Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1335:A1334
Extra
PDB:
ATOM 1 O3' U A1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 2 P C A1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 3 OP1 C A1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 4 OP2 C A1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 5 O5' C A1335 -105.019 95.097 71.713 1.00 38.96 O
ATOM 6 C5' C A1335 -104.974 95.412 73.110 1.00 36.69 C
ATOM 7 C4' C A1335 -105.857 96.605 73.415 1.00 34.74 C
ATOM 8 O4' C A1335 -105.332 97.788 72.759 1.00 33.07 O
ATOM 9 C3' C A1335 -107.306 96.513 72.953 1.00 34.21 C
ATOM 10 O3' C A1335 -108.112 95.765 73.870 1.00 35.41 O
ATOM 11 C2' C A1335 -107.714 97.983 72.831 1.00 32.24 C
ATOM 12 O2' C A1335 -108.089 98.572 74.064 1.00 32.42 O
ATOM 13 C1' C A1335 -106.407 98.636 72.379 1.00 30.59 C
ATOM 14 N1 C A1335 -106.315 98.918 70.929 1.00 66.37 N
ATOM 15 C2 C A1335 -106.892 100.105 70.425 1.00 66.00 C
ATOM 16 O2 C A1335 -107.502 100.865 71.200 1.00 68.41 O
ATOM 17 N3 C A1335 -106.768 100.388 69.106 1.00 63.42 N
ATOM 18 C4 C A1335 -106.111 99.547 68.299 1.00 63.06 C
ATOM 19 N4 C A1335 -105.992 99.881 67.010 1.00 62.38 N
ATOM 20 C5 C A1335 -105.542 98.330 68.779 1.00 62.58 C
ATOM 21 C6 C A1335 -105.667 98.058 70.085 1.00 64.74 C
ATOM 22 P A A1336 -109.498 95.119 73.365 1.00 79.77 P
ATOM 23 OP1 A A1336 -109.936 94.088 74.343 1.00 69.03 O
ATOM 24 OP2 A A1336 -109.340 94.754 71.925 1.00 68.69 O
ATOM 25 O5' A A1336 -110.526 96.332 73.446 1.00 51.29 O
TER
ATOM 1 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 2 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 3 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 4 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 5 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
ATOM 6 C5' U B1334 -101.624 96.456 68.304 1.00 41.75 C
ATOM 7 C4' U B1334 -101.383 96.916 69.717 1.00 41.51 C
ATOM 8 O4' U B1334 -101.084 98.328 69.713 1.00 40.96 O
ATOM 9 C3' U B1334 -102.584 96.783 70.647 1.00 40.98 C
ATOM 10 O3' U B1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 11 C2' U B1334 -102.345 97.868 71.701 1.00 40.79 C
ATOM 12 O2' U B1334 -101.684 97.392 72.853 1.00 41.36 O
ATOM 13 C1' U B1334 -101.441 98.870 70.968 1.00 41.23 C
ATOM 14 N1 U B1334 -102.013 100.216 70.794 1.00 78.00 N
ATOM 15 C2 U B1334 -101.710 101.173 71.757 1.00 78.63 C
ATOM 16 O2 U B1334 -100.942 100.969 72.685 1.00 77.45 O
ATOM 17 N3 U B1334 -102.336 102.380 71.592 1.00 78.70 N
ATOM 18 C4 U B1334 -103.198 102.733 70.582 1.00 79.46 C
ATOM 19 O4 U B1334 -103.744 103.838 70.611 1.00 81.68 O
ATOM 20 C5 U B1334 -103.422 101.712 69.605 1.00 78.40 C
ATOM 21 C6 U B1334 -102.838 100.520 69.741 1.00 78.29 C
ATOM 22 P C B1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 23 OP1 C B1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 24 OP2 C B1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 25 O5' C B1335 -105.019 95.097 71.713 1.00 38.96 O
TER
ATOM 2 P C A1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 3 OP1 C A1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 4 OP2 C A1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 5 O5' C A1335 -105.019 95.097 71.713 1.00 38.96 O
ATOM 6 C5' C A1335 -104.974 95.412 73.110 1.00 36.69 C
ATOM 7 C4' C A1335 -105.857 96.605 73.415 1.00 34.74 C
ATOM 8 O4' C A1335 -105.332 97.788 72.759 1.00 33.07 O
ATOM 9 C3' C A1335 -107.306 96.513 72.953 1.00 34.21 C
ATOM 10 O3' C A1335 -108.112 95.765 73.870 1.00 35.41 O
ATOM 11 C2' C A1335 -107.714 97.983 72.831 1.00 32.24 C
ATOM 12 O2' C A1335 -108.089 98.572 74.064 1.00 32.42 O
ATOM 13 C1' C A1335 -106.407 98.636 72.379 1.00 30.59 C
ATOM 14 N1 C A1335 -106.315 98.918 70.929 1.00 66.37 N
ATOM 15 C2 C A1335 -106.892 100.105 70.425 1.00 66.00 C
ATOM 16 O2 C A1335 -107.502 100.865 71.200 1.00 68.41 O
ATOM 17 N3 C A1335 -106.768 100.388 69.106 1.00 63.42 N
ATOM 18 C4 C A1335 -106.111 99.547 68.299 1.00 63.06 C
ATOM 19 N4 C A1335 -105.992 99.881 67.010 1.00 62.38 N
ATOM 20 C5 C A1335 -105.542 98.330 68.779 1.00 62.58 C
ATOM 21 C6 C A1335 -105.667 98.058 70.085 1.00 64.74 C
ATOM 22 P A A1336 -109.498 95.119 73.365 1.00 79.77 P
ATOM 23 OP1 A A1336 -109.936 94.088 74.343 1.00 69.03 O
ATOM 24 OP2 A A1336 -109.340 94.754 71.925 1.00 68.69 O
ATOM 25 O5' A A1336 -110.526 96.332 73.446 1.00 51.29 O
TER
ATOM 1 O3' A B1333 -101.846 98.191 65.761 1.00 39.85 O
ATOM 2 P U B1334 -103.047 97.244 66.238 1.00 43.01 P
ATOM 3 OP1 U B1334 -102.839 95.922 65.594 1.00 57.69 O
ATOM 4 OP2 U B1334 -104.323 97.975 66.030 1.00 57.79 O
ATOM 5 O5' U B1334 -102.816 97.063 67.798 1.00 41.94 O
ATOM 6 C5' U B1334 -101.624 96.456 68.304 1.00 41.75 C
ATOM 7 C4' U B1334 -101.383 96.916 69.717 1.00 41.51 C
ATOM 8 O4' U B1334 -101.084 98.328 69.713 1.00 40.96 O
ATOM 9 C3' U B1334 -102.584 96.783 70.647 1.00 40.98 C
ATOM 10 O3' U B1334 -102.573 95.487 71.266 1.00 41.03 O
ATOM 11 C2' U B1334 -102.345 97.868 71.701 1.00 40.79 C
ATOM 12 O2' U B1334 -101.684 97.392 72.853 1.00 41.36 O
ATOM 13 C1' U B1334 -101.441 98.870 70.968 1.00 41.23 C
ATOM 14 N1 U B1334 -102.013 100.216 70.794 1.00 78.00 N
ATOM 15 C2 U B1334 -101.710 101.173 71.757 1.00 78.63 C
ATOM 16 O2 U B1334 -100.942 100.969 72.685 1.00 77.45 O
ATOM 17 N3 U B1334 -102.336 102.380 71.592 1.00 78.70 N
ATOM 18 C4 U B1334 -103.198 102.733 70.582 1.00 79.46 C
ATOM 19 O4 U B1334 -103.744 103.838 70.611 1.00 81.68 O
ATOM 20 C5 U B1334 -103.422 101.712 69.605 1.00 78.40 C
ATOM 21 C6 U B1334 -102.838 100.520 69.741 1.00 78.29 C
ATOM 22 P C B1335 -103.767 94.438 70.995 1.00 60.89 P
ATOM 23 OP1 C B1335 -103.430 93.193 71.732 1.00103.91 O
ATOM 24 OP2 C B1335 -104.036 94.378 69.531 1.00105.49 O
ATOM 25 O5' C B1335 -105.019 95.097 71.713 1.00 38.96 O
TER
Atoms:
C2: (-106.892,100.105,70.425)
OP1: (-103.430,93.193,71.732)
OP2: (-104.036,94.378,69.531)
C4: (-106.111,99.547,68.299)
O5': (-105.019,95.097,71.713)
C3': (-107.306,96.513,72.953)
C1': (-106.407,98.636,72.379)
O4': (-105.332,97.788,72.759)
C5': (-104.974,95.412,73.110)
P: (-103.767,94.438,70.995)
O2: (-107.502,100.865,71.200)
C4': (-105.857,96.605,73.415)
C2': (-107.714,97.983,72.831)
O2': (-108.089,98.572,74.064)
N1: (-106.315,98.918,70.929)
N3: (-106.768,100.388,69.106)
N4: (-105.992,99.881,67.010)
C6: (-105.667,98.058,70.085)
C5: (-105.542,98.330,68.779)
O3': (-108.112,95.765,73.870)
OP1: (-103.430,93.193,71.732)
OP2: (-104.036,94.378,69.531)
C4: (-106.111,99.547,68.299)
O5': (-105.019,95.097,71.713)
C3': (-107.306,96.513,72.953)
C1': (-106.407,98.636,72.379)
O4': (-105.332,97.788,72.759)
C5': (-104.974,95.412,73.110)
P: (-103.767,94.438,70.995)
O2: (-107.502,100.865,71.200)
C4': (-105.857,96.605,73.415)
C2': (-107.714,97.983,72.831)
O2': (-108.089,98.572,74.064)
N1: (-106.315,98.918,70.929)
N3: (-106.768,100.388,69.106)
N4: (-105.992,99.881,67.010)
C6: (-105.667,98.058,70.085)
C5: (-105.542,98.330,68.779)
O3': (-108.112,95.765,73.870)
C4: (-103.198,102.733,70.582)
N3: (-102.336,102.380,71.592)
OP1: (-102.839,95.922,65.594)
OP2: (-104.323,97.975,66.030)
C2: (-101.710,101.173,71.757)
C1': (-101.441,98.870,70.968)
C3': (-102.584,96.783,70.647)
O5': (-102.816,97.063,67.798)
O4': (-101.084,98.328,69.713)
C5': (-101.624,96.456,68.304)
P: (-103.047,97.244,66.238)
C4': (-101.383,96.916,69.717)
C2': (-102.345,97.868,71.701)
O2': (-101.684,97.392,72.853)
N1: (-102.013,100.216,70.794)
O4: (-103.744,103.838,70.611)
O2: (-100.942,100.969,72.685)
C6: (-102.838,100.520,69.741)
C5: (-103.422,101.712,69.605)
O3': (-102.573,95.487,71.266)
N3: (-102.336,102.380,71.592)
OP1: (-102.839,95.922,65.594)
OP2: (-104.323,97.975,66.030)
C2: (-101.710,101.173,71.757)
C1': (-101.441,98.870,70.968)
C3': (-102.584,96.783,70.647)
O5': (-102.816,97.063,67.798)
O4': (-101.084,98.328,69.713)
C5': (-101.624,96.456,68.304)
P: (-103.047,97.244,66.238)
C4': (-101.383,96.916,69.717)
C2': (-102.345,97.868,71.701)
O2': (-101.684,97.392,72.853)
N1: (-102.013,100.216,70.794)
O4: (-103.744,103.838,70.611)
O2: (-100.942,100.969,72.685)
C6: (-102.838,100.520,69.741)
C5: (-103.422,101.712,69.605)
O3': (-102.573,95.487,71.266)
Image (generated by PyMOL):