Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DRA:B19:B18
Extra
PDB:
ATOM 1 O3' U A 18 -7.627 1.882 -14.649 1.00 54.95 O
ATOM 2 P C A 19 -7.414 0.642 -13.647 1.00 51.77 P
ATOM 3 OP1 C A 19 -6.196 0.803 -12.822 1.00 49.27 O
ATOM 4 OP2 C A 19 -7.536 -0.543 -14.530 1.00 54.30 O
ATOM 5 O5' C A 19 -8.701 0.627 -12.715 1.00 49.40 O
ATOM 6 C5' C A 19 -8.921 -0.456 -11.819 1.00 45.28 C
ATOM 7 C4' C A 19 -10.267 -1.082 -12.078 1.00 43.51 C
ATOM 8 O4' C A 19 -11.275 -0.037 -11.998 1.00 42.83 O
ATOM 9 C3' C A 19 -10.485 -1.689 -13.458 1.00 41.71 C
ATOM 10 O3' C A 19 -10.013 -3.031 -13.542 1.00 39.05 O
ATOM 11 C2' C A 19 -12.001 -1.665 -13.563 1.00 42.34 C
ATOM 12 O2' C A 19 -12.590 -2.704 -12.806 1.00 42.46 O
ATOM 13 C1' C A 19 -12.321 -0.318 -12.914 1.00 41.87 C
ATOM 14 N1 C A 19 -12.402 0.782 -13.888 1.00 40.37 N
ATOM 15 C2 C A 19 -13.545 0.882 -14.671 1.00 40.29 C
ATOM 16 O2 C A 19 -14.425 0.022 -14.545 1.00 39.86 O
ATOM 17 N3 C A 19 -13.664 1.907 -15.546 1.00 40.99 N
ATOM 18 C4 C A 19 -12.683 2.805 -15.658 1.00 39.92 C
ATOM 19 N4 C A 19 -12.850 3.807 -16.528 1.00 37.74 N
ATOM 20 C5 C A 19 -11.490 2.715 -14.883 1.00 38.94 C
ATOM 21 C6 C A 19 -11.392 1.695 -14.019 1.00 39.97 C
ATOM 22 P C A 20 -9.726 -3.692 -14.988 1.00 38.14 P
ATOM 23 OP1 C A 20 -9.117 -5.029 -14.770 1.00 36.97 O
ATOM 24 OP2 C A 20 -9.017 -2.695 -15.839 1.00 38.60 O
ATOM 25 O5' C A 20 -11.175 -3.896 -15.617 1.00 35.20 O
TER
ATOM 1 O3' U B 17 -9.131 6.662 -18.143 1.00 59.46 O
ATOM 2 P U B 18 -9.817 5.430 -17.357 1.00 55.91 P
ATOM 3 OP1 U B 18 -9.815 4.274 -18.293 1.00 57.55 O
ATOM 4 OP2 U B 18 -11.096 5.890 -16.767 1.00 55.94 O
ATOM 5 O5' U B 18 -8.820 5.098 -16.165 1.00 54.65 O
ATOM 6 C5' U B 18 -7.598 4.414 -16.411 1.00 55.17 C
ATOM 7 C4' U B 18 -6.939 4.063 -15.104 1.00 55.55 C
ATOM 8 O4' U B 18 -6.620 5.269 -14.382 1.00 55.81 O
ATOM 9 C3' U B 18 -7.800 3.231 -14.172 1.00 56.22 C
ATOM 10 O3' U B 18 -7.627 1.882 -14.649 1.00 54.95 O
ATOM 11 C2' U B 18 -7.298 3.621 -12.776 1.00 56.39 C
ATOM 12 O2' U B 18 -6.221 2.846 -12.304 1.00 59.12 O
ATOM 13 C1' U B 18 -6.773 5.048 -13.001 1.00 56.14 C
ATOM 14 N1 U B 18 -7.512 6.191 -12.445 1.00 56.61 N
ATOM 15 C2 U B 18 -7.266 6.537 -11.131 1.00 57.53 C
ATOM 16 O2 U B 18 -6.523 5.895 -10.408 1.00 58.31 O
ATOM 17 N3 U B 18 -7.920 7.663 -10.694 1.00 56.55 N
ATOM 18 C4 U B 18 -8.785 8.454 -11.420 1.00 56.88 C
ATOM 19 O4 U B 18 -9.248 9.473 -10.905 1.00 55.97 O
ATOM 20 C5 U B 18 -9.015 8.010 -12.763 1.00 56.42 C
ATOM 21 C6 U B 18 -8.388 6.919 -13.216 1.00 56.65 C
ATOM 22 P C B 19 -7.414 0.642 -13.647 1.00 51.77 P
ATOM 23 OP1 C B 19 -6.196 0.803 -12.822 1.00 49.27 O
ATOM 24 OP2 C B 19 -7.536 -0.543 -14.530 1.00 54.30 O
ATOM 25 O5' C B 19 -8.701 0.627 -12.715 1.00 49.40 O
TER
ATOM 2 P C A 19 -7.414 0.642 -13.647 1.00 51.77 P
ATOM 3 OP1 C A 19 -6.196 0.803 -12.822 1.00 49.27 O
ATOM 4 OP2 C A 19 -7.536 -0.543 -14.530 1.00 54.30 O
ATOM 5 O5' C A 19 -8.701 0.627 -12.715 1.00 49.40 O
ATOM 6 C5' C A 19 -8.921 -0.456 -11.819 1.00 45.28 C
ATOM 7 C4' C A 19 -10.267 -1.082 -12.078 1.00 43.51 C
ATOM 8 O4' C A 19 -11.275 -0.037 -11.998 1.00 42.83 O
ATOM 9 C3' C A 19 -10.485 -1.689 -13.458 1.00 41.71 C
ATOM 10 O3' C A 19 -10.013 -3.031 -13.542 1.00 39.05 O
ATOM 11 C2' C A 19 -12.001 -1.665 -13.563 1.00 42.34 C
ATOM 12 O2' C A 19 -12.590 -2.704 -12.806 1.00 42.46 O
ATOM 13 C1' C A 19 -12.321 -0.318 -12.914 1.00 41.87 C
ATOM 14 N1 C A 19 -12.402 0.782 -13.888 1.00 40.37 N
ATOM 15 C2 C A 19 -13.545 0.882 -14.671 1.00 40.29 C
ATOM 16 O2 C A 19 -14.425 0.022 -14.545 1.00 39.86 O
ATOM 17 N3 C A 19 -13.664 1.907 -15.546 1.00 40.99 N
ATOM 18 C4 C A 19 -12.683 2.805 -15.658 1.00 39.92 C
ATOM 19 N4 C A 19 -12.850 3.807 -16.528 1.00 37.74 N
ATOM 20 C5 C A 19 -11.490 2.715 -14.883 1.00 38.94 C
ATOM 21 C6 C A 19 -11.392 1.695 -14.019 1.00 39.97 C
ATOM 22 P C A 20 -9.726 -3.692 -14.988 1.00 38.14 P
ATOM 23 OP1 C A 20 -9.117 -5.029 -14.770 1.00 36.97 O
ATOM 24 OP2 C A 20 -9.017 -2.695 -15.839 1.00 38.60 O
ATOM 25 O5' C A 20 -11.175 -3.896 -15.617 1.00 35.20 O
TER
ATOM 1 O3' U B 17 -9.131 6.662 -18.143 1.00 59.46 O
ATOM 2 P U B 18 -9.817 5.430 -17.357 1.00 55.91 P
ATOM 3 OP1 U B 18 -9.815 4.274 -18.293 1.00 57.55 O
ATOM 4 OP2 U B 18 -11.096 5.890 -16.767 1.00 55.94 O
ATOM 5 O5' U B 18 -8.820 5.098 -16.165 1.00 54.65 O
ATOM 6 C5' U B 18 -7.598 4.414 -16.411 1.00 55.17 C
ATOM 7 C4' U B 18 -6.939 4.063 -15.104 1.00 55.55 C
ATOM 8 O4' U B 18 -6.620 5.269 -14.382 1.00 55.81 O
ATOM 9 C3' U B 18 -7.800 3.231 -14.172 1.00 56.22 C
ATOM 10 O3' U B 18 -7.627 1.882 -14.649 1.00 54.95 O
ATOM 11 C2' U B 18 -7.298 3.621 -12.776 1.00 56.39 C
ATOM 12 O2' U B 18 -6.221 2.846 -12.304 1.00 59.12 O
ATOM 13 C1' U B 18 -6.773 5.048 -13.001 1.00 56.14 C
ATOM 14 N1 U B 18 -7.512 6.191 -12.445 1.00 56.61 N
ATOM 15 C2 U B 18 -7.266 6.537 -11.131 1.00 57.53 C
ATOM 16 O2 U B 18 -6.523 5.895 -10.408 1.00 58.31 O
ATOM 17 N3 U B 18 -7.920 7.663 -10.694 1.00 56.55 N
ATOM 18 C4 U B 18 -8.785 8.454 -11.420 1.00 56.88 C
ATOM 19 O4 U B 18 -9.248 9.473 -10.905 1.00 55.97 O
ATOM 20 C5 U B 18 -9.015 8.010 -12.763 1.00 56.42 C
ATOM 21 C6 U B 18 -8.388 6.919 -13.216 1.00 56.65 C
ATOM 22 P C B 19 -7.414 0.642 -13.647 1.00 51.77 P
ATOM 23 OP1 C B 19 -6.196 0.803 -12.822 1.00 49.27 O
ATOM 24 OP2 C B 19 -7.536 -0.543 -14.530 1.00 54.30 O
ATOM 25 O5' C B 19 -8.701 0.627 -12.715 1.00 49.40 O
TER
Atoms:
C2: (-13.545,0.882,-14.671)
OP1: (-6.196,0.803,-12.822)
OP2: (-7.536,-0.543,-14.530)
C4: (-12.683,2.805,-15.658)
O5': (-8.701,0.627,-12.715)
C3': (-10.485,-1.689,-13.458)
C1': (-12.321,-0.318,-12.914)
O4': (-11.275,-0.037,-11.998)
C5': (-8.921,-0.456,-11.819)
P: (-7.414,0.642,-13.647)
O2: (-14.425,0.022,-14.545)
C4': (-10.267,-1.082,-12.078)
C2': (-12.001,-1.665,-13.563)
O2': (-12.590,-2.704,-12.806)
N1: (-12.402,0.782,-13.888)
N3: (-13.664,1.907,-15.546)
N4: (-12.850,3.807,-16.528)
C6: (-11.392,1.695,-14.019)
C5: (-11.490,2.715,-14.883)
O3': (-10.013,-3.031,-13.542)
OP1: (-6.196,0.803,-12.822)
OP2: (-7.536,-0.543,-14.530)
C4: (-12.683,2.805,-15.658)
O5': (-8.701,0.627,-12.715)
C3': (-10.485,-1.689,-13.458)
C1': (-12.321,-0.318,-12.914)
O4': (-11.275,-0.037,-11.998)
C5': (-8.921,-0.456,-11.819)
P: (-7.414,0.642,-13.647)
O2: (-14.425,0.022,-14.545)
C4': (-10.267,-1.082,-12.078)
C2': (-12.001,-1.665,-13.563)
O2': (-12.590,-2.704,-12.806)
N1: (-12.402,0.782,-13.888)
N3: (-13.664,1.907,-15.546)
N4: (-12.850,3.807,-16.528)
C6: (-11.392,1.695,-14.019)
C5: (-11.490,2.715,-14.883)
O3': (-10.013,-3.031,-13.542)
C4: (-8.785,8.454,-11.420)
N3: (-7.920,7.663,-10.694)
OP1: (-9.815,4.274,-18.293)
OP2: (-11.096,5.890,-16.767)
C2: (-7.266,6.537,-11.131)
C1': (-6.773,5.048,-13.001)
C3': (-7.800,3.231,-14.172)
O5': (-8.820,5.098,-16.165)
O4': (-6.620,5.269,-14.382)
C5': (-7.598,4.414,-16.411)
P: (-9.817,5.430,-17.357)
C4': (-6.939,4.063,-15.104)
C2': (-7.298,3.621,-12.776)
O2': (-6.221,2.846,-12.304)
N1: (-7.512,6.191,-12.445)
O4: (-9.248,9.473,-10.905)
O2: (-6.523,5.895,-10.408)
C6: (-8.388,6.919,-13.216)
C5: (-9.015,8.010,-12.763)
O3': (-7.627,1.882,-14.649)
N3: (-7.920,7.663,-10.694)
OP1: (-9.815,4.274,-18.293)
OP2: (-11.096,5.890,-16.767)
C2: (-7.266,6.537,-11.131)
C1': (-6.773,5.048,-13.001)
C3': (-7.800,3.231,-14.172)
O5': (-8.820,5.098,-16.165)
O4': (-6.620,5.269,-14.382)
C5': (-7.598,4.414,-16.411)
P: (-9.817,5.430,-17.357)
C4': (-6.939,4.063,-15.104)
C2': (-7.298,3.621,-12.776)
O2': (-6.221,2.846,-12.304)
N1: (-7.512,6.191,-12.445)
O4: (-9.248,9.473,-10.905)
O2: (-6.523,5.895,-10.408)
C6: (-8.388,6.919,-13.216)
C5: (-9.015,8.010,-12.763)
O3': (-7.627,1.882,-14.649)
Image (generated by PyMOL):