Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01085:01084
Extra
PDB:
ATOM 1 O3' U A1084 42.429 94.588 115.158 1.00 49.11 O
ATOM 2 P C A1085 43.764 95.225 115.777 1.00 50.41 P
ATOM 3 OP1 C A1085 44.836 94.237 115.501 1.00 49.28 O
ATOM 4 OP2 C A1085 43.500 95.656 117.175 1.00 50.83 O
ATOM 5 O5' C A1085 44.013 96.534 114.905 1.00 50.73 O
ATOM 6 C5' C A1085 43.985 96.478 113.465 1.00 53.62 C
ATOM 7 C4' C A1085 44.049 97.869 112.885 1.00 53.91 C
ATOM 8 O4' C A1085 42.901 98.626 113.353 1.00 55.40 O
ATOM 9 C3' C A1085 45.274 98.686 113.270 1.00 54.14 C
ATOM 10 O3' C A1085 45.607 99.542 112.187 1.00 52.91 O
ATOM 11 C2' C A1085 44.792 99.462 114.492 1.00 54.46 C
ATOM 12 O2' C A1085 45.486 100.675 114.693 1.00 54.61 O
ATOM 13 C1' C A1085 43.330 99.725 114.135 1.00 55.22 C
ATOM 14 N1 C A1085 42.428 99.824 115.300 1.00 55.83 N
ATOM 15 C2 C A1085 41.634 100.972 115.454 1.00 56.26 C
ATOM 16 O2 C A1085 41.750 101.905 114.643 1.00 58.79 O
ATOM 17 N3 C A1085 40.767 101.040 116.487 1.00 56.39 N
ATOM 18 C4 C A1085 40.684 100.032 117.358 1.00 56.87 C
ATOM 19 N4 C A1085 39.803 100.140 118.356 1.00 57.55 N
ATOM 20 C5 C A1085 41.498 98.866 117.244 1.00 56.90 C
ATOM 21 C6 C A1085 42.347 98.804 116.211 1.00 56.89 C
ATOM 22 P C A1086 47.024 99.369 111.446 1.00 54.05 P
ATOM 23 OP1 C A1086 46.884 99.967 110.095 1.00 54.87 O
ATOM 24 OP2 C A1086 47.504 97.964 111.579 1.00 52.36 O
ATOM 25 O5' C A1086 47.982 100.317 112.283 1.00 52.42 O
TER
ATOM 1 O3' A B1083 38.305 95.209 119.586 1.00 40.45 O
ATOM 2 P U B1084 39.680 95.997 119.436 1.00 39.55 P
ATOM 3 OP1 U B1084 40.639 95.336 120.362 1.00 39.43 O
ATOM 4 OP2 U B1084 39.396 97.447 119.577 1.00 36.82 O
ATOM 5 O5' U B1084 40.094 95.712 117.929 1.00 38.49 O
ATOM 6 C5' U B1084 40.152 94.370 117.423 1.00 41.95 C
ATOM 7 C4' U B1084 40.147 94.383 115.913 1.00 45.70 C
ATOM 8 O4' U B1084 38.881 94.896 115.432 1.00 45.91 O
ATOM 9 C3' U B1084 41.191 95.282 115.269 1.00 47.17 C
ATOM 10 O3' U B1084 42.429 94.588 115.158 1.00 49.11 O
ATOM 11 C2' U B1084 40.585 95.555 113.901 1.00 46.32 C
ATOM 12 O2' U B1084 40.785 94.466 113.022 1.00 49.00 O
ATOM 13 C1' U B1084 39.094 95.628 114.238 1.00 45.30 C
ATOM 14 N1 U B1084 38.539 96.978 114.408 1.00 43.75 N
ATOM 15 C2 U B1084 38.172 97.674 113.270 1.00 44.59 C
ATOM 16 O2 U B1084 38.339 97.243 112.139 1.00 47.29 O
ATOM 17 N3 U B1084 37.602 98.898 113.500 1.00 42.53 N
ATOM 18 C4 U B1084 37.373 99.484 114.718 1.00 44.01 C
ATOM 19 O4 U B1084 36.768 100.553 114.767 1.00 47.83 O
ATOM 20 C5 U B1084 37.809 98.718 115.839 1.00 42.90 C
ATOM 21 C6 U B1084 38.365 97.525 115.651 1.00 42.69 C
ATOM 22 P C B1085 43.764 95.225 115.777 1.00 50.41 P
ATOM 23 OP1 C B1085 44.836 94.237 115.501 1.00 49.28 O
ATOM 24 OP2 C B1085 43.500 95.656 117.175 1.00 50.83 O
ATOM 25 O5' C B1085 44.013 96.534 114.905 1.00 50.73 O
TER
ATOM 2 P C A1085 43.764 95.225 115.777 1.00 50.41 P
ATOM 3 OP1 C A1085 44.836 94.237 115.501 1.00 49.28 O
ATOM 4 OP2 C A1085 43.500 95.656 117.175 1.00 50.83 O
ATOM 5 O5' C A1085 44.013 96.534 114.905 1.00 50.73 O
ATOM 6 C5' C A1085 43.985 96.478 113.465 1.00 53.62 C
ATOM 7 C4' C A1085 44.049 97.869 112.885 1.00 53.91 C
ATOM 8 O4' C A1085 42.901 98.626 113.353 1.00 55.40 O
ATOM 9 C3' C A1085 45.274 98.686 113.270 1.00 54.14 C
ATOM 10 O3' C A1085 45.607 99.542 112.187 1.00 52.91 O
ATOM 11 C2' C A1085 44.792 99.462 114.492 1.00 54.46 C
ATOM 12 O2' C A1085 45.486 100.675 114.693 1.00 54.61 O
ATOM 13 C1' C A1085 43.330 99.725 114.135 1.00 55.22 C
ATOM 14 N1 C A1085 42.428 99.824 115.300 1.00 55.83 N
ATOM 15 C2 C A1085 41.634 100.972 115.454 1.00 56.26 C
ATOM 16 O2 C A1085 41.750 101.905 114.643 1.00 58.79 O
ATOM 17 N3 C A1085 40.767 101.040 116.487 1.00 56.39 N
ATOM 18 C4 C A1085 40.684 100.032 117.358 1.00 56.87 C
ATOM 19 N4 C A1085 39.803 100.140 118.356 1.00 57.55 N
ATOM 20 C5 C A1085 41.498 98.866 117.244 1.00 56.90 C
ATOM 21 C6 C A1085 42.347 98.804 116.211 1.00 56.89 C
ATOM 22 P C A1086 47.024 99.369 111.446 1.00 54.05 P
ATOM 23 OP1 C A1086 46.884 99.967 110.095 1.00 54.87 O
ATOM 24 OP2 C A1086 47.504 97.964 111.579 1.00 52.36 O
ATOM 25 O5' C A1086 47.982 100.317 112.283 1.00 52.42 O
TER
ATOM 1 O3' A B1083 38.305 95.209 119.586 1.00 40.45 O
ATOM 2 P U B1084 39.680 95.997 119.436 1.00 39.55 P
ATOM 3 OP1 U B1084 40.639 95.336 120.362 1.00 39.43 O
ATOM 4 OP2 U B1084 39.396 97.447 119.577 1.00 36.82 O
ATOM 5 O5' U B1084 40.094 95.712 117.929 1.00 38.49 O
ATOM 6 C5' U B1084 40.152 94.370 117.423 1.00 41.95 C
ATOM 7 C4' U B1084 40.147 94.383 115.913 1.00 45.70 C
ATOM 8 O4' U B1084 38.881 94.896 115.432 1.00 45.91 O
ATOM 9 C3' U B1084 41.191 95.282 115.269 1.00 47.17 C
ATOM 10 O3' U B1084 42.429 94.588 115.158 1.00 49.11 O
ATOM 11 C2' U B1084 40.585 95.555 113.901 1.00 46.32 C
ATOM 12 O2' U B1084 40.785 94.466 113.022 1.00 49.00 O
ATOM 13 C1' U B1084 39.094 95.628 114.238 1.00 45.30 C
ATOM 14 N1 U B1084 38.539 96.978 114.408 1.00 43.75 N
ATOM 15 C2 U B1084 38.172 97.674 113.270 1.00 44.59 C
ATOM 16 O2 U B1084 38.339 97.243 112.139 1.00 47.29 O
ATOM 17 N3 U B1084 37.602 98.898 113.500 1.00 42.53 N
ATOM 18 C4 U B1084 37.373 99.484 114.718 1.00 44.01 C
ATOM 19 O4 U B1084 36.768 100.553 114.767 1.00 47.83 O
ATOM 20 C5 U B1084 37.809 98.718 115.839 1.00 42.90 C
ATOM 21 C6 U B1084 38.365 97.525 115.651 1.00 42.69 C
ATOM 22 P C B1085 43.764 95.225 115.777 1.00 50.41 P
ATOM 23 OP1 C B1085 44.836 94.237 115.501 1.00 49.28 O
ATOM 24 OP2 C B1085 43.500 95.656 117.175 1.00 50.83 O
ATOM 25 O5' C B1085 44.013 96.534 114.905 1.00 50.73 O
TER
Atoms:
C2: (41.634,100.972,115.454)
OP1: (44.836,94.237,115.501)
OP2: (43.500,95.656,117.175)
C4: (40.684,100.032,117.358)
O5': (44.013,96.534,114.905)
C3': (45.274,98.686,113.270)
C1': (43.330,99.725,114.135)
O4': (42.901,98.626,113.353)
C5': (43.985,96.478,113.465)
P: (43.764,95.225,115.777)
O2: (41.750,101.905,114.643)
C4': (44.049,97.869,112.885)
C2': (44.792,99.462,114.492)
O2': (45.486,100.675,114.693)
N1: (42.428,99.824,115.300)
N3: (40.767,101.040,116.487)
N4: (39.803,100.140,118.356)
C6: (42.347,98.804,116.211)
C5: (41.498,98.866,117.244)
O3': (45.607,99.542,112.187)
OP1: (44.836,94.237,115.501)
OP2: (43.500,95.656,117.175)
C4: (40.684,100.032,117.358)
O5': (44.013,96.534,114.905)
C3': (45.274,98.686,113.270)
C1': (43.330,99.725,114.135)
O4': (42.901,98.626,113.353)
C5': (43.985,96.478,113.465)
P: (43.764,95.225,115.777)
O2: (41.750,101.905,114.643)
C4': (44.049,97.869,112.885)
C2': (44.792,99.462,114.492)
O2': (45.486,100.675,114.693)
N1: (42.428,99.824,115.300)
N3: (40.767,101.040,116.487)
N4: (39.803,100.140,118.356)
C6: (42.347,98.804,116.211)
C5: (41.498,98.866,117.244)
O3': (45.607,99.542,112.187)
C4: (37.373,99.484,114.718)
N3: (37.602,98.898,113.500)
OP1: (40.639,95.336,120.362)
OP2: (39.396,97.447,119.577)
C2: (38.172,97.674,113.270)
C1': (39.094,95.628,114.238)
C3': (41.191,95.282,115.269)
O5': (40.094,95.712,117.929)
O4': (38.881,94.896,115.432)
C5': (40.152,94.370,117.423)
P: (39.680,95.997,119.436)
C4': (40.147,94.383,115.913)
C2': (40.585,95.555,113.901)
O2': (40.785,94.466,113.022)
N1: (38.539,96.978,114.408)
O4: (36.768,100.553,114.767)
O2: (38.339,97.243,112.139)
C6: (38.365,97.525,115.651)
C5: (37.809,98.718,115.839)
O3': (42.429,94.588,115.158)
N3: (37.602,98.898,113.500)
OP1: (40.639,95.336,120.362)
OP2: (39.396,97.447,119.577)
C2: (38.172,97.674,113.270)
C1': (39.094,95.628,114.238)
C3': (41.191,95.282,115.269)
O5': (40.094,95.712,117.929)
O4': (38.881,94.896,115.432)
C5': (40.152,94.370,117.423)
P: (39.680,95.997,119.436)
C4': (40.147,94.383,115.913)
C2': (40.585,95.555,113.901)
O2': (40.785,94.466,113.022)
N1: (38.539,96.978,114.408)
O4: (36.768,100.553,114.767)
O2: (38.339,97.243,112.139)
C6: (38.365,97.525,115.651)
C5: (37.809,98.718,115.839)
O3': (42.429,94.588,115.158)
Image (generated by PyMOL):