Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1687:A1686
Extra
PDB:
ATOM 1 O3' U A1686 -8.134 109.297 117.547 1.00 1.02 O
ATOM 2 P C A1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 3 OP1 C A1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 4 OP2 C A1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 5 O5' C A1687 -6.307 107.777 116.802 1.00 7.72 O
ATOM 6 C5' C A1687 -5.168 107.692 117.650 1.00 7.72 C
ATOM 7 C4' C A1687 -4.757 106.270 117.880 1.00 7.72 C
ATOM 8 O4' C A1687 -5.947 105.463 118.047 1.00 7.72 O
ATOM 9 C3' C A1687 -3.979 105.639 116.733 1.00 7.72 C
ATOM 10 O3' C A1687 -3.006 104.716 117.246 1.00 7.72 O
ATOM 11 C2' C A1687 -5.059 104.883 115.979 1.00 7.72 C
ATOM 12 O2' C A1687 -4.590 103.799 115.217 1.00 7.72 O
ATOM 13 C1' C A1687 -5.926 104.407 117.116 1.00 7.72 C
ATOM 14 N1 C A1687 -7.300 104.088 116.724 1.00 7.85 N
ATOM 15 C2 C A1687 -7.737 102.763 116.854 1.00 7.85 C
ATOM 16 O2 C A1687 -6.982 101.893 117.290 1.00 7.85 O
ATOM 17 N3 C A1687 -8.987 102.433 116.522 1.00 7.85 N
ATOM 18 C4 C A1687 -9.786 103.379 116.051 1.00 7.85 C
ATOM 19 N4 C A1687 -11.019 102.992 115.721 1.00 7.85 N
ATOM 20 C5 C A1687 -9.365 104.737 115.891 1.00 7.85 C
ATOM 21 C6 C A1687 -8.114 105.057 116.238 1.00 7.85 C
ATOM 22 P G A1688 -1.501 105.211 117.594 1.00 10.50 P
ATOM 23 OP1 G A1688 -1.085 106.184 116.549 1.00 10.50 O
ATOM 24 OP2 G A1688 -0.682 103.994 117.812 1.00 10.50 O
ATOM 25 O5' G A1688 -1.689 105.958 118.977 1.00 10.50 O
TER
ATOM 1 O3' U B1685 -13.354 106.107 117.559 1.00 2.41 O
ATOM 2 P U B1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 3 OP1 U B1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 4 OP2 U B1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 5 O5' U B1686 -11.414 107.055 116.332 1.00 1.02 O
ATOM 6 C5' U B1686 -10.897 108.047 115.470 1.00 1.02 C
ATOM 7 C4' U B1686 -10.158 109.084 116.248 1.00 1.02 C
ATOM 8 O4' U B1686 -11.125 109.978 116.871 1.00 1.02 O
ATOM 9 C3' U B1686 -9.305 108.517 117.384 1.00 1.02 C
ATOM 10 O3' U B1686 -8.134 109.297 117.547 1.00 1.02 O
ATOM 11 C2' U B1686 -10.198 108.701 118.598 1.00 1.02 C
ATOM 12 O2' U B1686 -9.507 108.793 119.822 1.00 1.02 O
ATOM 13 C1' U B1686 -10.900 110.003 118.262 1.00 1.02 C
ATOM 14 N1 U B1686 -12.162 110.144 118.928 1.00 1.19 N
ATOM 15 C2 U B1686 -12.291 111.240 119.738 1.00 1.19 C
ATOM 16 O2 U B1686 -11.420 112.077 119.867 1.00 1.19 O
ATOM 17 N3 U B1686 -13.490 111.332 120.384 1.00 1.19 N
ATOM 18 C4 U B1686 -14.522 110.424 120.310 1.00 1.19 C
ATOM 19 O4 U B1686 -15.531 110.658 120.979 1.00 1.19 O
ATOM 20 C5 U B1686 -14.284 109.282 119.456 1.00 1.19 C
ATOM 21 C6 U B1686 -13.116 109.181 118.813 1.00 1.19 C
ATOM 22 P C B1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 23 OP1 C B1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 24 OP2 C B1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 25 O5' C B1687 -6.307 107.777 116.802 1.00 7.72 O
TER
ATOM 2 P C A1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 3 OP1 C A1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 4 OP2 C A1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 5 O5' C A1687 -6.307 107.777 116.802 1.00 7.72 O
ATOM 6 C5' C A1687 -5.168 107.692 117.650 1.00 7.72 C
ATOM 7 C4' C A1687 -4.757 106.270 117.880 1.00 7.72 C
ATOM 8 O4' C A1687 -5.947 105.463 118.047 1.00 7.72 O
ATOM 9 C3' C A1687 -3.979 105.639 116.733 1.00 7.72 C
ATOM 10 O3' C A1687 -3.006 104.716 117.246 1.00 7.72 O
ATOM 11 C2' C A1687 -5.059 104.883 115.979 1.00 7.72 C
ATOM 12 O2' C A1687 -4.590 103.799 115.217 1.00 7.72 O
ATOM 13 C1' C A1687 -5.926 104.407 117.116 1.00 7.72 C
ATOM 14 N1 C A1687 -7.300 104.088 116.724 1.00 7.85 N
ATOM 15 C2 C A1687 -7.737 102.763 116.854 1.00 7.85 C
ATOM 16 O2 C A1687 -6.982 101.893 117.290 1.00 7.85 O
ATOM 17 N3 C A1687 -8.987 102.433 116.522 1.00 7.85 N
ATOM 18 C4 C A1687 -9.786 103.379 116.051 1.00 7.85 C
ATOM 19 N4 C A1687 -11.019 102.992 115.721 1.00 7.85 N
ATOM 20 C5 C A1687 -9.365 104.737 115.891 1.00 7.85 C
ATOM 21 C6 C A1687 -8.114 105.057 116.238 1.00 7.85 C
ATOM 22 P G A1688 -1.501 105.211 117.594 1.00 10.50 P
ATOM 23 OP1 G A1688 -1.085 106.184 116.549 1.00 10.50 O
ATOM 24 OP2 G A1688 -0.682 103.994 117.812 1.00 10.50 O
ATOM 25 O5' G A1688 -1.689 105.958 118.977 1.00 10.50 O
TER
ATOM 1 O3' U B1685 -13.354 106.107 117.559 1.00 2.41 O
ATOM 2 P U B1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 3 OP1 U B1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 4 OP2 U B1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 5 O5' U B1686 -11.414 107.055 116.332 1.00 1.02 O
ATOM 6 C5' U B1686 -10.897 108.047 115.470 1.00 1.02 C
ATOM 7 C4' U B1686 -10.158 109.084 116.248 1.00 1.02 C
ATOM 8 O4' U B1686 -11.125 109.978 116.871 1.00 1.02 O
ATOM 9 C3' U B1686 -9.305 108.517 117.384 1.00 1.02 C
ATOM 10 O3' U B1686 -8.134 109.297 117.547 1.00 1.02 O
ATOM 11 C2' U B1686 -10.198 108.701 118.598 1.00 1.02 C
ATOM 12 O2' U B1686 -9.507 108.793 119.822 1.00 1.02 O
ATOM 13 C1' U B1686 -10.900 110.003 118.262 1.00 1.02 C
ATOM 14 N1 U B1686 -12.162 110.144 118.928 1.00 1.19 N
ATOM 15 C2 U B1686 -12.291 111.240 119.738 1.00 1.19 C
ATOM 16 O2 U B1686 -11.420 112.077 119.867 1.00 1.19 O
ATOM 17 N3 U B1686 -13.490 111.332 120.384 1.00 1.19 N
ATOM 18 C4 U B1686 -14.522 110.424 120.310 1.00 1.19 C
ATOM 19 O4 U B1686 -15.531 110.658 120.979 1.00 1.19 O
ATOM 20 C5 U B1686 -14.284 109.282 119.456 1.00 1.19 C
ATOM 21 C6 U B1686 -13.116 109.181 118.813 1.00 1.19 C
ATOM 22 P C B1687 -6.957 109.195 116.482 1.00 7.72 P
ATOM 23 OP1 C B1687 -5.988 110.279 116.816 1.00 7.72 O
ATOM 24 OP2 C B1687 -7.588 109.177 115.132 1.00 7.72 O
ATOM 25 O5' C B1687 -6.307 107.777 116.802 1.00 7.72 O
TER
Atoms:
C2: (-7.737,102.763,116.854)
OP1: (-5.988,110.279,116.816)
OP2: (-7.588,109.177,115.132)
C4: (-9.786,103.379,116.051)
O5': (-6.307,107.777,116.802)
C3': (-3.979,105.639,116.733)
C1': (-5.926,104.407,117.116)
O4': (-5.947,105.463,118.047)
C5': (-5.168,107.692,117.650)
P: (-6.957,109.195,116.482)
O2: (-6.982,101.893,117.290)
C4': (-4.757,106.270,117.880)
C2': (-5.059,104.883,115.979)
O2': (-4.590,103.799,115.217)
N1: (-7.300,104.088,116.724)
N3: (-8.987,102.433,116.522)
N4: (-11.019,102.992,115.721)
C6: (-8.114,105.057,116.238)
C5: (-9.365,104.737,115.891)
O3': (-3.006,104.716,117.246)
OP1: (-5.988,110.279,116.816)
OP2: (-7.588,109.177,115.132)
C4: (-9.786,103.379,116.051)
O5': (-6.307,107.777,116.802)
C3': (-3.979,105.639,116.733)
C1': (-5.926,104.407,117.116)
O4': (-5.947,105.463,118.047)
C5': (-5.168,107.692,117.650)
P: (-6.957,109.195,116.482)
O2: (-6.982,101.893,117.290)
C4': (-4.757,106.270,117.880)
C2': (-5.059,104.883,115.979)
O2': (-4.590,103.799,115.217)
N1: (-7.300,104.088,116.724)
N3: (-8.987,102.433,116.522)
N4: (-11.019,102.992,115.721)
C6: (-8.114,105.057,116.238)
C5: (-9.365,104.737,115.891)
O3': (-3.006,104.716,117.246)
C4: (-14.522,110.424,120.310)
N3: (-13.490,111.332,120.384)
OP1: (-13.748,107.454,115.508)
OP2: (-12.688,105.136,115.382)
C2: (-12.291,111.240,119.738)
C1': (-10.900,110.003,118.262)
C3': (-9.305,108.517,117.384)
O5': (-11.414,107.055,116.332)
O4': (-11.125,109.978,116.871)
C5': (-10.897,108.047,115.470)
P: (-12.837,106.428,116.078)
C4': (-10.158,109.084,116.248)
C2': (-10.198,108.701,118.598)
O2': (-9.507,108.793,119.822)
N1: (-12.162,110.144,118.928)
O4: (-15.531,110.658,120.979)
O2: (-11.420,112.077,119.867)
C6: (-13.116,109.181,118.813)
C5: (-14.284,109.282,119.456)
O3': (-8.134,109.297,117.547)
N3: (-13.490,111.332,120.384)
OP1: (-13.748,107.454,115.508)
OP2: (-12.688,105.136,115.382)
C2: (-12.291,111.240,119.738)
C1': (-10.900,110.003,118.262)
C3': (-9.305,108.517,117.384)
O5': (-11.414,107.055,116.332)
O4': (-11.125,109.978,116.871)
C5': (-10.897,108.047,115.470)
P: (-12.837,106.428,116.078)
C4': (-10.158,109.084,116.248)
C2': (-10.198,108.701,118.598)
O2': (-9.507,108.793,119.822)
N1: (-12.162,110.144,118.928)
O4: (-15.531,110.658,120.979)
O2: (-11.420,112.077,119.867)
C6: (-13.116,109.181,118.813)
C5: (-14.284,109.282,119.456)
O3': (-8.134,109.297,117.547)
Image (generated by PyMOL):