)
C2': (31.803,62.044,32.062)
O2': (32.247,63.116,31.254)
N1: (32.792,59.970,31.042)
O4: (32.611,57.103,28.221)
O2: (31.552,58.570,32.373)
C6: (33.371,60.187,29.813)
C5: (33.336,59.281,28.825)
O3': (32.693,63.329,33.923)
Image (generated by PyMOL):